=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1_i386.buildinfo Source: r-base Version: 4.5.3-1 rebuilderd-worker node: infom08-amd64 +------------------------------------------------------------------------------+ | Downloading sources Wed, 11 Mar 2026 16:15:29 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [137 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [161 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2464 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [159 kB] Get:17 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [8308 B] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [10.5 kB] Get:20 https://deb.debian.org/debian sid/main Sources [11.4 MB] Get:21 https://deb.debian.org/debian experimental/main Sources [430 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2572 B] Fetched 34.3 MB in 2s (13.9 MB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.3-1.dsc' r-base_4.5.3-1.dsc 2879 SHA256:7ee579de273d3f40b2232ff3394db3c83e2ccac61388462ad5faf8d713c7cc4d 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.3.orig.tar.gz' r-base_4.5.3.orig.tar.gz 40518619 SHA256:aa5c1ed4293c7271ac513d654670356ac0e8a6ad5e42be014365d11150b5b8f2 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.3-1.debian.tar.xz' r-base_4.5.3-1.debian.tar.xz 101024 SHA256:388b174facc8fce08998e4c97ab522c377be94ba157a6fe326a3efa72cbb7718 aa5c1ed4293c7271ac513d654670356ac0e8a6ad5e42be014365d11150b5b8f2 r-base_4.5.3.orig.tar.gz 388b174facc8fce08998e4c97ab522c377be94ba157a6fe326a3efa72cbb7718 r-base_4.5.3-1.debian.tar.xz 7ee579de273d3f40b2232ff3394db3c83e2ccac61388462ad5faf8d713c7cc4d r-base_4.5.3-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Wed, 11 Mar 2026 16:15:33 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-base=4.5.3-1 in /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdwiQqd1/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1_i386.buildinfo /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1_i386.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/r-base-4.5.3 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260308T142930Z Debian13.3 InRelease [140 kB] Get:3 http://deb.debian.org/debian unstable/main i386 Packages [10.1 MB] Get:4 http://snapshot.debian.org/archive/debian/20260308T142930Z Debian13.3/main i386 Packages [9429 kB] Fetched 19.8 MB in 1s (13.3 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260308T142930Z/dists/Debian13.3/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: Conflicting distribution: http://snapshot.debian.org/archive/debian/20260308T142930Z Debian13.3 InRelease (expected Debian13.3 but got trixie) Get:1 http://deb.debian.org/debian unstable/main i386 tcl8.6-dev i386 8.6.17+dfsg-1+b1 [1125 kB] Fetched 1125 kB in 0s (70.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_a2ugb6d/tcl8.6-dev_8.6.17+dfsg-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.30-1 [53.2 kB] Fetched 53.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_suue4h/libthai0_0.1.30-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libidn2-dev i386 2.3.8-4+b1 [105 kB] Fetched 105 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6hpxpc45/libidn2-dev_2.3.8-4+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3o3g9tp/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 util-linux i386 2.41.3-4 [1198 kB] Fetched 1198 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcf_9gnwg/util-linux_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1+b1 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmw3r76v/libsharpyuv0_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpajj2dbf2/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcairo2-dev i386 1.18.4-3 [43.2 kB] Fetched 43.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuh8u_xht/libcairo2-dev_1.18.4-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.68.0-2 [85.9 kB] Fetched 85.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpspk42roc/libnghttp2-14_1.68.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libctf-nobfd0 i386 2.46-3 [161 kB] Fetched 161 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzqk1kma5/libctf-nobfd0_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1+b1 [29.1 kB] Fetched 29.1 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpdh75dmth/libxrender1_0.9.12-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libp11-kit-dev i386 0.26.2-2 [223 kB] Fetched 223 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptlklrz4o/libp11-kit-dev_0.26.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libctf0 i386 2.46-3 [96.7 kB] Fetched 96.7 kB in 0s (8532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3bswoqpd/libctf0_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.22.1-2 [359 kB] Fetched 359 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzvl3tbdh/libkrb5-3_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20251016-1 [98.5 kB] Fetched 98.5 kB in 0s (9695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbw32lahl/libedit2_3.1-20251016-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz-icu0 i386 12.3.2-2+b2 [13.6 kB] Fetched 13.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ip9k6ri/libharfbuzz-icu0_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsepol-dev i386 3.9-2 [409 kB] Fetched 409 kB in 0s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_8qceyx/libsepol-dev_3.9-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcomposite1 i386 1:0.4.6-1+b1 [16.9 kB] Fetched 16.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpdhoy6_ti/libxcomposite1_0.4.6-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtirpc3t64 i386 1.3.6+ds-1 [91.1 kB] Fetched 91.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmrjyv2bs/libtirpc3t64_1.3.6+ds-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgdbm6t64 i386 1.26-1+b1 [84.3 kB] Fetched 84.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcvgkyf40/libgdbm6t64_1.26-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (19.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy4wcsrl9/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtinfo6 i386 6.6+20251231-1 [354 kB] Fetched 354 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgz_l0bhp/libtinfo6_6.6+20251231-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xz-utils i386 5.8.2-2 [710 kB] Fetched 710 kB in 0s (57.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpitj13swu/xz-utils_5.8.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.22.1-2 [83.6 kB] Fetched 83.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpigr3e8a1/libk5crypto3_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev-bin i386 2.87.2-3 [58.1 kB] Fetched 58.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp17016np6/libglib2.0-dev-bin_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjo5iu_9b/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-5+b1 [338 kB] Fetched 338 kB in 0s (29.4 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmplkbe5no7/libmagic-mgc_5.46-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1+b1 [329 kB] Fetched 329 kB in 0s (31.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7zagbfcf/libwebp7_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.46-1+b1 [278 kB] Fetched 278 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2u_qa9b/libpcre2-16-0_10.46-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-18 [51.4 kB] Fetched 51.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa0njq3hu/libavahi-client3_0.8-18_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-10 [1207 kB] Fetched 1207 kB in 0s (98.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptnn1w21q/groff-base_1.23.0-10_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjpeg-dev i386 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_i386.deb' to '/srv/rebuilderd/tmp/tmplygsv6o_/libjpeg-dev_2.1.5-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libffi-dev i386 3.5.2-3+b1 [61.4 kB] Fetched 61.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplph4z0xb/libffi-dev_3.5.2-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxkbcommon0 i386 1.13.1-1 [154 kB] Fetched 154 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynar66c2/libxkbcommon0_1.13.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgnutls30t64 i386 3.8.12-3 [1508 kB] Fetched 1508 kB in 0s (114 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa8ysd19g/libgnutls30t64_3.8.12-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-6 [494 kB] Fetched 494 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp372tl88l/autoconf_2.72-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.131-1 [43.0 kB] Fetched 43.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwljb7n9z/libdrm2_2.4.131-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpxv0rx0gy/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 base-passwd i386 3.6.8 [55.1 kB] Fetched 55.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwztcdniq/base-passwd_3.6.8_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz-gobject0 i386 12.3.2-2+b2 [28.6 kB] Fetched 28.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpikp7gwe_/libharfbuzz-gobject0_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libepoxy0 i386 1.5.10-2+b1 [198 kB] Fetched 198 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpphzekrxn/libepoxy0_1.5.10-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.17.1-5 [56.0 kB] Fetched 56.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5rj0391k/fontconfig-config_2.17.1-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libreadline-dev i386 8.3-4 [175 kB] Fetched 175 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkzuw0jf/libreadline-dev_8.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtirpc-common all 1.3.6+ds-1 [11.0 kB] Fetched 11.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbvoaelq/libtirpc-common_1.3.6+ds-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 adwaita-icon-theme all 50~alpha-1 [508 kB] Fetched 508 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkdwx2r8/adwaita-icon-theme_50~alpha-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 mount i386 2.41.3-4 [171 kB] Fetched 171 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk2x6gzcd/mount_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxrender-dev i386 1:0.9.12-1+b1 [40.4 kB] Fetched 40.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrender-dev_1%3a0.9.12-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmphhmfkllr/libxrender-dev_0.9.12-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.13+ds-1 [304 kB] Fetched 304 kB in 0s (27.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0nqt0zkh/libteckit0_2.5.13+ds-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Fetched 10.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesr79t0c/libcommons-parent-java_56-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-2+b2 [107 kB] Fetched 107 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9xsqb9p/libxcb-dri3-0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libuuid1 i386 2.41.3-4 [40.5 kB] Fetched 40.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmkq_5iyf/libuuid1_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-glib-2.0-dev i386 2.87.2-3 [922 kB] Fetched 922 kB in 0s (91.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe8k4n849/gir1.2-glib-2.0-dev_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcsclite1 i386 2.4.1-1 [57.3 kB] Fetched 57.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldl0og8v/libpcsclite1_2.4.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgcc-15-dev i386 15.2.0-15 [2625 kB] Fetched 2625 kB in 0s (163 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzgvjgjtk/libgcc-15-dev_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgif7 i386 5.2.2-1+b2 [45.5 kB] Fetched 45.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplgfhufjt/libgif7_5.2.2-1+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7f3j9x8n/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcre2-posix3 i386 10.46-1+b1 [64.2 kB] Fetched 64.2 kB in 0s (2919 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2cckgyw/libpcre2-posix3_10.46-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkadm5srv-mit12 i386 1.22.1-2 [58.8 kB] Fetched 58.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgh7k1_ke/libkadm5srv-mit12_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.21.2-3 [19.1 kB] Fetched 19.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzszzhosw/libheif-plugin-libde265_1.21.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libthai-dev i386 0.1.30-1 [26.3 kB] Fetched 26.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr2_wx0l6/libthai-dev_0.1.30-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 librsvg2-2 i386 2.61.3+dfsg-3+b1 [1944 kB] Fetched 1944 kB in 0s (132 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7s_rug7g/librsvg2-2_2.61.3+dfsg-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.57.0-1 [37.1 kB] Fetched 37.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg4kv1q65/libpangocairo-1.0-0_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-2 [41.7 kB] Fetched 41.7 kB in 0s (4069 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpma46bk75/libpipeline1_1.5.8-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.194-1 [192 kB] Fetched 192 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjtuu0eou/libelf1t64_0.194-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnspr4 i386 2:4.38.2-1 [120 kB] Fetched 120 kB in 0s (0 B/s) dpkg-name: info: moved 'libnspr4_2%3a4.38.2-1_i386.deb' to '/srv/rebuilderd/tmp/tmpphy5vxaf/libnspr4_4.38.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblerc-dev i386 4.0.0+ds-5+b1 [203 kB] Fetched 203 kB in 0s (18.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp52yhmyl1/liblerc-dev_4.0.0+ds-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libblkid-dev i386 2.41.3-4 [235 kB] Fetched 235 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1t0yejau/libblkid-dev_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libc-dev-bin i386 2.42-13 [61.5 kB] Fetched 61.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptmahd4nz/libc-dev-bin_2.42-13_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.131-1 [68.3 kB] Fetched 68.3 kB in 0s (6026 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcd_5gjj/libdrm-intel1_2.4.131-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp0ontovpk/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (2376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqy5h3ywn/python3_3.13.9-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-2+b1 [69.2 kB] Fetched 69.2 kB in 0s (3415 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfe6g45nf/libuchardet0_0.0.8-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gtk-update-icon-cache i386 4.21.6+ds-1 [39.7 kB] Fetched 39.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumt0lncz/gtk-update-icon-cache_4.21.6+ds-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gfortran-i686-linux-gnu i386 4:15.2.0-5 [1276 B] Fetched 1276 B in 0s (0 B/s) dpkg-name: info: moved 'gfortran-i686-linux-gnu_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmpecrppw8o/gfortran-i686-linux-gnu_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-extra-utils all 2025.20260124-1 [70.7 MB] Fetched 70.7 MB in 1s (57.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_mvz1uj/texlive-extra-utils_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwayland-client0 i386 1.24.0-2+b2 [29.1 kB] Fetched 29.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprti0u26q/libwayland-client0_1.24.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc-15-base i386 15.2.0-15 [35.9 kB] Fetched 35.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyiijbj6r/gcc-15-base_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 binutils-i686-linux-gnu i386 2.46-3 [1121 kB] Fetched 1121 kB in 0s (92.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6lqdi66o/binutils-i686-linux-gnu_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libperl5.40 i386 5.40.1-7 [3962 kB] Fetched 3962 kB in 0s (180 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpusl4p8b6/libperl5.40_5.40.1-7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.17.1-5 [191 kB] Fetched 191 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6mn6fh5p/fontconfig_2.17.1-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1+b1 [9237 kB] Fetched 9237 kB in 0s (237 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxfi6vnm/libz3-4_4.13.3-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 default-jdk-headless i386 2:1.25-77 [1080 B] Fetched 1080 B in 0s (0 B/s) dpkg-name: info: moved 'default-jdk-headless_2%3a1.25-77_i386.deb' to '/srv/rebuilderd/tmp/tmpmf8kz7du/default-jdk-headless_1.25-77_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dconf-gsettings-backend i386 0.49.0-4 [32.3 kB] Fetched 32.3 kB in 0s (200 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdepdob5l/dconf-gsettings-backend_0.49.0-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libyaml-tiny-perl all 1.76-1 [29.8 kB] Fetched 29.8 kB in 0s (437 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_e9hy50/libyaml-tiny-perl_1.76-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libhwy1t64 i386 1.3.0-2 [846 kB] Fetched 846 kB in 0s (73.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8wou7ss9/libhwy1t64_1.3.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpksxxquig/xtrans-dev_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkadm5clnt-mit12 i386 1.22.1-2 [44.7 kB] Fetched 44.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrpdmz8h/libkadm5clnt-mit12_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 pkgconf i386 2.5.1-4 [33.6 kB] Fetched 33.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsxag0zlq/pkgconf_2.5.1-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus i386 1.16.2-4 [74.3 kB] Fetched 74.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphx8dbi8d/dbus_1.16.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.1.1-1+b1 [68.8 kB] Fetched 68.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpkus6gglm/libice6_1.1.1-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 diffutils i386 1:3.12-1 [413 kB] Fetched 413 kB in 0s (0 B/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_i386.deb' to '/srv/rebuilderd/tmp/tmppmwbqjjw/diffutils_3.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgssrpc4t64 i386 1.22.1-2 [63.8 kB] Fetched 63.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpisikemgr/libgssrpc4t64_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-7+b1 [150 kB] Fetched 150 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp890whxvz/libblas3_3.12.1-7+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 uuid-dev i386 2.41.3-4 [51.0 kB] Fetched 51.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwslemrsm/uuid-dev_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsombok3 i386 2.4.0-2+b3 [34.0 kB] Fetched 34.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpin2enk0l/libsombok3_2.4.0-2+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnettle8t64 i386 3.10.2-1 [318 kB] Fetched 318 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefcxtt8j/libnettle8t64_3.10.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsysprof-capture-4-dev i386 50~beta-1 [54.3 kB] Fetched 54.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0muukp3j/libsysprof-capture-4-dev_50~beta-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.2-2+b1 [38.6 kB] Fetched 38.6 kB in 0s (0 B/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp6tga94o_/libsensors5_3.6.2-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm93gcv8u/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Fetched 62.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt4rbjfj4/t1utils_1.41-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-harfbuzz-0.0 i386 12.3.2-2+b2 [41.1 kB] Fetched 41.1 kB in 0s (4107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqiow98ns/gir1.2-harfbuzz-0.0_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (0 B/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpa7kzv089/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libncurses-dev i386 6.6+20251231-1 [384 kB] Fetched 384 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mjcar77/libncurses-dev_6.6+20251231-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgfortran-15-dev i386 15.2.0-15 [779 kB] Fetched 779 kB in 0s (70.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpniz98qzz/libgfortran-15-dev_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.22.1-2 [35.3 kB] Fetched 35.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp16trvuku/libkrb5support0_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.13-1 [250 kB] Fetched 250 kB in 0s (0 B/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.13-1_i386.deb' to '/srv/rebuilderd/tmp/tmpj1kcnqig/libx11-xcb1_1.8.13-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-shm0-dev i386 1.17.0-2+b2 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3s_ba8d_/libxcb-shm0-dev_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxml2-16 i386 2.15.1+dfsg-2+b1 [670 kB] Fetched 670 kB in 0s (61.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprshseopk/libxml2-16_2.15.1+dfsg-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcairo-gobject2 i386 1.18.4-3 [129 kB] Fetched 129 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe7fuh3br/libcairo-gobject2_1.18.4-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.4-1 [118 kB] Fetched 118 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2aw6ghhu/libexpat1_2.7.4-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libhogweed6t64 i386 3.10.2-1 [339 kB] Fetched 339 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpijbn2vrk/libhogweed6t64_3.10.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-5 [27.2 kB] Fetched 27.2 kB in 0s (2708 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwv6fdf5r/libfribidi0_1.0.16-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libquadmath0 i386 16-20260308-1 [231 kB] Fetched 231 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wm9qahh/libquadmath0_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2025.20260124-1 [29.9 MB] Fetched 29.9 MB in 0s (77.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbe6jtcs6/texlive-plain-generic_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.21.2-3 [678 kB] Fetched 678 kB in 0s (64.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukxkqvhc/libheif1_1.21.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libidn2-0 i386 2.3.8-4+b1 [112 kB] Fetched 112 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ouhafyp/libidn2-0_2.3.8-4+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2025.1-1 [605 kB] Fetched 605 kB in 0s (56.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoxg_dalp/x11proto-dev_2025.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-3 [598 kB] Fetched 598 kB in 0s (55.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm609qzlv/libcairo2_1.18.4-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.57.0-1 [61.5 kB] Fetched 61.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprx9yo1pz/libpangoft2-1.0-0_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2025.20260124-1 [8520 kB] Fetched 8520 kB in 0s (164 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnx4swvf3/texlive-latex-recommended_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libc-bin i386 2.42-13 [667 kB] Fetched 667 kB in 0s (60.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg_i7twks/libc-bin_2.42-13_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdebconfclient0 i386 0.282+b2 [11.2 kB] Fetched 11.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbaaaqpi3/libdebconfclient0_0.282+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtasn1-6-dev i386 4.21.0-2 [103 kB] Fetched 103 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeoshjxqn/libtasn1-6-dev_4.21.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-3 [917 kB] Fetched 917 kB in 0s (78.8 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-3_i386.deb' to '/srv/rebuilderd/tmp/tmptjpqy0sv/zlib1g-dev_1.3.dfsg+really1.3.1-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.1-1 [1478 kB] Fetched 1478 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptkktyxny/man-db_2.13.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libssh2-1-dev i386 1.11.1-1+b1 [407 kB] Fetched 407 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2mbw5wc/libssh2-1-dev_1.11.1-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libzstd-dev i386 1.5.7+dfsg-3+b1 [376 kB] Fetched 376 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp844a440o/libzstd-dev_1.5.7+dfsg-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.131-1 [9168 B] Fetched 9168 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2jxs45i4/libdrm-common_2.4.131-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-ossl-dev i386 1.21.0-1 [28.1 kB] Fetched 28.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmibofyb/libngtcp2-crypto-ossl-dev_1.21.0-1_i386.deb' Downloading dependency 1 of 531: tcl8.6-dev:i386=8.6.17+dfsg-1+b1 Downloading dependency 2 of 531: libthai0:i386=0.1.30-1 Downloading dependency 3 of 531: libidn2-dev:i386=2.3.8-4+b1 Downloading dependency 4 of 531: netbase:i386=6.5 Downloading dependency 5 of 531: util-linux:i386=2.41.3-4 Downloading dependency 6 of 531: libsharpyuv0:i386=1.5.0-0.1+b1 Downloading dependency 7 of 531: libarchive-zip-perl:i386=1.68-1 Downloading dependency 8 of 531: libcairo2-dev:i386=1.18.4-3 Downloading dependency 9 of 531: libnghttp2-14:i386=1.68.0-2 Downloading dependency 10 of 531: libctf-nobfd0:i386=2.46-3 Downloading dependency 11 of 531: libxrender1:i386=1:0.9.12-1+b1 Downloading dependency 12 of 531: libp11-kit-dev:i386=0.26.2-2 Downloading dependency 13 of 531: libctf0:i386=2.46-3 Downloading dependency 14 of 531: libkrb5-3:i386=1.22.1-2 Downloading dependency 15 of 531: libedit2:i386=3.1-20251016-1 Downloading dependency 16 of 531: libharfbuzz-icu0:i386=12.3.2-2+b2 Downloading dependency 17 of 531: libsepol-dev:i386=3.9-2 Downloading dependency 18 of 531: libxcomposite1:i386=1:0.4.6-1+b1 Downloading dependency 19 of 531: libtirpc3t64:i386=1.3.6+ds-1 Downloading dependency 20 of 531: libgdbm6t64:i386=1.26-1+b1 Downloading dependency 21 of 531: po-debconf:i386=1.0.22 Downloading dependency 22 of 531: libtinfo6:i386=6.6+20251231-1 Downloading dependency 23 of 531: xz-utils:i386=5.8.2-2 Downloading dependency 24 of 531: libk5crypto3:i386=1.22.1-2 Downloading dependency 25 of 531: libglib2.0-dev-bin:i386=2.87.2-3 Downloading dependency 26 of 531: hicolor-icon-theme:i386=0.18-2 Downloading dependency 27 of 531: libmagic-mgc:i386=1:5.46-5+b1 Downloading dependency 28 of 531: libwebp7:i386=1.5.0-0.1+b1 Downloading dependency 29 of 531: libpcre2-16-0:i386=10.46-1+b1 Downloading dependency 30 of 531: libavahi-client3:i386=0.8-18 Downloading dependency 31 of 531: groff-base:i386=1.23.0-10 Downloading dependency 32 of 531: libjpeg-dev:i386=1:2.1.5-4 Downloading dependency 33 of 531: libffi-dev:i386=3.5.2-3+b1 Downloading dependency 34 of 531: libxkbcommon0:i386=1.13.1-1 Downloading dependency 35 of 531: libgnutls30t64:i386=3.8.12-3 Downloading dependency 36 of 531: autoconf:i386=2.72-6 Downloading dependency 37 of 531: libdrm2:i386=2.4.131-1 Downloading dependency 38 of 531: libaudit-common:i386=1:4.1.2-1 Downloading dependency 39 of 531: base-passwd:i386=3.6.8 Downloading dependency 40 of 531: libharfbuzz-gobject0:i386=12.3.2-2+b2 Downloading dependency 41 of 531: libepoxy0:i386=1.5.10-2+b1 Downloading dependency 42 of 531: fontconfig-config:i386=2.17.1-5 Downloading dependency 43 of 531: libreadline-dev:i386=8.3-4 Downloading dependency 44 of 531: libtirpc-common:i386=1.3.6+ds-1 Downloading dependency 45 of 531: adwaita-icon-theme:i386=50~alpha-1 Downloading dependency 46 of 531: mount:i386=2.41.3-4 Downloading dependency 47 of 531: libxrender-dev:i386=1:0.9.12-1+b1 Downloading dependency 48 of 531: libteckit0:i386=2.5.13+ds-1 Downloading dependency 49 of 531: libcommons-parent-java:i386=56-1 Downloading dependency 50 of 531: libxcb-dri3-0:i386=1.17.0-2+b2 Downloading dependency 51 of 531: libuuid1:i386=2.41.3-4 Downloading dependency 52 of 531: gir1.2-glib-2.0-dev:i386=2.87.2-3 Downloading dependency 53 of 531: libpcsclite1:i386=2.4.1-1 Downloading dependency 54 of 531: libgcc-15-dev:i386=15.2.0-15 Downloading dependency 55 of 531: libgif7:i386=5.2.2-1+b2 Downloading dependency 56 of 531: libtext-wrapi18n-perl:i386=0.06-10 Downloading dependency 57 of 531: libpcre2-posix3:i386=10.46-1+b1 Downloading dependency 58 of 531: libkadm5srv-mit12:i386=1.22.1-2 Downloading dependency 59 of 531: libheif-plugin-libde265:i386=1.21.2-3 Downloading dependency 60 of 531: libthai-dev:i386=0.1.30-1 Downloading dependency 61 of 531: librsvg2-2:i386=2.61.3+dfsg-3+b1 Downloading dependency 62 of 531: libpangocairo-1.0-0:i386=1.57.0-1 Downloading dependency 63 of 531: libpipeline1:i386=1.5.8-2 Downloading dependency 64 of 531: libelf1t64:i386=0.194-1 Downloading dependency 65 of 531: libnspr4:i386=2:4.38.2-1 Downloading dependency 66 of 531: liblerc-dev:i386=4.0.0+ds-5+b1 Downloading dependency 67 of 531: libblkid-dev:i386=2.41.3-4 Downloading dependency 68 of 531: libc-dev-bin:i386=2.42-13 Downloading dependency 69 of 531: libdrm-intel1:i386=2.4.131-1 Downloading dependency 70 of 531: libsensors-config:i386=1:3.6.2-2 Downloading dependency 71 of 531: python3:i386=3.13.9-3 Downloading dependency 72 of 531: libuchardet0:i386=0.0.8-2+b1 Downloading dependency 73 of 531: gtk-update-icon-cache:i386=4.21.6+ds-1 Downloading dependency 74 of 531: gfortran-i686-linux-gnu:i386=4:15.2.0-5 Downloading dependency 75 of 531: texlive-extra-utils:i386=2025.20260124-1 Downloading dependency 76 of 531: libwayland-client0:i386=1.24.0-2+b2 Downloading dependency 77 of 531: gcc-15-base:i386=15.2.0-15 Downloading dependency 78 of 531: binutils-i686-linux-gnu:i386=2.46-3 Downloading dependency 79 of 531: libperl5.40:i386=5.40.1-7 Downloading dependency 80 of 531: fontconfig:i386=2.17.1-5 Downloading dependency 81 of 531: libz3-4:i386=4.13.3-1+b1 Downloading dependency 82 of 531: default-jdk-headless:i386=2:1.25-77 Downloading dependency 83 of 531: dconf-gsettings-backend:i386=0.49.0-4 Downloading dependency 84 of 531: libyaml-tiny-perl:i386=1.76-1 Downloading dependency 85 of 531: libhwy1t64:i386=1.3.0-2 Downloading dependency 86 of 531: xtrans-dev:i386=1.6.0-1 Downloading dependency 87 of 531: libkadm5clnt-mit12:i386=1.22.1-2 Downloading dependency 88 of 531: pkgconf:i386=2.5.1-4 Downloading dependency 89 of 531: dbus:i386=1.16.2-4 Downloading dependency 90 of 531: libice6:i386=2:1.1.1-1+b1 Downloading dependency 91 of 531: diffutils:i386=1:3.12-1 Downloading dependency 92 of 531: libgssrpc4t64:i386=1.22.1-2 Downloading dependency 93 of 531: libblas3:i386=3.12.1-7+b1 Downloading dependency 94 of 531: uuid-dev:i386=2.41.3-4 Downloading dependency 95 of 531: libsombok3:i386=2.4.0-2+b3 Downloading dependency 96 of 531: libnettle8t64:i386=3.10.2-1 Downloading dependency 97 of 531: libsysprof-capture-4-dev:i386=50~beta-1 Downloading dependency 98 of 531: libsensors5:i386=1:3.6.2-2+b1 Downloading dependency 99 of 531: libxml-sax-base-perl:i386=1.09-3 Downloading dependency 100 of 531: t1utils:i386=1.41-4 Downloading dependency 101 of 531: gir1.2-harfbuzz-0.0:i386=12.3.2-2+b2 Downloading dependency 102 of 531: x11-common:i386=1:7.7+26 Downloading dependency 103 of 531: libncurses-dev:i386=6.6+20251231-1 Downloading dependency 104 of 531: libgfortran-15-dev:i386=15.2.0-15 Downloading dependency 105 of 531: libkrb5support0:i386=1.22.1-2 Downloading dependency 106 of 531: libx11-xcb1:i386=2:1.8.13-1 Downloading dependency 107 of 531: libxcb-shm0-dev:i386=1.17.0-2+b2 Downloading dependency 108 of 531: libxml2-16:i386=2.15.1+dfsg-2+b1 Downloading dependency 109 of 531: libcairo-gobject2:i386=1.18.4-3 Downloading dependency 110 of 531: libexpat1:i386=2.7.4-1 Downloading dependency 111 of 531: libhogweed6t64:i386=3.10.2-1 Downloading dependency 112 of 531: libfribidi0:i386=1.0.16-5 Downloading dependency 113 of 531: libquadmath0:i386=16-20260308-1 Downloading dependency 114 of 531: texlive-plain-generic:i386=2025.20260124-1 Downloading dependency 115 of 531: libheif1:i386=1.21.2-3 Downloading dependency 116 of 531: libidn2-0:i386=2.3.8-4+b1 Downloading dependency 117 of 531: x11proto-dev:i386=2025.1-1 Downloading dependency 118 of 531: libcairo2:i386=1.18.4-3 Downloading dependency 119 of 531: libpangoft2-1.0-0:i386=1.57.0-1 Downloading dependency 120 of 531: texlive-latex-recommended:i386=2025.20260124-1 Downloading dependency 121 of 531: libc-bin:i386=2.42-13 Downloading dependency 122 of 531: libdebconfclient0:i386=0.282+b2 Downloading dependency 123 of 531: libtasn1-6-dev:i386=4.21.0-2 Downloading dependency 124 of 531: zlib1g-dev:i386=1:1.3.dfsg+really1.3.1-3 Downloading dependency 125 of 531: man-db:i386=2.13.1-1 Downloading dependency 126 of 531: libssh2-1-dev:i386=1.11.1-1+b1 Downloading dependency 127 of 531: libzstd-dev:i386=1.5.7+dfsg-3+b1 Downloading dependency 128 of 531: libdrm-common:i386=2.4.131-1 Downloading dependency 129 of 531: libngtcp2-crypto-ossl-dev:i386=1.21.0-1 Downloading dependency 130 of 531: libpam-modules-bin:i386=1.7.0-5+b1Get:1 http://deb.debian.org/debian unstable/main i386 libpam-modules-bin i386 1.7.0-5+b1 [52.2 kB] Fetched 52.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp7ucif0b/libpam-modules-bin_1.7.0-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev i386 2.87.2-3 [58.8 kB] Fetched 58.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn9sf3qs_/libglib2.0-dev_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 2.5.1-4 [36.1 kB] Fetched 36.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphylr7pj5/pkgconf-bin_2.5.1-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 g++-15 i386 15.2.0-15 [26.3 kB] Fetched 26.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuos8i3zx/g++-15_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-9+b1 [67.0 kB] Fetched 67.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpk9f8ipt8/libproc2-0_4.0.4-9+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcre2-dev i386 10.46-1+b1 [853 kB] Fetched 853 kB in 0s (78.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3w3m_3h/libpcre2-dev_10.46-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bash i386 5.3-2 [1594 kB] Fetched 1594 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1ffujyh/bash_5.3-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 g++ i386 4:15.2.0-5 [1344 B] Fetched 1344 B in 0s (0 B/s) dpkg-name: info: moved 'g++_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmpy_u4gtlx/g++_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpts26d2x7/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtcl8.6 i386 8.6.17+dfsg-1+b1 [1112 kB] Fetched 1112 kB in 0s (89.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5q4a9lm_/libtcl8.6_8.6.17+dfsg-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libldap-dev i386 2.6.10+dfsg-1+b1 [333 kB] Fetched 333 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2rx2kquf/libldap-dev_2.6.10+dfsg-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.16-1 [270 kB] Fetched 270 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kmevv0y/libcups2t64_2.4.16-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2025.20260124-1 [32.8 MB] Fetched 32.8 MB in 0s (75.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjavnqypq/texlive-latex-extra_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 binutils i386 2.46-3 [289 kB] Fetched 289 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tqmf784/binutils_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.12-1 [1978 kB] Fetched 1978 kB in 0s (132 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp58d72kp2/libpython3.13-stdlib_3.13.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 2.2.5-0.3+b3 [16.4 kB] Fetched 16.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfq8xnzgp/libpaper-utils_2.2.5-0.3+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 ca-certificates-java all 20240118 [11.6 kB] Fetched 11.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4e55kjll/ca-certificates-java_20240118_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b5 [9692 B] Fetched 9692 B in 0s (900 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp591s9jkx/libtext-charwidth-perl_0.04-11+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.4-1 [19.4 kB] Fetched 19.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpisdf8ga2/libcom-err2_1.47.4-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openjdk-25-jre i386 25.0.3~5ea-1 [198 kB] Fetched 198 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj2ao4blv/openjdk-25-jre_25.0.3~5ea-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3-packaging all 25.0-2 [56.7 kB] Fetched 56.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnvsrlwr2/python3-packaging_25.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1tgrxkhn/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-18 [47.3 kB] Fetched 47.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptddj69_b/libavahi-common3_0.8-18_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev i386 2.87.2-3 [1830 kB] Fetched 1830 kB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_v1s9pk/libgio-2.0-dev_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-2 [20.7 kB] Fetched 20.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2_i386.deb' to '/srv/rebuilderd/tmp/tmpdczx7co8/libxxf86vm1_1.1.4-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 linux-libc-dev all 6.19.6-1 [1942 kB] Fetched 1942 kB in 0s (133 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv6vk6nf7/linux-libc-dev_6.19.6-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openjdk-25-jdk-headless i386 25.0.3~5ea-1 [80.6 MB] Fetched 80.6 MB in 0s (269 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp9jeyzfo/openjdk-25-jdk-headless_25.0.3~5ea-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.11-1+b1 [24.2 kB] Fetched 24.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp78ccqq4_/libxau-dev_1.0.11-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libc6 i386 2.42-13 [1685 kB] Fetched 1685 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplt6zg9l6/libc6_2.42-13_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 coreutils i386 9.10-1 [3183 kB] Fetched 3183 kB in 0s (170 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyx6ibxyq/coreutils_9.10-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglib2.0-data all 2.87.2-3 [1292 kB] Fetched 1292 kB in 0s (90.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7r9yfqa3/libglib2.0-data_2.87.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 16-20260308-1 [752 kB] Fetched 752 kB in 0s (63.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvzg0rti2/libgfortran5_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 glycin-thumbnailers i386 2.0.8-1 [1219 kB] Fetched 1219 kB in 0s (96.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkz4trzeg/glycin-thumbnailers_2.0.8-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmount1 i386 2.41.3-4 [227 kB] Fetched 227 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3xbx7mg/libmount1_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bzip2 i386 1.0.8-6+b1 [41.0 kB] Fetched 41.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_w34tdi/bzip2_1.0.8-6+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 perl i386 5.40.1-7 [267 kB] Fetched 267 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp098iiv10/perl_5.40.1-7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-6+b1 [31.7 kB] Fetched 31.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgj831lz/libbz2-dev_1.0.8-6+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xfonts-base all 1:1.0.5+nmu1 [5895 kB] Fetched 5895 kB in 0s (153 MB/s) dpkg-name: info: moved 'xfonts-base_1%3a1.0.5+nmu1_all.deb' to '/srv/rebuilderd/tmp/tmp3e6p16vd/xfonts-base_1.0.5+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc i386 4:15.2.0-5 [5152 B] Fetched 5152 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmp9pdqx8sf/gcc_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsharpyuv-dev i386 1.5.0-0.1+b1 [120 kB] Fetched 120 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpugljb0ud/libsharpyuv-dev_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxkbfile1 i386 1:1.1.0-1+b5 [80.3 kB] Fetched 80.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libxkbfile1_1%3a1.1.0-1+b5_i386.deb' to '/srv/rebuilderd/tmp/tmpvg14xvmc/libxkbfile1_1.1.0-1+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsm-dev i386 2:1.2.6-1+b1 [41.5 kB] Fetched 41.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp0gbvi0xl/libsm-dev_1.2.6-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpam-systemd i386 260~rc2-1 [312 kB] Fetched 312 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3edt0k_6/libpam-systemd_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libbrotli-dev i386 1.2.0-3 [311 kB] Fetched 311 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_bilh3zl/libbrotli-dev_1.2.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2025.20260124-1 [1340 kB] Fetched 1340 kB in 0s (70.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdwm4pnm6/texlive-latex-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_53gauq/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz-cairo0 i386 12.3.2-2+b2 [29.0 kB] Fetched 29.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwu8n6p_/libharfbuzz-cairo0_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-2 [28.5 kB] Fetched 28.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2_i386.deb' to '/srv/rebuilderd/tmp/tmpqlm38zdz/libxdmcp6_1.1.5-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 build-essential i386 12.12 [4620 B] Fetched 4620 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9o1v4g5a/build-essential_12.12_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfile-homedir-perl all 1.006-2 [42.4 kB] Fetched 42.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4cpbj6p2/libfile-homedir-perl_1.006-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxtst6 i386 2:1.2.5-1+b1 [26.7 kB] Fetched 26.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp93p_rctq/libxtst6_1.2.5-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (52.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyh9ebzod/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-freedesktop-dev i386 1.86.0-6 [52.5 kB] Fetched 52.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj677fbwn/gir1.2-freedesktop-dev_1.86.0-6_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.9-3 [10.6 kB] Fetched 10.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu6lshznn/libpython3-stdlib_3.13.9-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcursor1 i386 1:1.2.3-1+b1 [41.8 kB] Fetched 41.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpqje1j7t5/libxcursor1_1.2.3-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 librtmp-dev i386 2.4+20151223.gitfa8646d.1-3+b1 [72.9 kB] Fetched 72.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_p_7yjjf/librtmp-dev_2.4+20151223.gitfa8646d.1-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus-user-session i386 1.16.2-4 [53.0 kB] Fetched 53.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoh13u1av/dbus-user-session_1.16.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libblkid1 i386 2.41.3-4 [190 kB] Fetched 190 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprovqd2t2/libblkid1_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpaper2 i386 2.2.5-0.3+b3 [17.1 kB] Fetched 17.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp874i9txl/libpaper2_2.2.5-0.3+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus-daemon i386 1.16.2-4 [170 kB] Fetched 170 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprw0zxcur/dbus-daemon_1.16.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgklxdqjp/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcolord2 i386 1.4.8-3 [147 kB] Fetched 147 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6th0vfrv/libcolord2_1.4.8-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-6+b1 [10.3 kB] Fetched 10.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_pcmaz2/libkeyutils1_1.6.3-6+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.2-2 [81.2 kB] Fetched 81.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-2_i386.deb' to '/srv/rebuilderd/tmp/tmplnd0kdag/libxi6_1.8.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 default-jdk i386 2:1.25-77 [1040 B] Fetched 1040 B in 0s (0 B/s) dpkg-name: info: moved 'default-jdk_2%3a1.25-77_i386.deb' to '/srv/rebuilderd/tmp/tmp41pm5txt/default-jdk_1.25-77_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglycin-2-0 i386 2.0.8-1 [1567 kB] Fetched 1567 kB in 0s (107 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_hpkzdbe/libglycin-2-0_2.0.8-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b5 [20.6 kB] Fetched 20.6 kB in 0s (0 B/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b5_i386.deb' to '/srv/rebuilderd/tmp/tmptyyafnlw/libxfixes3_6.0.0-2+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 mawk i386 1.3.4.20260302-1 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfn2b1vw4/mawk_1.3.4.20260302-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 at-spi2-common all 2.59.1-2 [174 kB] Fetched 174 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9o1fq39w/at-spi2-common_2.59.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1pi4p9sn/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.1-7+b1 [4395 kB] Fetched 4395 kB in 0s (194 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6rpn49qk/liblapack-dev_3.12.1-7+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xserver-common all 2:21.1.21-1 [2435 kB] Fetched 2435 kB in 0s (147 MB/s) dpkg-name: info: moved 'xserver-common_2%3a21.1.21-1_all.deb' to '/srv/rebuilderd/tmp/tmp5xff9652/xserver-common_21.1.21-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.13-1 [346 kB] Fetched 346 kB in 0s (31.1 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.13-1_all.deb' to '/srv/rebuilderd/tmp/tmpve9c2ww3/libx11-data_1.8.13-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc-15 i386 15.2.0-15 [537 kB] Fetched 537 kB in 0s (50.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpne70fvf7/gcc-15_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-3 [46.4 kB] Fetched 46.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpanme4334/libglvnd0_1.7.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dash i386 0.5.12-12 [103 kB] Fetched 103 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmczskz61/dash_0.5.12-12_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-9+b1 [880 kB] Fetched 880 kB in 0s (76.2 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpnbokf13i/procps_4.0.4-9+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libstdc++-15-dev i386 15.2.0-15 [2818 kB] Fetched 2818 kB in 0s (156 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprnt9m42z/libstdc++-15-dev_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dpkg i386 1.23.7 [1557 kB] Fetched 1557 kB in 0s (113 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu6mad75k/dpkg_1.23.7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.14-1 [41.3 kB] Fetched 41.3 kB in 0s (4007 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm1xx3ib_/libdatrie1_0.2.14-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwebpdecoder3 i386 1.5.0-0.1+b1 [214 kB] Fetched 214 kB in 0s (20.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzitszmv_/libwebpdecoder3_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openssl-provider-legacy i386 3.5.5-1 [307 kB] Fetched 307 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprldh8an5/openssl-provider-legacy_3.5.5-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxmuu1 i386 2:1.1.3-4 [21.8 kB] Fetched 21.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-4_i386.deb' to '/srv/rebuilderd/tmp/tmpkfr1ord5/libxmuu1_1.1.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gfortran i386 4:15.2.0-5 [1432 B] Fetched 1432 B in 0s (0 B/s) dpkg-name: info: moved 'gfortran_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmpvr0ogtv5/gfortran_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 rpcsvc-proto i386 1.4.3-1 [66.1 kB] Fetched 66.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi96psu5a/rpcsvc-proto_1.4.3-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxss-dev i386 1:1.2.3-1+b4 [23.0 kB] Fetched 23.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxss-dev_1%3a1.2.3-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmp31mvwtbz/libxss-dev_1.2.3-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 26.0.1-2 [122 kB] Fetched 122 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6yt5sr0/libglx-mesa0_26.0.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libevent-2.1-7t64 i386 2.1.12-stable-10+b2 [196 kB] Fetched 196 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpksg8s_2l/libevent-2.1-7t64_2.1.12-stable-10+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1jwxknz_/xdg-utils_1.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1+b2 [60.3 kB] Fetched 60.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp908h6x28/libpsl5t64_0.21.2-1.1+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libaudit1 i386 1:4.1.2-1+b1 [58.5 kB] Fetched 58.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpxqivby1e/libaudit1_4.1.2-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b4 [52.7 kB] Fetched 52.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmp8sllfowz/libxext6_1.3.4-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsepol2 i386 3.9-2 [319 kB] Fetched 319 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp327fi95h/libsepol2_3.9-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b3 [32.2 kB] Fetched 32.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0aa_vrhq/libjbig0_2.1-6.1+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gfortran-15-i686-linux-gnu i386 15.2.0-15 [13.5 MB] Fetched 13.5 MB in 0s (255 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx0q2curt/gfortran-15-i686-linux-gnu_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-10 [61.4 kB] Fetched 61.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp4utfndl/libsasl2-2_2.1.28+dfsg1-10_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.4.341.0-1 [152 kB] Fetched 152 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptg5a0b47/libvulkan1_1.4.341.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.6-1+b1 [38.4 kB] Fetched 38.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpr__7fye1/libsm6_1.2.6-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.1-1 [372 kB] Fetched 372 kB in 0s (34.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6oss81z/libtiff6_4.7.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.12-1 [866 kB] Fetched 866 kB in 0s (73.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo7eo7bur/libpython3.13-minimal_3.13.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 default-jre-headless i386 2:1.25-77 [3012 B] Fetched 3012 B in 0s (298 kB/s) dpkg-name: info: moved 'default-jre-headless_2%3a1.25-77_i386.deb' to '/srv/rebuilderd/tmp/tmpubil_3nd/default-jre-headless_1.25-77_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libssl3t64 i386 3.5.5-1 [2422 kB] Fetched 2422 kB in 0s (141 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjpxffk7y/libssl3t64_3.5.5-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libatk-bridge2.0-0t64 i386 2.59.1-2 [74.6 kB] Fetched 74.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeox4b107/libatk-bridge2.0-0t64_2.59.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxml-libxml-perl i386 2.0207+dfsg+really+2.0134-7 [324 kB] Fetched 324 kB in 0s (32.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppd5517k6/libxml-libxml-perl_2.0207+dfsg+really+2.0134-7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxt-dev i386 1:1.2.1-1.3+b1 [420 kB] Fetched 420 kB in 0s (40.0 MB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.3+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpp1s02mz1/libxt-dev_1.2.1-1.3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmpfi0 i386 1.5.4+ds-4+b1 [39.6 kB] Fetched 39.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ffsthrs/libmpfi0_1.5.4+ds-4+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtirpc-dev i386 1.3.6+ds-1 [201 kB] Fetched 201 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1iopyho/libtirpc-dev_1.3.6+ds-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-fonts-extra all 2025.20260124-1 [669 MB] Fetched 669 MB in 13s (50.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgdctico/texlive-fonts-extra_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 x11-xkb-utils i386 7.7+9 [163 kB] Fetched 163 kB in 0s (14.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa00zsids/x11-xkb-utils_7.7+9_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-5+b1 [660 kB] Fetched 660 kB in 0s (59.5 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpgmq42w9h/libgmp-dev_6.3.0+dfsg-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 default-jre i386 2:1.25-77 [1028 B] Fetched 1028 B in 0s (0 B/s) dpkg-name: info: moved 'default-jre_2%3a1.25-77_i386.deb' to '/srv/rebuilderd/tmp/tmpolwuqkit/default-jre_1.25-77_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjansson4 i386 2.14-2+b4 [41.9 kB] Fetched 41.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pnry6_e/libjansson4_2.14-2+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblzma-dev i386 5.8.2-2 [380 kB] Fetched 380 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpagm_n_t7/liblzma-dev_5.8.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 glycin-loaders i386 2.0.8-1 [3197 kB] Fetched 3197 kB in 0s (174 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1yq8iufw/glycin-loaders_2.0.8-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 java-common all 0.77 [6620 B] Fetched 6620 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ls_wa3g/java-common_0.77_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tar i386 1.35+dfsg-4 [840 kB] Fetched 840 kB in 0s (79.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp55rzsh3d/tar_1.35+dfsg-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.1-7+b1 [162 kB] Fetched 162 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wplulu4/libblas-dev_3.12.1-7+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdpkg-perl all 1.23.7 [669 kB] Fetched 669 kB in 0s (64.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4mfko40f/libdpkg-perl_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libisl23 i386 0.27-1+b1 [751 kB] Fetched 751 kB in 0s (67.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfm7igxyr/libisl23_0.27-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libseccomp2 i386 2.6.0-2+b1 [55.0 kB] Fetched 55.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb8n7b0aj/libseccomp2_2.6.0-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1+b1 [114 kB] Fetched 114 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfjxe98c4/libwebpdemux2_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgtk-3-common all 3.24.51-4 [4923 kB] Fetched 4923 kB in 0s (204 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesvgpqgk/libgtk-3-common_3.24.51-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8fi2qm2x/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz1g58o7_/libfile-which-perl_1.27-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libatspi2.0-0t64 i386 2.59.1-2 [86.0 kB] Fetched 86.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpal2k8jg2/libatspi2.0-0t64_2.59.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpam0g i386 1.7.0-5+b1 [73.3 kB] Fetched 73.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt95jwrq8/libpam0g_1.7.0-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-pango-1.0 i386 1.57.0-1 [39.4 kB] Fetched 39.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbrzx2h5/gir1.2-pango-1.0_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.55-1 [291 kB] Fetched 291 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8dfca98c/libpng16-16t64_1.6.55-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-6+b1 [38.0 kB] Fetched 38.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezsx2gxr/libbz2-1.0_1.0.8-6+b1_i386.deb' Downloading dependency 131 of 531: libglib2.0-dev:i386=2.87.2-3 Downloading dependency 132 of 531: pkgconf-bin:i386=2.5.1-4 Downloading dependency 133 of 531: g++-15:i386=15.2.0-15 Downloading dependency 134 of 531: libproc2-0:i386=2:4.0.4-9+b1 Downloading dependency 135 of 531: libpcre2-dev:i386=10.46-1+b1 Downloading dependency 136 of 531: bash:i386=5.3-2 Downloading dependency 137 of 531: g++:i386=4:15.2.0-5 Downloading dependency 138 of 531: ncurses-base:i386=6.6+20251231-1 Downloading dependency 139 of 531: libtcl8.6:i386=8.6.17+dfsg-1+b1 Downloading dependency 140 of 531: libldap-dev:i386=2.6.10+dfsg-1+b1 Downloading dependency 141 of 531: libcups2t64:i386=2.4.16-1 Downloading dependency 142 of 531: texlive-latex-extra:i386=2025.20260124-1 Downloading dependency 143 of 531: binutils:i386=2.46-3 Downloading dependency 144 of 531: libpython3.13-stdlib:i386=3.13.12-1 Downloading dependency 145 of 531: libpaper-utils:i386=2.2.5-0.3+b3 Downloading dependency 146 of 531: ca-certificates-java:i386=20240118 Downloading dependency 147 of 531: libtext-charwidth-perl:i386=0.04-11+b5 Downloading dependency 148 of 531: libcom-err2:i386=1.47.4-1 Downloading dependency 149 of 531: openjdk-25-jre:i386=25.0.3~5ea-1 Downloading dependency 150 of 531: python3-packaging:i386=25.0-2 Downloading dependency 151 of 531: sensible-utils:i386=0.0.26 Downloading dependency 152 of 531: libavahi-common3:i386=0.8-18 Downloading dependency 153 of 531: libgio-2.0-dev:i386=2.87.2-3 Downloading dependency 154 of 531: libxxf86vm1:i386=1:1.1.4-2 Downloading dependency 155 of 531: linux-libc-dev:i386=6.19.6-1 Downloading dependency 156 of 531: openjdk-25-jdk-headless:i386=25.0.3~5ea-1 Downloading dependency 157 of 531: libxau-dev:i386=1:1.0.11-1+b1 Downloading dependency 158 of 531: libc6:i386=2.42-13 Downloading dependency 159 of 531: coreutils:i386=9.10-1 Downloading dependency 160 of 531: libglib2.0-data:i386=2.87.2-3 Downloading dependency 161 of 531: libgfortran5:i386=16-20260308-1 Downloading dependency 162 of 531: glycin-thumbnailers:i386=2.0.8-1 Downloading dependency 163 of 531: libmount1:i386=2.41.3-4 Downloading dependency 164 of 531: bzip2:i386=1.0.8-6+b1 Downloading dependency 165 of 531: perl:i386=5.40.1-7 Downloading dependency 166 of 531: libbz2-dev:i386=1.0.8-6+b1 Downloading dependency 167 of 531: xfonts-base:i386=1:1.0.5+nmu1 Downloading dependency 168 of 531: gcc:i386=4:15.2.0-5 Downloading dependency 169 of 531: libsharpyuv-dev:i386=1.5.0-0.1+b1 Downloading dependency 170 of 531: libxkbfile1:i386=1:1.1.0-1+b5 Downloading dependency 171 of 531: libsm-dev:i386=2:1.2.6-1+b1 Downloading dependency 172 of 531: libpam-systemd:i386=260~rc2-1 Downloading dependency 173 of 531: libbrotli-dev:i386=1.2.0-3 Downloading dependency 174 of 531: texlive-latex-base:i386=2025.20260124-1 Downloading dependency 175 of 531: fonts-dejavu-mono:i386=2.37-8 Downloading dependency 176 of 531: libharfbuzz-cairo0:i386=12.3.2-2+b2 Downloading dependency 177 of 531: libxdmcp6:i386=1:1.1.5-2 Downloading dependency 178 of 531: build-essential:i386=12.12 Downloading dependency 179 of 531: libfile-homedir-perl:i386=1.006-2 Downloading dependency 180 of 531: libxtst6:i386=2:1.2.5-1+b1 Downloading dependency 181 of 531: libtool:i386=2.5.4-9 Downloading dependency 182 of 531: gir1.2-freedesktop-dev:i386=1.86.0-6 Downloading dependency 183 of 531: libpython3-stdlib:i386=3.13.9-3 Downloading dependency 184 of 531: libxcursor1:i386=1:1.2.3-1+b1 Downloading dependency 185 of 531: librtmp-dev:i386=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 186 of 531: dbus-user-session:i386=1.16.2-4 Downloading dependency 187 of 531: libblkid1:i386=2.41.3-4 Downloading dependency 188 of 531: libpaper2:i386=2.2.5-0.3+b3 Downloading dependency 189 of 531: dbus-daemon:i386=1.16.2-4 Downloading dependency 190 of 531: media-types:i386=14.0.0 Downloading dependency 191 of 531: libcolord2:i386=1.4.8-3 Downloading dependency 192 of 531: libkeyutils1:i386=1.6.3-6+b1 Downloading dependency 193 of 531: libxi6:i386=2:1.8.2-2 Downloading dependency 194 of 531: default-jdk:i386=2:1.25-77 Downloading dependency 195 of 531: libglycin-2-0:i386=2.0.8-1 Downloading dependency 196 of 531: libxfixes3:i386=1:6.0.0-2+b5 Downloading dependency 197 of 531: mawk:i386=1.3.4.20260302-1 Downloading dependency 198 of 531: at-spi2-common:i386=2.59.1-2 Downloading dependency 199 of 531: libxml-sax-perl:i386=1.02+dfsg-4 Downloading dependency 200 of 531: liblapack-dev:i386=3.12.1-7+b1 Downloading dependency 201 of 531: xserver-common:i386=2:21.1.21-1 Downloading dependency 202 of 531: libx11-data:i386=2:1.8.13-1 Downloading dependency 203 of 531: gcc-15:i386=15.2.0-15 Downloading dependency 204 of 531: libglvnd0:i386=1.7.0-3 Downloading dependency 205 of 531: dash:i386=0.5.12-12 Downloading dependency 206 of 531: procps:i386=2:4.0.4-9+b1 Downloading dependency 207 of 531: libstdc++-15-dev:i386=15.2.0-15 Downloading dependency 208 of 531: dpkg:i386=1.23.7 Downloading dependency 209 of 531: libdatrie1:i386=0.2.14-1 Downloading dependency 210 of 531: libwebpdecoder3:i386=1.5.0-0.1+b1 Downloading dependency 211 of 531: openssl-provider-legacy:i386=3.5.5-1 Downloading dependency 212 of 531: libxmuu1:i386=2:1.1.3-4 Downloading dependency 213 of 531: gfortran:i386=4:15.2.0-5 Downloading dependency 214 of 531: rpcsvc-proto:i386=1.4.3-1 Downloading dependency 215 of 531: libxss-dev:i386=1:1.2.3-1+b4 Downloading dependency 216 of 531: libglx-mesa0:i386=26.0.1-2 Downloading dependency 217 of 531: libevent-2.1-7t64:i386=2.1.12-stable-10+b2 Downloading dependency 218 of 531: xdg-utils:i386=1.2.1-2 Downloading dependency 219 of 531: libpsl5t64:i386=0.21.2-1.1+b2 Downloading dependency 220 of 531: libaudit1:i386=1:4.1.2-1+b1 Downloading dependency 221 of 531: libxext6:i386=2:1.3.4-1+b4 Downloading dependency 222 of 531: libsepol2:i386=3.9-2 Downloading dependency 223 of 531: libjbig0:i386=2.1-6.1+b3 Downloading dependency 224 of 531: gfortran-15-i686-linux-gnu:i386=15.2.0-15 Downloading dependency 225 of 531: libsasl2-2:i386=2.1.28+dfsg1-10 Downloading dependency 226 of 531: libvulkan1:i386=1.4.341.0-1 Downloading dependency 227 of 531: libsm6:i386=2:1.2.6-1+b1 Downloading dependency 228 of 531: libtiff6:i386=4.7.1-1 Downloading dependency 229 of 531: libpython3.13-minimal:i386=3.13.12-1 Downloading dependency 230 of 531: default-jre-headless:i386=2:1.25-77 Downloading dependency 231 of 531: libssl3t64:i386=3.5.5-1 Downloading dependency 232 of 531: libatk-bridge2.0-0t64:i386=2.59.1-2 Downloading dependency 233 of 531: libxml-libxml-perl:i386=2.0207+dfsg+really+2.0134-7 Downloading dependency 234 of 531: libxt-dev:i386=1:1.2.1-1.3+b1 Downloading dependency 235 of 531: libmpfi0:i386=1.5.4+ds-4+b1 Downloading dependency 236 of 531: libtirpc-dev:i386=1.3.6+ds-1 Downloading dependency 237 of 531: texlive-fonts-extra:i386=2025.20260124-1 Downloading dependency 238 of 531: x11-xkb-utils:i386=7.7+9 Downloading dependency 239 of 531: libgmp-dev:i386=2:6.3.0+dfsg-5+b1 Downloading dependency 240 of 531: default-jre:i386=2:1.25-77 Downloading dependency 241 of 531: libjansson4:i386=2.14-2+b4 Downloading dependency 242 of 531: liblzma-dev:i386=5.8.2-2 Downloading dependency 243 of 531: glycin-loaders:i386=2.0.8-1 Downloading dependency 244 of 531: java-common:i386=0.77 Downloading dependency 245 of 531: tar:i386=1.35+dfsg-4 Downloading dependency 246 of 531: libblas-dev:i386=3.12.1-7+b1 Downloading dependency 247 of 531: libdpkg-perl:i386=1.23.7 Downloading dependency 248 of 531: libisl23:i386=0.27-1+b1 Downloading dependency 249 of 531: libseccomp2:i386=2.6.0-2+b1 Downloading dependency 250 of 531: libwebpdemux2:i386=1.5.0-0.1+b1 Downloading dependency 251 of 531: libgtk-3-common:i386=3.24.51-4 Downloading dependency 252 of 531: libtext-unidecode-perl:i386=1.30-3 Downloading dependency 253 of 531: libfile-which-perl:i386=1.27-2 Downloading dependency 254 of 531: libatspi2.0-0t64:i386=2.59.1-2 Downloading dependency 255 of 531: libpam0g:i386=1.7.0-5+b1 Downloading dependency 256 of 531: gir1.2-pango-1.0:i386=1.57.0-1 Downloading dependency 257 of 531: libpng16-16t64:i386=1.6.55-1 Downloading dependency 258 of 531: libbz2-1.0:i386=1.0.8-6+b1 Downloading dependency 259 of 531: libbrotli1:i386=1.2.0-3Get:1 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.2.0-3 [307 kB] Fetched 307 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphid6jzo1/libbrotli1_1.2.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.16-1+b1 [199 kB] Fetched 199 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4_ezw5yr/libde265-0_1.0.16-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-11+b1 [78.8 kB] Fetched 78.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ns4yn3c/libgraphite2-3_1.3.14-11+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfribidi-dev i386 1.0.16-5 [67.6 kB] Fetched 67.6 kB in 0s (6718 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplxq7ogtv/libfribidi-dev_1.0.16-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpam-modules i386 1.7.0-5+b1 [193 kB] Fetched 193 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph8r1mx8d/libpam-modules_1.7.0-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (76.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2hpmwc38/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Fetched 211 kB in 0s (19.2 MB/s) dpkg-name: info: moved 'libfontbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpdme15yno/libfontbox-java_1.8.16-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xvfb i386 2:21.1.21-1 [3279 kB] Fetched 3279 kB in 0s (141 MB/s) dpkg-name: info: moved 'xvfb_2%3a21.1.21-1_i386.deb' to '/srv/rebuilderd/tmp/tmpgck3zvre/xvfb_21.1.21-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-2 [68.6 kB] Fetched 68.6 kB in 0s (5992 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmjdj_hl1/libcommons-logging-java_1.3.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxft-dev i386 2.3.6-1+b5 [74.7 kB] Fetched 74.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpps3qv5ls/libxft-dev_2.3.6-1+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 22 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08c_iizy/dh-autoreconf_22_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgomp1 i386 16-20260308-1 [153 kB] Fetched 153 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3dwkwkr/libgomp1_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdb5.3t64 i386 5.3.28+dfsg2-11 [768 kB] Fetched 768 kB in 0s (68.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeqnmqtai/libdb5.3t64_5.3.28+dfsg2-11_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.16-1+b1 [222 kB] Fetched 222 kB in 0s (0 B/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpjuq6ne44/libxaw7_1.0.16-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-2+b2 [118 kB] Fetched 118 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprgyvmp7t/libxcb-randr0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xauth i386 1:1.1.2-1.1 [36.5 kB] Fetched 36.5 kB in 0s (0 B/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_i386.deb' to '/srv/rebuilderd/tmp/tmp_5wx37a1/xauth_1.1.2-1.1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgnutls-dane0t64 i386 3.8.12-3 [472 kB] Fetched 472 kB in 0s (45.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw56z4x0o/libgnutls-dane0t64_3.8.12-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libc6-dev i386 2.42-13 [1839 kB] Fetched 1839 kB in 0s (111 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi53t66rm/libc6-dev_2.42-13_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libzstd1 i386 1.5.7+dfsg-3+b1 [308 kB] Fetched 308 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzx1k467a/libzstd1_1.5.7+dfsg-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libicu78 i386 78.2-2 [10.2 MB] Fetched 10.2 MB in 0s (238 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9l26r0cl/libicu78_78.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpkgconf7 i386 2.5.1-4 [49.8 kB] Fetched 49.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjjugih8l/libpkgconf7_2.5.1-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texinfo all 7.2-5 [1973 kB] Fetched 1973 kB in 0s (96.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyd821kxq/texinfo_7.2-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-2+b1 [48.3 kB] Fetched 48.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq3d4aul_/libdeflate0_1.23-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcap2 i386 1:2.75-10+b9 [27.9 kB] Fetched 27.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b9_i386.deb' to '/srv/rebuilderd/tmp/tmptv6r_tkt/libcap2_2.75-10+b9_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.21.2-3 [21.5 kB] Fetched 21.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9k1e6bjy/libheif-plugin-dav1d_1.21.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gfortran-15 i386 15.2.0-15 [18.5 kB] Fetched 18.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph488do8n/gfortran-15_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-3 [82.1 kB] Fetched 82.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk06auj8r/libgl1_1.7.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgtk-3-0t64 i386 3.24.51-4 [3086 kB] Fetched 3086 kB in 0s (168 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqorbn_d7/libgtk-3-0t64_3.24.51-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsystemd0 i386 260~rc2-1 [477 kB] Fetched 477 kB in 0s (47.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp18jyrzsw/libsystemd0_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpixman-1-dev i386 0.46.4-1+b1 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_hk3uw3o/libpixman-1-dev_0.46.4-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2025.20250727.75242+ds-5+b2 [8501 kB] Fetched 8501 kB in 0s (161 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf0w0jang/texlive-binaries_2025.20250727.75242+ds-5+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdconf1 i386 0.49.0-4 [45.8 kB] Fetched 45.8 kB in 0s (4352 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj4v2zv3v/libdconf1_0.49.0-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 nettle-dev i386 3.10.2-1 [1338 kB] Fetched 1338 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ehi5l8r/nettle-dev_3.10.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjoog71gd/libxcb-shm0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxdamage1 i386 1:1.1.7-1 [16.1 kB] Fetched 16.1 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.7-1_i386.deb' to '/srv/rebuilderd/tmp/tmpxx9hse6k/libxdamage1_1.1.7-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 binutils-common i386 2.46-3 [2632 kB] Fetched 2632 kB in 0s (155 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe11esjid/binutils-common_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 sed i386 4.9-2 [333 kB] Fetched 333 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfcl4m5ie/sed_4.9-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmd0 i386 1.1.0-2+b2 [38.4 kB] Fetched 38.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpikrlezf4/libmd0_1.1.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 native-architecture all 0.2.6 [2264 B] Fetched 2264 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltmiuvvi/native-architecture_0.2.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpangoxft-1.0-0 i386 1.57.0-1 [28.5 kB] Fetched 28.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk4motpg7/libpangoxft-1.0-0_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblzma5 i386 5.8.2-2 [338 kB] Fetched 338 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi75_mvh5/liblzma5_5.8.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 girepository-tools i386 2.87.2-3 [162 kB] Fetched 162 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp13f0hmkr/girepository-tools_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-2+b2 [106 kB] Fetched 106 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_x_8g8gp/libxcb-present0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-5+b1 [330 kB] Fetched 330 kB in 0s (0 B/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpdo5dp_ao/libgmpxx4ldbl_6.3.0+dfsg-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Fetched 5527 kB in 0s (140 MB/s) dpkg-name: info: moved 'libpdfbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpketp_i_s/libpdfbox-java_1.8.16-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-3 [39.5 kB] Fetched 39.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_i8mnoy/libglx0_1.7.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 patch i386 2.8-2 [142 kB] Fetched 142 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hxnjvi5/patch_2.8-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libbinutils i386 2.46-3 [597 kB] Fetched 597 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzu65eifs/libbinutils_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dwz i386 0.16-2 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7h3dko41/dwz_0.16-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxfont2 i386 1:2.0.6-2 [136 kB] Fetched 136 kB in 0s (0 B/s) dpkg-name: info: moved 'libxfont2_1%3a2.0.6-2_i386.deb' to '/srv/rebuilderd/tmp/tmpfiej2azu/libxfont2_2.0.6-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmpc3 i386 1.3.1-2+b1 [60.0 kB] Fetched 60.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyl_v1z_n/libmpc3_1.3.1-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 krb5-multidev i386 1.22.1-2 [127 kB] Fetched 127 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3lvrirr/krb5-multidev_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2025.20250727.75242+ds-5+b2 [64.8 kB] Fetched 64.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwz4wazu0/libsynctex2_2025.20250727.75242+ds-5+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 debianutils i386 5.23.2 [92.7 kB] Fetched 92.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fz8xsb7/debianutils_5.23.2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcap-ng0 i386 0.9.1-1 [17.8 kB] Fetched 17.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwy2jbwvo/libcap-ng0_0.9.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2025.20250727.75242+ds-5+b2 [159 kB] Fetched 159 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgoqm9gpy/libkpathsea6_2025.20250727.75242+ds-5+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-1+b1 [257 kB] Fetched 257 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnu90sk5f/libssh2-1t64_1.11.1-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprnuea9k1/readline-common_8.3-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc-16-base i386 16-20260308-1 [35.3 kB] Fetched 35.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxaa8rcq9/gcc-16-base_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgirepository-2.0-0 i386 2.87.2-3 [153 kB] Fetched 153 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwoq8ewds/libgirepository-2.0-0_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 perl-base i386 5.40.1-7 [1773 kB] Fetched 1773 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp94qjuv19/perl-base_5.40.1-7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.31 [75.7 kB] Fetched 75.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmn3ksysp/libdebhelper-perl_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b4 [53.9 kB] Fetched 53.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0tx1v333/libpciaccess0_0.17-3+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 systemd-sysv i386 260~rc2-1 [36.9 kB] Fetched 36.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptbxp4ny_/systemd-sysv_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc-i686-linux-gnu i386 4:15.2.0-5 [1428 B] Fetched 1428 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-i686-linux-gnu_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmp1sq9rk3f/gcc-i686-linux-gnu_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfreetype-dev i386 2.14.2+dfsg-1 [681 kB] Fetched 681 kB in 0s (54.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcr3euztt/libfreetype-dev_2.14.2+dfsg-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnghttp3-9 i386 1.15.0-1 [79.2 kB] Fetched 79.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd69n61db/libnghttp3-9_1.15.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (81.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsiynt76r/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.17-1 [174 kB] Fetched 174 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn8rslfut/liblcms2-2_2.17-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 comerr-dev i386 2.1-1.47.4-1 [51.2 kB] Fetched 51.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4oo6fv9n/comerr-dev_2.1-1.47.4-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus-bin i386 1.16.2-4 [81.4 kB] Fetched 81.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_bvp1d7b/dbus-bin_1.16.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.5.3-1+b1 [337 kB] Fetched 337 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp38c30pln/libdav1d7_1.5.3-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libngtcp2-crypto-ossl0 i386 1.21.0-1 [26.8 kB] Fetched 26.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpflt5z69c/libngtcp2-crypto-ossl0_1.21.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tex-common all 6.20 [29.7 kB] Fetched 29.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvdamz1zo/tex-common_6.20_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnss3 i386 2:3.121-1 [1529 kB] Fetched 1529 kB in 0s (112 MB/s) dpkg-name: info: moved 'libnss3_2%3a3.121-1_i386.deb' to '/srv/rebuilderd/tmp/tmpytudfynl/libnss3_3.121-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.30-1 [172 kB] Fetched 172 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmzc0_k4/libthai-data_0.1.30-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgdk-pixbuf-2.0-0 i386 2.44.5+dfsg-4 [102 kB] Fetched 102 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpri4sdns7/libgdk-pixbuf-2.0-0_2.44.5+dfsg-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libc-gconv-modules-extra i386 2.42-13 [1126 kB] Fetched 1126 kB in 0s (91.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpctp8ybhx/libc-gconv-modules-extra_2.42-13_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxext-dev i386 2:1.3.4-1+b4 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmpps_mylld/libxext-dev_1.3.4-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.3+b1 [195 kB] Fetched 195 kB in 0s (0 B/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.3+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp7n9dd9rx/libxt6t64_1.2.1-1.3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdeiavzm2/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-4 [170 kB] Fetched 170 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_i386.deb' to '/srv/rebuilderd/tmp/tmpqzzgxt4e/libjpeg62-turbo_2.1.5-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tk8.6 i386 8.6.17-1+b1 [70.1 kB] Fetched 70.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tmb9rnp/tk8.6_8.6.17-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libasan8 i386 16-20260308-1 [2735 kB] Fetched 2735 kB in 0s (140 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm0kwrqt_/libasan8_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxrandr2 i386 2:1.5.4-1+b4 [37.8 kB] Fetched 37.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmp94zpvkvu/libxrandr2_1.5.4-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.7.4-1 [178 kB] Fetched 178 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgwz99zp/libexpat1-dev_2.7.4-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmime-charset-perl all 1.013.1-2 [34.0 kB] Fetched 34.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeni8h9rr/libmime-charset-perl_1.013.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 grep i386 3.12-1 [451 kB] Fetched 451 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa8y5ubyf/grep_3.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.13-1 [846 kB] Fetched 846 kB in 0s (79.8 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.13-1_i386.deb' to '/srv/rebuilderd/tmp/tmpx5fdfmqf/libx11-6_1.8.13-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Fetched 95.1 kB in 0s (0 B/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_i386.deb' to '/srv/rebuilderd/tmp/tmppsq4wz_u/xfonts-utils_7.7+7_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libncurses6 i386 6.6+20251231-1 [113 kB] Fetched 113 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_1_e0fb5/libncurses6_6.6+20251231-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2025.20250727.75242+ds-5+b2 [52.2 kB] Fetched 52.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvp42kw24/libptexenc1_2025.20250727.75242+ds-5+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-glib-2.0 i386 2.87.2-3 [200 kB] Fetched 200 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi3ctzvjg/gir1.2-glib-2.0_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsframe3 i386 2.46-3 [85.3 kB] Fetched 85.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_2xqgh43/libsframe3_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.2-1 [246 kB] Fetched 246 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrkr3ck3/gettext-base_0.23.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.21-1 [335 kB] Fetched 335 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplrtaz0r8/m4_1.4.21-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1+b3 [23.3 kB] Fetched 23.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b3_i386.deb' to '/srv/rebuilderd/tmp/tmp6p3t23s0/libfontenc1_1.1.8-1+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.14.2+dfsg-1 [502 kB] Fetched 502 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkb9jvbz8/libfreetype6_2.14.2+dfsg-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-18 [113 kB] Fetched 113 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpip_q79_j/libavahi-common-data_0.8-18_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpng-dev i386 1.6.55-1 [375 kB] Fetched 375 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0dlkwgw/libpng-dev_1.6.55-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.22.1-2 [149 kB] Fetched 149 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplc18vbak/libgssapi-krb5-2_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz-subset0 i386 12.3.2-2+b2 [599 kB] Fetched 599 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuki86d4x/libharfbuzz-subset0_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus-session-bus-common all 1.16.2-4 [53.1 kB] Fetched 53.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsd3dtw4j/dbus-session-bus-common_1.16.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (0 B/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmpzpk9e4ed/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnghttp3-dev i386 1.15.0-1 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp_hb4lup/libnghttp3-dev_1.15.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcloudproviders0 i386 0.4.0-2 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5jfl4c3l/libcloudproviders0_0.4.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsmartcols1 i386 2.41.3-4 [154 kB] Fetched 154 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeyzbmuow/libsmartcols1_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-2+b2 [124 kB] Fetched 124 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxpbv_j7n/libxcb-glx0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gcc-15-i686-linux-gnu i386 15.2.0-15 [25.3 MB] Fetched 25.3 MB in 0s (276 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprvllhmzj/gcc-15-i686-linux-gnu_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 lmodern all 2.005-1 [9480 kB] Fetched 9480 kB in 0s (147 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkat8brk0/lmodern_2.005-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 hostname i386 3.25 [11.3 kB] Fetched 11.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wmrtzpk/hostname_3.25_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libngtcp2-16 i386 1.21.0-1 [169 kB] Fetched 169 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp26qd955f/libngtcp2-16_1.21.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.3-4 [185 kB] Fetched 185 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3cmw_w17/libreadline8t64_8.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libldap2 i386 2.6.10+dfsg-1+b1 [209 kB] Fetched 209 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpucbw3vji/libldap2_2.6.10+dfsg-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9fngel35/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libp11-kit0 i386 0.26.2-2 [449 kB] Fetched 449 kB in 0s (43.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqmdc52x9/libp11-kit0_0.26.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.5.5-1 [3008 kB] Fetched 3008 kB in 0s (157 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppszihgsl/libssl-dev_3.5.5-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 cpp-15-i686-linux-gnu i386 15.2.0-15 [12.9 MB] Fetched 12.9 MB in 0s (249 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkq1udaa0/cpp-15-i686-linux-gnu_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkdb5-10t64 i386 1.22.1-2 [46.3 kB] Fetched 46.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9jcktnqf/libkdb5-10t64_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.16.2-4 [193 kB] Fetched 193 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmputqb384j/libdbus-1-3_1.16.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b2 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpznx85eq6/libxcb-render0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libasound2-data all 1.2.15.3-1 [21.2 kB] Fetched 21.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ydkr9v7/libasound2-data_1.2.15.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.131-1 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphazbnton/libdrm-amdgpu1_2.4.131-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-5+b1 [43.8 kB] Fetched 43.8 kB in 0s (0 B/s) dpkg-name: info: moved 'file_1%3a5.46-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpq6ic8jba/file_5.46-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libatk1.0-0t64 i386 2.59.1-2 [52.3 kB] Fetched 52.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpon4pmjm3/libatk1.0-0t64_2.59.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev-bin i386 2.87.2-3 [171 kB] Fetched 171 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zg4724s/libgio-2.0-dev-bin_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtasn1-6 i386 4.21.0-2 [52.2 kB] Fetched 52.2 kB in 0s (5156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmrvjcut/libtasn1-6_4.21.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b2 [148 kB] Fetched 148 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyxsyad9_/libxcb1_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bison i386 2:3.8.2+dfsg-1+b3 [1183 kB] Fetched 1183 kB in 0s (69.7 MB/s) dpkg-name: info: moved 'bison_2%3a3.8.2+dfsg-1+b3_i386.deb' to '/srv/rebuilderd/tmp/tmp5yjz2p97/bison_3.8.2+dfsg-1+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.13-1 [931 kB] Fetched 931 kB in 0s (76.0 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.13-1_i386.deb' to '/srv/rebuilderd/tmp/tmp25u1d7xl/libx11-dev_1.8.13-1_i386.deb' Downloading dependency 260 of 531: libde265-0:i386=1.0.16-1+b1 Downloading dependency 261 of 531: libgraphite2-3:i386=1.3.14-11+b1 Downloading dependency 262 of 531: libfribidi-dev:i386=1.0.16-5 Downloading dependency 263 of 531: libpam-modules:i386=1.7.0-5+b1 Downloading dependency 264 of 531: autopoint:i386=0.23.2-1 Downloading dependency 265 of 531: libfontbox-java:i386=1:1.8.16-5 Downloading dependency 266 of 531: xvfb:i386=2:21.1.21-1 Downloading dependency 267 of 531: libcommons-logging-java:i386=1.3.0-2 Downloading dependency 268 of 531: libxft-dev:i386=2.3.6-1+b5 Downloading dependency 269 of 531: dh-autoreconf:i386=22 Downloading dependency 270 of 531: libgomp1:i386=16-20260308-1 Downloading dependency 271 of 531: libdb5.3t64:i386=5.3.28+dfsg2-11 Downloading dependency 272 of 531: libxaw7:i386=2:1.0.16-1+b1 Downloading dependency 273 of 531: libxcb-randr0:i386=1.17.0-2+b2 Downloading dependency 274 of 531: xauth:i386=1:1.1.2-1.1 Downloading dependency 275 of 531: libgnutls-dane0t64:i386=3.8.12-3 Downloading dependency 276 of 531: libc6-dev:i386=2.42-13 Downloading dependency 277 of 531: libzstd1:i386=1.5.7+dfsg-3+b1 Downloading dependency 278 of 531: libicu78:i386=78.2-2 Downloading dependency 279 of 531: libpkgconf7:i386=2.5.1-4 Downloading dependency 280 of 531: texinfo:i386=7.2-5 Downloading dependency 281 of 531: libdeflate0:i386=1.23-2+b1 Downloading dependency 282 of 531: libcap2:i386=1:2.75-10+b9 Downloading dependency 283 of 531: libheif-plugin-dav1d:i386=1.21.2-3 Downloading dependency 284 of 531: gfortran-15:i386=15.2.0-15 Downloading dependency 285 of 531: libgl1:i386=1.7.0-3 Downloading dependency 286 of 531: libgtk-3-0t64:i386=3.24.51-4 Downloading dependency 287 of 531: libsystemd0:i386=260~rc2-1 Downloading dependency 288 of 531: libpixman-1-dev:i386=0.46.4-1+b1 Downloading dependency 289 of 531: texlive-binaries:i386=2025.20250727.75242+ds-5+b2 Downloading dependency 290 of 531: libdconf1:i386=0.49.0-4 Downloading dependency 291 of 531: nettle-dev:i386=3.10.2-1 Downloading dependency 292 of 531: libxcb-shm0:i386=1.17.0-2+b2 Downloading dependency 293 of 531: libxdamage1:i386=1:1.1.7-1 Downloading dependency 294 of 531: binutils-common:i386=2.46-3 Downloading dependency 295 of 531: sed:i386=4.9-2 Downloading dependency 296 of 531: libmd0:i386=1.1.0-2+b2 Downloading dependency 297 of 531: native-architecture:i386=0.2.6 Downloading dependency 298 of 531: libpangoxft-1.0-0:i386=1.57.0-1 Downloading dependency 299 of 531: liblzma5:i386=5.8.2-2 Downloading dependency 300 of 531: girepository-tools:i386=2.87.2-3 Downloading dependency 301 of 531: libxcb-present0:i386=1.17.0-2+b2 Downloading dependency 302 of 531: libgmpxx4ldbl:i386=2:6.3.0+dfsg-5+b1 Downloading dependency 303 of 531: libpdfbox-java:i386=1:1.8.16-5 Downloading dependency 304 of 531: libglx0:i386=1.7.0-3 Downloading dependency 305 of 531: patch:i386=2.8-2 Downloading dependency 306 of 531: libbinutils:i386=2.46-3 Downloading dependency 307 of 531: dwz:i386=0.16-2 Downloading dependency 308 of 531: libxfont2:i386=1:2.0.6-2 Downloading dependency 309 of 531: libmpc3:i386=1.3.1-2+b1 Downloading dependency 310 of 531: krb5-multidev:i386=1.22.1-2 Downloading dependency 311 of 531: libsynctex2:i386=2025.20250727.75242+ds-5+b2 Downloading dependency 312 of 531: debianutils:i386=5.23.2 Downloading dependency 313 of 531: libcap-ng0:i386=0.9.1-1 Downloading dependency 314 of 531: libkpathsea6:i386=2025.20250727.75242+ds-5+b2 Downloading dependency 315 of 531: libssh2-1t64:i386=1.11.1-1+b1 Downloading dependency 316 of 531: readline-common:i386=8.3-4 Downloading dependency 317 of 531: gcc-16-base:i386=16-20260308-1 Downloading dependency 318 of 531: 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dependency 334 of 531: libthai-data:i386=0.1.30-1 Downloading dependency 335 of 531: libgdk-pixbuf-2.0-0:i386=2.44.5+dfsg-4 Downloading dependency 336 of 531: libc-gconv-modules-extra:i386=2.42-13 Downloading dependency 337 of 531: libxext-dev:i386=2:1.3.4-1+b4 Downloading dependency 338 of 531: libxt6t64:i386=1:1.2.1-1.3+b1 Downloading dependency 339 of 531: debconf:i386=1.5.92 Downloading dependency 340 of 531: libjpeg62-turbo:i386=1:2.1.5-4 Downloading dependency 341 of 531: tk8.6:i386=8.6.17-1+b1 Downloading dependency 342 of 531: libasan8:i386=16-20260308-1 Downloading dependency 343 of 531: libxrandr2:i386=2:1.5.4-1+b4 Downloading dependency 344 of 531: libexpat1-dev:i386=2.7.4-1 Downloading dependency 345 of 531: libmime-charset-perl:i386=1.013.1-2 Downloading dependency 346 of 531: grep:i386=3.12-1 Downloading dependency 347 of 531: libx11-6:i386=2:1.8.13-1 Downloading dependency 348 of 531: xfonts-utils:i386=1:7.7+7 Downloading dependency 349 of 531: libncurses6:i386=6.6+20251231-1 Downloading dependency 350 of 531: libptexenc1:i386=2025.20250727.75242+ds-5+b2 Downloading dependency 351 of 531: gir1.2-glib-2.0:i386=2.87.2-3 Downloading dependency 352 of 531: libsframe3:i386=2.46-3 Downloading dependency 353 of 531: gettext-base:i386=0.23.2-1 Downloading dependency 354 of 531: m4:i386=1.4.21-1 Downloading dependency 355 of 531: libfontenc1:i386=1:1.1.8-1+b3 Downloading dependency 356 of 531: libfreetype6:i386=2.14.2+dfsg-1 Downloading dependency 357 of 531: libavahi-common-data:i386=0.8-18 Downloading dependency 358 of 531: libpng-dev:i386=1.6.55-1 Downloading dependency 359 of 531: libgssapi-krb5-2:i386=1.22.1-2 Downloading dependency 360 of 531: libharfbuzz-subset0:i386=12.3.2-2+b2 Downloading dependency 361 of 531: dbus-session-bus-common:i386=1.16.2-4 Downloading dependency 362 of 531: xorg-sgml-doctools:i386=1:1.11-1.1 Downloading dependency 363 of 531: libnghttp3-dev:i386=1.15.0-1 Downloading dependency 364 of 531: libcloudproviders0:i386=0.4.0-2 Downloading dependency 365 of 531: libsmartcols1:i386=2.41.3-4 Downloading dependency 366 of 531: libxcb-glx0:i386=1.17.0-2+b2 Downloading dependency 367 of 531: gcc-15-i686-linux-gnu:i386=15.2.0-15 Downloading dependency 368 of 531: lmodern:i386=2.005-1 Downloading dependency 369 of 531: hostname:i386=3.25 Downloading dependency 370 of 531: libngtcp2-16:i386=1.21.0-1 Downloading dependency 371 of 531: libreadline8t64:i386=8.3-4 Downloading dependency 372 of 531: libldap2:i386=2.6.10+dfsg-1+b1 Downloading dependency 373 of 531: autotools-dev:i386=20240727.1 Downloading dependency 374 of 531: libp11-kit0:i386=0.26.2-2 Downloading dependency 375 of 531: libssl-dev:i386=3.5.5-1 Downloading dependency 376 of 531: cpp-15-i686-linux-gnu:i386=15.2.0-15 Downloading dependency 377 of 531: libkdb5-10t64:i386=1.22.1-2 Downloading dependency 378 of 531: libdbus-1-3:i386=1.16.2-4 Downloading dependency 379 of 531: libxcb-render0:i386=1.17.0-2+b2 Downloading dependency 380 of 531: libasound2-data:i386=1.2.15.3-1 Downloading dependency 381 of 531: libdrm-amdgpu1:i386=2.4.131-1 Downloading dependency 382 of 531: file:i386=1:5.46-5+b1 Downloading dependency 383 of 531: libatk1.0-0t64:i386=2.59.1-2 Downloading dependency 384 of 531: libgio-2.0-dev-bin:i386=2.87.2-3 Downloading dependency 385 of 531: libtasn1-6:i386=4.21.0-2 Downloading dependency 386 of 531: libxcb1:i386=1.17.0-2+b2 Downloading dependency 387 of 531: bison:i386=2:3.8.2+dfsg-1+b3 Downloading dependency 388 of 531: libx11-dev:i386=2:1.8.13-1 Downloading dependency 389 of 531: make:i386=4.4.1-3Get:1 http://deb.debian.org/debian unstable/main i386 make i386 4.4.1-3 [470 kB] Fetched 470 kB in 0s (43.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp70xk6k35/make_4.4.1-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openjdk-25-jre-headless i386 25.0.3~5ea-1 [38.2 MB] Fetched 38.2 MB in 0s (284 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5cykj1g/openjdk-25-jre-headless_25.0.3~5ea-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libice-dev i386 2:1.1.1-1+b1 [78.8 kB] Fetched 78.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmppi9_rk15/libice-dev_1.1.1-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libstdc++6 i386 16-20260308-1 [800 kB] Fetched 800 kB in 0s (60.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfz25imxi/libstdc++6_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libudev1 i386 260~rc2-1 [136 kB] Fetched 136 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk789gtbp/libudev1_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwayland-egl1 i386 1.24.0-2+b2 [6284 B] Fetched 6284 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzvv5bylu/libwayland-egl1_1.24.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 icu-devtools i386 78.2-2 [219 kB] Fetched 219 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2mrsn3s0/icu-devtools_78.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libunicode-linebreak-perl i386 0.0.20190101-3 [97.4 kB] Fetched 97.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhxiwxfd/libunicode-linebreak-perl_0.0.20190101-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-7+b1 [2161 kB] Fetched 2161 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpad2z8xwy/liblapack3_3.12.1-7+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgcc-s1 i386 16-20260308-1 [88.0 kB] Fetched 88.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxagj3sup/libgcc-s1_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 systemd i386 260~rc2-1 [3269 kB] Fetched 3269 kB in 0s (163 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4uvegf7n/systemd_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.4.2-1 [473 kB] Fetched 473 kB in 0s (45.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdme88qx/libunistring5_1.4.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 debhelper all 13.31 [932 kB] Fetched 932 kB in 0s (81.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpruaopvyt/debhelper_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsqlite3-0 i386 3.46.1-9+b1 [990 kB] Fetched 990 kB in 0s (86.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdc7g7nw/libsqlite3-0_3.46.1-9+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gir1.2-freedesktop i386 1.86.0-6 [61.4 kB] Fetched 61.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9o0muvja/gir1.2-freedesktop_1.86.0-6_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqcrr0oib/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-base all 2025.20260124-1 [23.1 MB] Fetched 23.1 MB in 0s (80.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwjqlewwt/texlive-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdatrie-dev i386 0.2.14-1 [20.6 kB] Fetched 20.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpej8rz7zn/libdatrie-dev_0.2.14-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglib2.0-bin i386 2.87.2-3 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb8tbyjim/libglib2.0-bin_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openjdk-25-jdk i386 25.0.3~5ea-1 [8556 B] Fetched 8556 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfqxs26mt/openjdk-25-jdk_25.0.3~5ea-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpsl-dev i386 0.21.2-1.1+b2 [103 kB] Fetched 103 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp85jlwl2n/libpsl-dev_0.21.2-1.1+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 mpack i386 1.6-19 [39.2 kB] Fetched 39.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3dyjtyir/mpack_1.6-19_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libunwind8 i386 1.8.1-0.2 [55.1 kB] Fetched 55.1 kB in 0s (5427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu7dfm2yl/libunwind8_1.8.1-0.2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (162 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp03psjdxt/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20260223 [158 kB] Fetched 158 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe7gok2dg/ca-certificates_20260223_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libncursesw6 i386 6.6+20251231-1 [148 kB] Fetched 148 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwzn11_i9/libncursesw6_6.6+20251231-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-2+b2 [186 kB] Fetched 186 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53phquqr/libxcb1-dev_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 cpp i386 4:15.2.0-5 [1564 B] Fetched 1564 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmppbcan4g9/cpp_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tk8.6-dev i386 8.6.17-1+b1 [875 kB] Fetched 875 kB in 0s (62.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0t2kt_x_/tk8.6-dev_8.6.17-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 26.0.1-2 [49.1 kB] Fetched 49.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkk14fpm5/libgbm1_26.0.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 cpp-i686-linux-gnu i386 4:15.2.0-5 [5316 B] Fetched 5316 B in 0s (0 B/s) dpkg-name: info: moved 'cpp-i686-linux-gnu_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmpo365_v2o/cpp-i686-linux-gnu_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.2-1 [1718 kB] Fetched 1718 kB in 0s (105 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7d61usc4/gettext_0.23.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 cpp-15 i386 15.2.0-15 [1276 B] Fetched 1276 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8cisw225/cpp-15_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgdbm-compat4t64 i386 1.26-1+b1 [53.6 kB] Fetched 53.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp23aok7rv/libgdbm-compat4t64_1.26-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.12-1 [776 kB] Fetched 776 kB in 0s (70.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpry6q03zq/python3.13_3.13.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dconf-service i386 0.49.0-4 [36.5 kB] Fetched 36.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp92naliff/dconf-service_0.49.0-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 g++-15-i686-linux-gnu i386 15.2.0-15 [14.0 MB] Fetched 14.0 MB in 0s (226 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4d5hjy9/g++-15-i686-linux-gnu_15.2.0-15_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 sysvinit-utils i386 3.15-6 [35.6 kB] Fetched 35.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi5mr_k7v/sysvinit-utils_3.15-6_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa3_13hdk/fonts-lmodern_2.005-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwebp-dev i386 1.5.0-0.1+b1 [474 kB] Fetched 474 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkdunu435/libwebp-dev_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bubblewrap i386 0.11.0-2 [53.8 kB] Fetched 53.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk4mrbg4r/bubblewrap_0.11.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libitm1 i386 16-20260308-1 [28.9 kB] Fetched 28.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1xg9bqa/libitm1_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-4 [61.1 kB] Fetched 61.1 kB in 0s (0 B/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-4_i386.deb' to '/srv/rebuilderd/tmp/tmpu0f2x7da/libxmu6_1.1.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg+really1.3.1-3 [85.1 kB] Fetched 85.1 kB in 0s (0 B/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-3_i386.deb' to '/srv/rebuilderd/tmp/tmpam0lc2ga/zlib1g_1.3.dfsg+really1.3.1-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2025.20260124-1 [4992 kB] Fetched 4992 kB in 0s (131 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptupsowyj/texlive-fonts-recommended_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcrypt1 i386 1:4.5.1-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_i386.deb' to '/srv/rebuilderd/tmp/tmpii6kafdh/libcrypt1_4.5.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgnutls28-dev i386 3.8.12-3 [1505 kB] Fetched 1505 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_vpcozzf/libgnutls28-dev_3.8.12-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libatomic1 i386 16-20260308-1 [8172 B] Fetched 8172 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnk65e0s4/libatomic1_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.12-1 [2305 kB] Fetched 2305 kB in 0s (147 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphvv40964/python3.13-minimal_3.13.12-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfuv7v5qi/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjxl0.11 i386 0.11.1-6 [1285 kB] Fetched 1285 kB in 0s (98.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsf0_sb94/libjxl0.11_0.11.1-6_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-render0-dev i386 1.17.0-2+b2 [119 kB] Fetched 119 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6srnvvl3/libxcb-render0-dev_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtiffxx6 i386 4.7.1-1 [175 kB] Fetched 175 kB in 0s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5zxa_1bl/libtiffxx6_4.7.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 base-files i386 14 [72.9 kB] Fetched 72.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4e4b2pl/base-files_14_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libllvm21 i386 1:21.1.8-5 [32.2 MB] Fetched 32.2 MB in 0s (277 MB/s) dpkg-name: info: moved 'libllvm21_1%3a21.1.8-5_i386.deb' to '/srv/rebuilderd/tmp/tmp8y593byd/libllvm21_21.1.8-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libdeflate-dev i386 1.23-2+b1 [57.4 kB] Fetched 57.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5klth1m8/libdeflate-dev_1.23-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcre2-32-0 i386 10.46-1+b1 [266 kB] Fetched 266 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4vmdofno/libpcre2-32-0_10.46-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bash-completion all 1:2.16.0-8 [319 kB] Fetched 319 kB in 0s (29.9 MB/s) dpkg-name: info: moved 'bash-completion_1%3a2.16.0-8_all.deb' to '/srv/rebuilderd/tmp/tmpm4q3ah59/bash-completion_2.16.0-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ew3vn8z/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dpkg-dev all 1.23.7 [1318 kB] Fetched 1318 kB in 0s (89.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnb8ihj5v/dpkg-dev_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libnghttp2-dev i386 1.68.0-2 [126 kB] Fetched 126 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp48x6s16a/libnghttp2-dev_1.68.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjbig-dev i386 2.1-6.1+b3 [31.4 kB] Fetched 31.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoqnbmpbs/libjbig-dev_2.1-6.1+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsystemd-shared i386 260~rc2-1 [2467 kB] Fetched 2467 kB in 0s (152 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgtt6g23q/libsystemd-shared_260~rc2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcurl4-openssl-dev i386 8.19.0~rc3-1 [594 kB] Fetched 594 kB in 0s (49.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj4cwvgxg/libcurl4-openssl-dev_8.19.0~rc3-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5td6c2cg/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5+b1 [187 kB] Fetched 187 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgaoch98o/liblerc4_4.0.0+ds-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-5+b1 [118 kB] Fetched 118 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp4dqs15y8/libmagic1t64_5.46-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtk8.6 i386 8.6.17-1+b1 [838 kB] Fetched 838 kB in 0s (75.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprm9w7o74/libtk8.6_8.6.17-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libattr1 i386 1:2.5.2-4 [23.3 kB] Fetched 23.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-4_i386.deb' to '/srv/rebuilderd/tmp/tmpbcfzqocs/libattr1_2.5.2-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.41.3-4 [103 kB] Fetched 103 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsa7wsqf6/bsdextrautils_2.41.3-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 automake all 1:1.18.1-4 [877 kB] Fetched 877 kB in 0s (79.4 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmp0pf6xt9v/automake_1.18.1-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2025.20250727.75242+ds-5+b2 [127 kB] Fetched 127 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3s4zf4tb/libtexlua53-5_2025.20250727.75242+ds-5+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz7a_6_is/libxcb-sync1_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmpfr6 i386 4.2.2-2+b1 [757 kB] Fetched 757 kB in 0s (68.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwx1bt9de/libmpfr6_4.2.2-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libunbound8 i386 1.24.2-1 [648 kB] Fetched 648 kB in 0s (60.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqs6c08f7/libunbound8_1.24.2-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgdk-pixbuf2.0-common all 2.44.5+dfsg-4 [315 kB] Fetched 315 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbcf0yt_u/libgdk-pixbuf2.0-common_2.44.5+dfsg-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 openssl i386 3.5.5-1 [1505 kB] Fetched 1505 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5qgljbt/openssl_3.5.5-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libselinux-dev i386 3.9-4+b1 [179 kB] Fetched 179 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2d0us8a/libselinux-dev_3.9-4+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.17.1-5 [142 kB] Fetched 142 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_98c4c9/libfontconfig1_2.17.1-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-3+b1 [62.5 kB] Fetched 62.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcmr5480m/librtmp1_2.4+20151223.gitfa8646d.1-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 pango1.0-tools i386 1.57.0-1 [45.3 kB] Fetched 45.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpph8fsqtd/pango1.0-tools_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-2+b1 [135 kB] Fetched 135 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fevik0y/libbsd0_0.12.2-2+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b3 [24.5 kB] Fetched 24.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpio284ncf/libpotrace0_1.16-2+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libtiff-dev i386 4.7.1-1 [525 kB] Fetched 525 kB in 0s (41.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmc5bb86/libtiff-dev_4.7.1-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libfontconfig-dev i386 2.17.1-5 [169 kB] Fetched 169 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3mrwtawg/libfontconfig-dev_2.17.1-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 findutils i386 4.10.0-3 [714 kB] Fetched 714 kB in 0s (63.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8ia90ly/findutils_4.10.0-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpcre2-8-0 i386 10.46-1+b1 [295 kB] Fetched 295 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvavw18nl/libpcre2-8-0_10.46-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xkb-data all 2.46-2 [830 kB] Fetched 830 kB in 0s (74.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuuaisasc/xkb-data_2.46-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 gzip i386 1.13-1 [139 kB] Fetched 139 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpknx4c978/gzip_1.13-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxinerama1 i386 2:1.1.4-3+b5 [16.2 kB] Fetched 16.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b5_i386.deb' to '/srv/rebuilderd/tmp/tmp3aw7i0v8/libxinerama1_1.1.4-3+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b4 [58.4 kB] Fetched 58.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmpjkv9f88l/libxpm4_3.5.17-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 g++-i686-linux-gnu i386 4:15.2.0-5 [1192 B] Fetched 1192 B in 0s (117 kB/s) dpkg-name: info: moved 'g++-i686-linux-gnu_4%3a15.2.0-5_i386.deb' to '/srv/rebuilderd/tmp/tmpgwp8xyoo/g++-i686-linux-gnu_15.2.0-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1+b1 [21.1 kB] Fetched 21.1 kB in 0s (1977 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmp5y0_6s1f/libxau6_1.0.11-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxft2 i386 2.3.6-1+b5 [55.2 kB] Fetched 55.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmrmoxnbe/libxft2_2.3.6-1+b5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libapparmor1 i386 4.1.6-3 [37.1 kB] Fetched 37.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc5mofhi8/libapparmor1_4.1.6-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpango1.0-dev i386 1.57.0-1 [156 kB] Fetched 156 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvijni3h4/libpango1.0-dev_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwayland-cursor0 i386 1.24.0-2+b2 [13.0 kB] Fetched 13.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_umtxmjs/libwayland-cursor0_1.24.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libacl1 i386 2.3.2-3 [34.1 kB] Fetched 34.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcl4fmcck/libacl1_2.3.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.87.2-3 [1619 kB] Fetched 1619 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kbluot8/libglib2.0-0t64_2.87.2-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libkrb5-dev i386 1.22.1-2 [16.1 kB] Fetched 16.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy4kw4tgq/libkrb5-dev_1.22.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-10 [20.8 kB] Fetched 20.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpds7pu5jn/libsasl2-modules-db_2.1.28+dfsg1-10_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tzdata all 2026a-1 [259 kB] Fetched 259 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn1y0d840/tzdata_2026a-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 ncurses-bin i386 6.6+20251231-1 [447 kB] Fetched 447 kB in 0s (43.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp404f0fye/ncurses-bin_6.6+20251231-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqrmzy7yr/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 26.0.1-2 [41.5 kB] Fetched 41.5 kB in 0s (3403 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiuegjw4y/libgl1-mesa-dri_26.0.1-2_i386.deb' Get:1 http://snapshot.debian.org/archive/debian/20260308T142930Z Debian13.3/main i386 ucf all 3.0052 [43.3 kB] Fetched 43.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpazxbieq_/ucf_3.0052_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libngtcp2-dev i386 1.21.0-1 [230 kB] Fetched 230 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt5lywxkf/libngtcp2-dev_1.21.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-luatex all 2025.20260124-1 [36.9 MB] Fetched 36.9 MB in 1s (71.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkeum_yjt/texlive-luatex_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8c_7rv8g/python3-minimal_3.13.9-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.57.0-1 [237 kB] Fetched 237 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp80xug6ad/libpango-1.0-0_1.57.0-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 shared-mime-info i386 2.4-5+b3 [760 kB] Fetched 760 kB in 0s (65.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm_aut9zf/shared-mime-info_2.4-5+b3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgmp10 i386 2:6.3.0+dfsg-5+b1 [572 kB] Fetched 572 kB in 0s (52.2 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpuyxrboo6/libgmp10_6.3.0+dfsg-5+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.5.2-3+b1 [23.9 kB] Fetched 23.9 kB in 0s (2295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpteuflgp_/libffi8_3.5.2-3+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 mesa-libgallium i386 26.0.1-2 [10.7 MB] Fetched 10.7 MB in 0s (240 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_tuzbf3p/mesa-libgallium_26.0.1-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 33-2 [5852 B] Fetched 5852 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcws9l3y0/libapache-pom-java_33-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo-dev i386 1:2.1.5-4 [304 kB] Fetched 304 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_i386.deb' to '/srv/rebuilderd/tmp/tmp3k7ysy_q/libjpeg62-turbo-dev_2.1.5-4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcairo-script-interpreter2 i386 1.18.4-3 [63.2 kB] Fetched 63.2 kB in 0s (5993 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpekcp21k6/libcairo-script-interpreter2_1.18.4-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 liblzo2-2 i386 2.10-3+b2 [58.1 kB] Fetched 58.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmnfx2em3/liblzo2-2_2.10-3+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libselinux1 i386 3.9-4+b1 [89.2 kB] Fetched 89.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5sm3ivej/libselinux1_3.9-4+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libicu-dev i386 78.2-2 [11.3 MB] Fetched 11.3 MB in 0s (247 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwj02is0h/libicu-dev_78.2-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 12.3.2-2+b2 [532 kB] Fetched 532 kB in 0s (41.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphfqwrnbw/libharfbuzz0b_12.3.2-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3.3-1+b1 [11.4 kB] Fetched 11.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcryc38n/libxshmfence1_1.3.3-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0o5hdlve/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.5-2 [44.5 kB] Fetched 44.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-2_i386.deb' to '/srv/rebuilderd/tmp/tmpgyy339h8/libxdmcp-dev_1.1.5-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1+b1 [128 kB] Fetched 128 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1uk76bq/libwebpmux3_1.5.0-0.1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgprofng0 i386 2.46-3 [857 kB] Fetched 857 kB in 0s (76.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmpkwwda/libgprofng0_2.46-3_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxss1 i386 1:1.2.3-1+b4 [17.2 kB] Fetched 17.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b4_i386.deb' to '/srv/rebuilderd/tmp/tmpwso_ceq3/libxss1_1.2.3-1+b4_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libmount-dev i386 2.41.3-4 [32.1 kB] Fetched 32.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwi1irkat/libmount-dev_2.41.3-4_i386.deb' Downloading dependency 390 of 531: openjdk-25-jre-headless:i386=25.0.3~5ea-1 Downloading dependency 391 of 531: libice-dev:i386=2:1.1.1-1+b1 Downloading dependency 392 of 531: libstdc++6:i386=16-20260308-1 Downloading dependency 393 of 531: libudev1:i386=260~rc2-1 Downloading dependency 394 of 531: libwayland-egl1:i386=1.24.0-2+b2 Downloading dependency 395 of 531: icu-devtools:i386=78.2-2 Downloading dependency 396 of 531: libunicode-linebreak-perl:i386=0.0.20190101-3 Downloading dependency 397 of 531: liblapack3:i386=3.12.1-7+b1 Downloading dependency 398 of 531: libgcc-s1:i386=16-20260308-1 Downloading dependency 399 of 531: systemd:i386=260~rc2-1 Downloading dependency 400 of 531: libunistring5:i386=1.4.2-1 Downloading dependency 401 of 531: debhelper:i386=13.31 Downloading dependency 402 of 531: libsqlite3-0:i386=3.46.1-9+b1 Downloading dependency 403 of 531: gir1.2-freedesktop:i386=1.86.0-6 Downloading dependency 404 of 531: libfile-stripnondeterminism-perl:i386=1.15.0-1 Downloading dependency 405 of 531: texlive-base:i386=2025.20260124-1 Downloading dependency 406 of 531: libdatrie-dev:i386=0.2.14-1 Downloading dependency 407 of 531: libglib2.0-bin:i386=2.87.2-3 Downloading dependency 408 of 531: openjdk-25-jdk:i386=25.0.3~5ea-1 Downloading dependency 409 of 531: libpsl-dev:i386=0.21.2-1.1+b2 Downloading dependency 410 of 531: mpack:i386=1.6-19 Downloading dependency 411 of 531: libunwind8:i386=1.8.1-0.2 Downloading dependency 412 of 531: perl-modules-5.40:i386=5.40.1-7 Downloading dependency 413 of 531: ca-certificates:i386=20260223 Downloading dependency 414 of 531: libncursesw6:i386=6.6+20251231-1 Downloading dependency 415 of 531: libxcb1-dev:i386=1.17.0-2+b2 Downloading dependency 416 of 531: cpp:i386=4:15.2.0-5 Downloading dependency 417 of 531: tk8.6-dev:i386=8.6.17-1+b1 Downloading dependency 418 of 531: libgbm1:i386=26.0.1-2 Downloading dependency 419 of 531: cpp-i686-linux-gnu:i386=4:15.2.0-5 Downloading dependency 420 of 531: gettext:i386=0.23.2-1 Downloading dependency 421 of 531: cpp-15:i386=15.2.0-15 Downloading dependency 422 of 531: libgdbm-compat4t64:i386=1.26-1+b1 Downloading dependency 423 of 531: python3.13:i386=3.13.12-1 Downloading dependency 424 of 531: dconf-service:i386=0.49.0-4 Downloading dependency 425 of 531: g++-15-i686-linux-gnu:i386=15.2.0-15 Downloading dependency 426 of 531: sysvinit-utils:i386=3.15-6 Downloading dependency 427 of 531: fonts-lmodern:i386=2.005-1 Downloading dependency 428 of 531: libwebp-dev:i386=1.5.0-0.1+b1 Downloading dependency 429 of 531: bubblewrap:i386=0.11.0-2 Downloading dependency 430 of 531: libitm1:i386=16-20260308-1 Downloading dependency 431 of 531: libxmu6:i386=2:1.1.3-4 Downloading dependency 432 of 531: zlib1g:i386=1:1.3.dfsg+really1.3.1-3 Downloading dependency 433 of 531: texlive-fonts-recommended:i386=2025.20260124-1 Downloading dependency 434 of 531: libcrypt1:i386=1:4.5.1-1 Downloading dependency 435 of 531: libgnutls28-dev:i386=3.8.12-3 Downloading dependency 436 of 531: libatomic1:i386=16-20260308-1 Downloading dependency 437 of 531: python3.13-minimal:i386=3.13.12-1 Downloading dependency 438 of 531: intltool-debian:i386=0.35.0+20060710.6 Downloading dependency 439 of 531: libjxl0.11:i386=0.11.1-6 Downloading dependency 440 of 531: libxcb-render0-dev:i386=1.17.0-2+b2 Downloading dependency 441 of 531: libtiffxx6:i386=4.7.1-1 Downloading dependency 442 of 531: base-files:i386=14 Downloading dependency 443 of 531: libllvm21:i386=1:21.1.8-5 Downloading dependency 444 of 531: libdeflate-dev:i386=1.23-2+b1 Downloading dependency 445 of 531: libpcre2-32-0:i386=10.46-1+b1 Downloading dependency 446 of 531: bash-completion:i386=1:2.16.0-8 Downloading dependency 447 of 531: libxml-namespacesupport-perl:i386=1.12-2 Downloading dependency 448 of 531: dpkg-dev:i386=1.23.7 Downloading dependency 449 of 531: libnghttp2-dev:i386=1.68.0-2 Downloading dependency 450 of 531: libjbig-dev:i386=2.1-6.1+b3 Downloading dependency 451 of 531: libsystemd-shared:i386=260~rc2-1 Downloading dependency 452 of 531: libcurl4-openssl-dev:i386=8.19.0~rc3-1 Downloading dependency 453 of 531: dh-strip-nondeterminism:i386=1.15.0-1 Downloading dependency 454 of 531: liblerc4:i386=4.0.0+ds-5+b1 Downloading dependency 455 of 531: libmagic1t64:i386=1:5.46-5+b1 Downloading dependency 456 of 531: libtk8.6:i386=8.6.17-1+b1 Downloading dependency 457 of 531: libattr1:i386=1:2.5.2-4 Downloading dependency 458 of 531: bsdextrautils:i386=2.41.3-4 Downloading dependency 459 of 531: automake:i386=1:1.18.1-4 Downloading dependency 460 of 531: libtexlua53-5:i386=2025.20250727.75242+ds-5+b2 Downloading dependency 461 of 531: libxcb-sync1:i386=1.17.0-2+b2 Downloading dependency 462 of 531: libmpfr6:i386=4.2.2-2+b1 Downloading dependency 463 of 531: libunbound8:i386=1.24.2-1 Downloading dependency 464 of 531: libgdk-pixbuf2.0-common:i386=2.44.5+dfsg-4 Downloading dependency 465 of 531: openssl:i386=3.5.5-1 Downloading dependency 466 of 531: libselinux-dev:i386=3.9-4+b1 Downloading dependency 467 of 531: libfontconfig1:i386=2.17.1-5 Downloading dependency 468 of 531: librtmp1:i386=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 469 of 531: pango1.0-tools:i386=1.57.0-1 Downloading dependency 470 of 531: libbsd0:i386=0.12.2-2+b1 Downloading dependency 471 of 531: libpotrace0:i386=1.16-2+b3 Downloading dependency 472 of 531: libtiff-dev:i386=4.7.1-1 Downloading dependency 473 of 531: libfontconfig-dev:i386=2.17.1-5 Downloading dependency 474 of 531: findutils:i386=4.10.0-3 Downloading dependency 475 of 531: libpcre2-8-0:i386=10.46-1+b1 Downloading dependency 476 of 531: xkb-data:i386=2.46-2 Downloading dependency 477 of 531: gzip:i386=1.13-1 Downloading dependency 478 of 531: libxinerama1:i386=2:1.1.4-3+b5 Downloading dependency 479 of 531: libxpm4:i386=1:3.5.17-1+b4 Downloading dependency 480 of 531: g++-i686-linux-gnu:i386=4:15.2.0-5 Downloading dependency 481 of 531: libxau6:i386=1:1.0.11-1+b1 Downloading dependency 482 of 531: libxft2:i386=2.3.6-1+b5 Downloading dependency 483 of 531: libapparmor1:i386=4.1.6-3 Downloading dependency 484 of 531: libpango1.0-dev:i386=1.57.0-1 Downloading dependency 485 of 531: libwayland-cursor0:i386=1.24.0-2+b2 Downloading dependency 486 of 531: libacl1:i386=2.3.2-3 Downloading dependency 487 of 531: libglib2.0-0t64:i386=2.87.2-3 Downloading dependency 488 of 531: libkrb5-dev:i386=1.22.1-2 Downloading dependency 489 of 531: libsasl2-modules-db:i386=2.1.28+dfsg1-10 Downloading dependency 490 of 531: tzdata:i386=2026a-1 Downloading dependency 491 of 531: ncurses-bin:i386=6.6+20251231-1 Downloading dependency 492 of 531: libpam-runtime:i386=1.7.0-5 Downloading dependency 493 of 531: libgl1-mesa-dri:i386=26.0.1-2 Downloading dependency 494 of 531: ucf:i386=3.0052 Downloading dependency 495 of 531: libngtcp2-dev:i386=1.21.0-1 Downloading dependency 496 of 531: texlive-luatex:i386=2025.20260124-1 Downloading dependency 497 of 531: python3-minimal:i386=3.13.9-3 Downloading dependency 498 of 531: libpango-1.0-0:i386=1.57.0-1 Downloading dependency 499 of 531: shared-mime-info:i386=2.4-5+b3 Downloading dependency 500 of 531: libgmp10:i386=2:6.3.0+dfsg-5+b1 Downloading dependency 501 of 531: libffi8:i386=3.5.2-3+b1 Downloading dependency 502 of 531: mesa-libgallium:i386=26.0.1-2 Downloading dependency 503 of 531: libapache-pom-java:i386=33-2 Downloading dependency 504 of 531: libjpeg62-turbo-dev:i386=1:2.1.5-4 Downloading dependency 505 of 531: libcairo-script-interpreter2:i386=1.18.4-3 Downloading dependency 506 of 531: liblzo2-2:i386=2.10-3+b2 Downloading dependency 507 of 531: libselinux1:i386=3.9-4+b1 Downloading dependency 508 of 531: libicu-dev:i386=78.2-2 Downloading dependency 509 of 531: libharfbuzz0b:i386=12.3.2-2+b2 Downloading dependency 510 of 531: libxshmfence1:i386=1.3.3-1+b1 Downloading dependency 511 of 531: init-system-helpers:i386=1.69 Downloading dependency 512 of 531: libxdmcp-dev:i386=1:1.1.5-2 Downloading dependency 513 of 531: libwebpmux3:i386=1.5.0-0.1+b1 Downloading dependency 514 of 531: libgprofng0:i386=2.46-3 Downloading dependency 515 of 531: libxss1:i386=1:1.2.3-1+b4 Downloading dependency 516 of 531: libmount-dev:i386=2.41.3-4 Downloading dependency 517 of 531: preview-latex-style:i386=13.2-1.1Get:1 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1.1 [350 kB] Fetched 350 kB in 0s (31.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu8huesth/preview-latex-style_13.2-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 dbus-system-bus-common all 1.16.2-4 [54.1 kB] Fetched 54.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokha0agt/dbus-system-bus-common_1.16.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (44.5 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmp07lqidrc/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libasound2t64 i386 1.2.15.3-1 [420 kB] Fetched 420 kB in 0s (41.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp81u716sz/libasound2t64_1.2.15.3-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcc1-0 i386 16-20260308-1 [46.6 kB] Fetched 46.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8259vcak/libcc1-0_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.19.0~rc3-1 [455 kB] Fetched 455 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8l8dr9v3/libcurl4t64_8.19.0~rc3-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-2+b2 [110 kB] Fetched 110 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_wdf7fv/libxcb-xfixes0_1.17.0-2+b2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libubsan1 i386 16-20260308-1 [1108 kB] Fetched 1108 kB in 0s (92.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwx9ekvfx/libubsan1_16-20260308-1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libgraphite2-dev i386 1.3.14-11+b1 [21.1 kB] Fetched 21.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5kexbi4/libgraphite2-dev_1.3.14-11+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 tcl8.6 i386 8.6.17+dfsg-1+b1 [121 kB] Fetched 121 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplh0actmb/tcl8.6_8.6.17+dfsg-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.46.4-1+b1 [259 kB] Fetched 259 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxkt5s1r/libpixman-1-0_0.46.4-1+b1_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libintl-perl all 1.37-1 [696 kB] Fetched 696 kB in 0s (57.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3_b7s1p/libintl-perl_1.37-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texinfo-lib i386 7.2-5 [839 kB] Fetched 839 kB in 0s (63.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcdzjcdrw/texinfo-lib_7.2-5_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2025.20260124-1 [23.6 MB] Fetched 23.6 MB in 0s (80.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ko8ytpx/texlive-pictures_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libharfbuzz-dev i386 12.3.2-2+b2 [149 kB] Fetched 149 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprd98bot8/libharfbuzz-dev_12.3.2-2+b2_i386.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture amd64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp4r76ttgu/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: i386 is different from amd64 but can be executed natively I: using /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp 127.0.0.1 - - [11/Mar/2026 16:19:23] code 404, message File not found 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:46881 ./ InRelease 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:46881 ./ Release [462 B] 127.0.0.1 - - [11/Mar/2026 16:19:23] code 404, message File not found 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:46881 ./ Release.gpg 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:46881 ./ Packages [825 kB] Fetched 825 kB in 0s (42.8 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./gcc-16-base_16-20260308-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libc-gconv-modules-extra_2.42-13_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libc6_2.42-13_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libgcc-s1_16-20260308-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./mawk_1.3.4.20260302-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./base-files_14_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libtinfo6_6.6%2b20251231-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./debianutils_5.23.2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./bash_5.3-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libacl1_2.3.2-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libattr1_2.5.2-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libgmp10_6.3.0%2bdfsg-5%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libpcre2-8-0_10.46-1%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libselinux1_3.9-4%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libzstd1_1.5.7%2bdfsg-3%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libssl3t64_3.5.5-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./openssl-provider-legacy_3.5.5-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libsystemd0_260%7erc2-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./coreutils_9.10-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./dash_0.5.12-12_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./diffutils_3.12-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libbz2-1.0_1.0.8-6%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./liblzma5_5.8.2-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libmd0_1.1.0-2%2bb2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./tar_1.35%2bdfsg-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./dpkg_1.23.7_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./findutils_4.10.0-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./grep_3.12-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./gzip_1.13-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./hostname_3.25_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./ncurses-bin_6.6%2b20251231-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libcrypt1_4.5.1-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./perl-base_5.40.1-7_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./sed_4.9-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libcap-ng0_0.9.1-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libaudit1_4.1.2-1%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libdb5.3t64_5.3.28%2bdfsg2-11_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./debconf_1.5.92_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libpam0g_1.7.0-5%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libpam-modules-bin_1.7.0-5%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libpam-modules_1.7.0-5%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libblkid1_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libmount1_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libsmartcols1_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libudev1_260%7erc2-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libuuid1_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./util-linux_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libdebconfclient0_0.282%2bb2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./base-passwd_3.6.8_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./libc-bin_2.42-13_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./ncurses-base_6.6%2b20251231-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:23] "GET /./sysvinit-utils_3.15-6_i386.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp 127.0.0.1 - - [11/Mar/2026 16:19:24] code 404, message File not found 127.0.0.1 - - [11/Mar/2026 16:19:24] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:46881 ./ InRelease 127.0.0.1 - - [11/Mar/2026 16:19:24] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:46881 ./ Release 127.0.0.1 - - [11/Mar/2026 16:19:24] code 404, message File not found 127.0.0.1 - - [11/Mar/2026 16:19:24] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:46881 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./mount_2.41.3-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./libsystemd-shared_260%7erc2-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./systemd_260%7erc2-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./systemd-sysv_260%7erc2-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./libdbus-1-3_1.16.2-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./dbus-bin_1.16.2-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./dbus-session-bus-common_1.16.2-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:37] "GET /./libapparmor1_4.1.6-3_i386.deb HTTP/1.1" 200 - 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127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libpsl-dev_0.21.2-1.1%2bb2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./mpack_1.6-19_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./tk8.6-dev_8.6.17-1%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libwebpmux3_1.5.0-0.1%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libwebp-dev_1.5.0-0.1%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./texlive-fonts-recommended_2025.20260124-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libtiffxx6_4.7.1-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libdeflate-dev_1.23-2%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libnghttp2-dev_1.68.0-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libjbig-dev_2.1-6.1%2bb3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libcurl4t64_8.19.0%7erc3-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libkrb5-dev_1.22.1-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libngtcp2-dev_1.21.0-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./libcurl4-openssl-dev_8.19.0%7erc3-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:48] "GET /./pango1.0-tools_1.57.0-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./libtiff-dev_4.7.1-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./libgraphite2-dev_1.3.14-11%2bb1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./libicu-dev_78.2-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./libharfbuzz-dev_12.3.2-2%2bb2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./libpango1.0-dev_1.57.0-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Mar/2026 16:19:49] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp4r76ttgu/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp Reading package lists... Building dependency tree... Reading state information... tcl8.6-dev is already the newest version (8.6.17+dfsg-1+b1). tcl8.6-dev set to manually installed. libthai0 is already the newest version (0.1.30-1). libthai0 set to manually installed. libidn2-dev is already the newest version (2.3.8-4+b1). libidn2-dev set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. util-linux is already the newest version (2.41.3-4). libsharpyuv0 is already the newest version (1.5.0-0.1+b1). libsharpyuv0 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libcairo2-dev is already the newest version (1.18.4-3). libcairo2-dev set to manually installed. libnghttp2-14 is already the newest version (1.68.0-2). libnghttp2-14 set to manually installed. libctf-nobfd0 is already the newest version (2.46-3). libctf-nobfd0 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b1). libxrender1 set to manually installed. libp11-kit-dev is already the newest version (0.26.2-2). libp11-kit-dev set to manually installed. libctf0 is already the newest version (2.46-3). libctf0 set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. libedit2 is already the newest version (3.1-20251016-1). libedit2 set to manually installed. libharfbuzz-icu0 is already the newest version (12.3.2-2+b2). libharfbuzz-icu0 set to manually installed. libsepol-dev is already the newest version (3.9-2). libsepol-dev set to manually installed. libxcomposite1 is already the newest version (1:0.4.6-1+b1). libxcomposite1 set to manually installed. libtirpc3t64 is already the newest version (1.3.6+ds-1). libtirpc3t64 set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b1). libgdbm6t64 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). xz-utils is already the newest version (5.8.2-2). xz-utils set to manually installed. libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. libglib2.0-dev-bin is already the newest version (2.87.2-3). libglib2.0-dev-bin set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. libmagic-mgc is already the newest version (1:5.46-5+b1). libmagic-mgc set to manually installed. libwebp7 is already the newest version (1.5.0-0.1+b1). libwebp7 set to manually installed. libpcre2-16-0 is already the newest version (10.46-1+b1). libpcre2-16-0 set to manually installed. libavahi-client3 is already the newest version (0.8-18). libavahi-client3 set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. libffi-dev is already the newest version (3.5.2-3+b1). libffi-dev set to manually installed. libxkbcommon0 is already the newest version (1.13.1-1). libxkbcommon0 set to manually installed. libgnutls30t64 is already the newest version (3.8.12-3). libgnutls30t64 set to manually installed. autoconf is already the newest version (2.72-6). autoconf set to manually installed. libdrm2 is already the newest version (2.4.131-1). libdrm2 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). base-passwd is already the newest version (3.6.8). libharfbuzz-gobject0 is already the newest version (12.3.2-2+b2). libharfbuzz-gobject0 set to manually installed. libepoxy0 is already the newest version (1.5.10-2+b1). libepoxy0 set to manually installed. fontconfig-config is already the newest version (2.17.1-5). fontconfig-config set to manually installed. libreadline-dev is already the newest version (8.3-4). libreadline-dev set to manually installed. libtirpc-common is already the newest version (1.3.6+ds-1). libtirpc-common set to manually installed. adwaita-icon-theme is already the newest version (50~alpha-1). adwaita-icon-theme set to manually installed. mount is already the newest version (2.41.3-4). mount set to manually installed. libxrender-dev is already the newest version (1:0.9.12-1+b1). libxrender-dev set to manually installed. libteckit0 is already the newest version (2.5.13+ds-1). libteckit0 set to manually installed. libcommons-parent-java is already the newest version (56-1). libcommons-parent-java set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b2). libxcb-dri3-0 set to manually installed. libuuid1 is already the newest version (2.41.3-4). gir1.2-glib-2.0-dev is already the newest version (2.87.2-3). gir1.2-glib-2.0-dev set to manually installed. libpcsclite1 is already the newest version (2.4.1-1). libpcsclite1 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-15). libgcc-15-dev set to manually installed. libgif7 is already the newest version (5.2.2-1+b2). libgif7 set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. libpcre2-posix3 is already the newest version (10.46-1+b1). libpcre2-posix3 set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-2). libkadm5srv-mit12 set to manually installed. libheif-plugin-libde265 is already the newest version (1.21.2-3). libheif-plugin-libde265 set to manually installed. libthai-dev is already the newest version (0.1.30-1). libthai-dev set to manually installed. librsvg2-2 is already the newest version (2.61.3+dfsg-3+b1). librsvg2-2 set to manually installed. libpangocairo-1.0-0 is already the newest version (1.57.0-1). libpangocairo-1.0-0 set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libnspr4 is already the newest version (2:4.38.2-1). libnspr4 set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5+b1). liblerc-dev set to manually installed. libblkid-dev is already the newest version (2.41.3-4). libblkid-dev set to manually installed. libc-dev-bin is already the newest version (2.42-13). libc-dev-bin set to manually installed. libdrm-intel1 is already the newest version (2.4.131-1). libdrm-intel1 set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. python3 is already the newest version (3.13.9-3). python3 set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b1). libuchardet0 set to manually installed. gtk-update-icon-cache is already the newest version (4.21.6+ds-1). gtk-update-icon-cache set to manually installed. gfortran-i686-linux-gnu is already the newest version (4:15.2.0-5). gfortran-i686-linux-gnu set to manually installed. texlive-extra-utils is already the newest version (2025.20260124-1). texlive-extra-utils set to manually installed. libwayland-client0 is already the newest version (1.24.0-2+b2). libwayland-client0 set to manually installed. gcc-15-base is already the newest version (15.2.0-15). gcc-15-base set to manually installed. binutils-i686-linux-gnu is already the newest version (2.46-3). binutils-i686-linux-gnu set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. libz3-4 is already the newest version (4.13.3-1+b1). libz3-4 set to manually installed. default-jdk-headless is already the newest version (2:1.25-77). default-jdk-headless set to manually installed. dconf-gsettings-backend is already the newest version (0.49.0-4). dconf-gsettings-backend set to manually installed. libyaml-tiny-perl is already the newest version (1.76-1). libyaml-tiny-perl set to manually installed. libhwy1t64 is already the newest version (1.3.0-2). libhwy1t64 set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-2). libkadm5clnt-mit12 set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. dbus is already the newest version (1.16.2-4). dbus set to manually installed. libice6 is already the newest version (2:1.1.1-1+b1). libice6 set to manually installed. diffutils is already the newest version (1:3.12-1). libgssrpc4t64 is already the newest version (1.22.1-2). libgssrpc4t64 set to manually installed. libblas3 is already the newest version (3.12.1-7+b1). libblas3 set to manually installed. uuid-dev is already the newest version (2.41.3-4). uuid-dev set to manually installed. libsombok3 is already the newest version (2.4.0-2+b3). libsombok3 set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libsysprof-capture-4-dev is already the newest version (50~beta-1). libsysprof-capture-4-dev set to manually installed. libsensors5 is already the newest version (1:3.6.2-2+b1). libsensors5 set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. t1utils is already the newest version (1.41-4). t1utils set to manually installed. gir1.2-harfbuzz-0.0 is already the newest version (12.3.2-2+b2). gir1.2-harfbuzz-0.0 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. libncurses-dev is already the newest version (6.6+20251231-1). libncurses-dev set to manually installed. libgfortran-15-dev is already the newest version (15.2.0-15). libgfortran-15-dev set to manually installed. libkrb5support0 is already the newest version (1.22.1-2). libkrb5support0 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.13-1). libx11-xcb1 set to manually installed. libxcb-shm0-dev is already the newest version (1.17.0-2+b2). libxcb-shm0-dev set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. libcairo-gobject2 is already the newest version (1.18.4-3). libcairo-gobject2 set to manually installed. libexpat1 is already the newest version (2.7.4-1). libexpat1 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libfribidi0 is already the newest version (1.0.16-5). libfribidi0 set to manually installed. libquadmath0 is already the newest version (16-20260308-1). libquadmath0 set to manually installed. texlive-plain-generic is already the newest version (2025.20260124-1). texlive-plain-generic set to manually installed. libheif1 is already the newest version (1.21.2-3). libheif1 set to manually installed. libidn2-0 is already the newest version (2.3.8-4+b1). libidn2-0 set to manually installed. x11proto-dev is already the newest version (2025.1-1). x11proto-dev set to manually installed. libcairo2 is already the newest version (1.18.4-3). libcairo2 set to manually installed. libpangoft2-1.0-0 is already the newest version (1.57.0-1). libpangoft2-1.0-0 set to manually installed. texlive-latex-recommended is already the newest version (2025.20260124-1). texlive-latex-recommended set to manually installed. libc-bin is already the newest version (2.42-13). libdebconfclient0 is already the newest version (0.282+b2). libtasn1-6-dev is already the newest version (4.21.0-2). libtasn1-6-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-3). zlib1g-dev set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1+b1). libssh2-1-dev set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-3+b1). libzstd-dev set to manually installed. libdrm-common is already the newest version (2.4.131-1). libdrm-common set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.21.0-1). libngtcp2-crypto-ossl-dev set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5+b1). libglib2.0-dev is already the newest version (2.87.2-3). libglib2.0-dev set to manually installed. pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. g++-15 is already the newest version (15.2.0-15). g++-15 set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9+b1). libproc2-0 set to manually installed. libpcre2-dev is already the newest version (10.46-1+b1). libpcre2-dev set to manually installed. bash is already the newest version (5.3-2). g++ is already the newest version (4:15.2.0-5). g++ set to manually installed. ncurses-base is already the newest version (6.6+20251231-1). libtcl8.6 is already the newest version (8.6.17+dfsg-1+b1). libtcl8.6 set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1+b1). libldap-dev set to manually installed. libcups2t64 is already the newest version (2.4.16-1). libcups2t64 set to manually installed. texlive-latex-extra is already the newest version (2025.20260124-1). texlive-latex-extra set to manually installed. binutils is already the newest version (2.46-3). binutils set to manually installed. libpython3.13-stdlib is already the newest version (3.13.12-1). libpython3.13-stdlib set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b3). libpaper-utils set to manually installed. ca-certificates-java is already the newest version (20240118). ca-certificates-java set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b5). libtext-charwidth-perl set to manually installed. libcom-err2 is already the newest version (1.47.4-1). libcom-err2 set to manually installed. openjdk-25-jre is already the newest version (25.0.3~5ea-1). openjdk-25-jre set to manually installed. python3-packaging is already the newest version (25.0-2). python3-packaging set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libavahi-common3 is already the newest version (0.8-18). libavahi-common3 set to manually installed. libgio-2.0-dev is already the newest version (2.87.2-3). libgio-2.0-dev set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-2). libxxf86vm1 set to manually installed. linux-libc-dev is already the newest version (6.19.6-1). linux-libc-dev set to manually installed. openjdk-25-jdk-headless is already the newest version (25.0.3~5ea-1). openjdk-25-jdk-headless set to manually installed. libxau-dev is already the newest version (1:1.0.11-1+b1). libxau-dev set to manually installed. libc6 is already the newest version (2.42-13). coreutils is already the newest version (9.10-1). libglib2.0-data is already the newest version (2.87.2-3). libglib2.0-data set to manually installed. libgfortran5 is already the newest version (16-20260308-1). libgfortran5 set to manually installed. glycin-thumbnailers is already the newest version (2.0.8-1). glycin-thumbnailers set to manually installed. libmount1 is already the newest version (2.41.3-4). bzip2 is already the newest version (1.0.8-6+b1). bzip2 set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. libbz2-dev is already the newest version (1.0.8-6+b1). libbz2-dev set to manually installed. xfonts-base is already the newest version (1:1.0.5+nmu1). xfonts-base set to manually installed. gcc is already the newest version (4:15.2.0-5). gcc set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1+b1). libsharpyuv-dev set to manually installed. libxkbfile1 is already the newest version (1:1.1.0-1+b5). libxkbfile1 set to manually installed. libsm-dev is already the newest version (2:1.2.6-1+b1). libsm-dev set to manually installed. libpam-systemd is already the newest version (260~rc2-1). libpam-systemd set to manually installed. libbrotli-dev is already the newest version (1.2.0-3). libbrotli-dev set to manually installed. texlive-latex-base is already the newest version (2025.20260124-1). texlive-latex-base set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libharfbuzz-cairo0 is already the newest version (12.3.2-2+b2). libharfbuzz-cairo0 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-2). libxdmcp6 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libfile-homedir-perl is already the newest version (1.006-2). libfile-homedir-perl set to manually installed. libxtst6 is already the newest version (2:1.2.5-1+b1). libxtst6 set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. gir1.2-freedesktop-dev is already the newest version (1.86.0-6). gir1.2-freedesktop-dev set to manually installed. libpython3-stdlib is already the newest version (3.13.9-3). libpython3-stdlib set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1+b1). libxcursor1 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp-dev set to manually installed. dbus-user-session is already the newest version (1.16.2-4). dbus-user-session set to manually installed. libblkid1 is already the newest version (2.41.3-4). libpaper2 is already the newest version (2.2.5-0.3+b3). libpaper2 set to manually installed. dbus-daemon is already the newest version (1.16.2-4). dbus-daemon set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. libcolord2 is already the newest version (1.4.8-3). libcolord2 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6+b1). libkeyutils1 set to manually installed. libxi6 is already the newest version (2:1.8.2-2). libxi6 set to manually installed. default-jdk is already the newest version (2:1.25-77). default-jdk set to manually installed. libglycin-2-0 is already the newest version (2.0.8-1). libglycin-2-0 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b5). libxfixes3 set to manually installed. mawk is already the newest version (1.3.4.20260302-1). at-spi2-common is already the newest version (2.59.1-2). at-spi2-common set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. liblapack-dev is already the newest version (3.12.1-7+b1). liblapack-dev set to manually installed. xserver-common is already the newest version (2:21.1.21-1). xserver-common set to manually installed. libx11-data is already the newest version (2:1.8.13-1). libx11-data set to manually installed. gcc-15 is already the newest version (15.2.0-15). gcc-15 set to manually installed. libglvnd0 is already the newest version (1.7.0-3). libglvnd0 set to manually installed. dash is already the newest version (0.5.12-12). procps is already the newest version (2:4.0.4-9+b1). procps set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-15). libstdc++-15-dev set to manually installed. dpkg is already the newest version (1.23.7). libdatrie1 is already the newest version (0.2.14-1). libdatrie1 set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1+b1). libwebpdecoder3 set to manually installed. openssl-provider-legacy is already the newest version (3.5.5-1). libxmuu1 is already the newest version (2:1.1.3-4). libxmuu1 set to manually installed. gfortran is already the newest version (4:15.2.0-5). gfortran set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. libxss-dev is already the newest version (1:1.2.3-1+b4). libxss-dev set to manually installed. libglx-mesa0 is already the newest version (26.0.1-2). libglx-mesa0 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b2). libevent-2.1-7t64 set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b2). libpsl5t64 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. libsepol2 is already the newest version (3.9-2). libsepol2 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b3). libjbig0 set to manually installed. gfortran-15-i686-linux-gnu is already the newest version (15.2.0-15). gfortran-15-i686-linux-gnu set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libvulkan1 is already the newest version (1.4.341.0-1). libvulkan1 set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b1). libsm6 set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. libpython3.13-minimal is already the newest version (3.13.12-1). libpython3.13-minimal set to manually installed. default-jre-headless is already the newest version (2:1.25-77). default-jre-headless set to manually installed. libssl3t64 is already the newest version (3.5.5-1). libatk-bridge2.0-0t64 is already the newest version (2.59.1-2). libatk-bridge2.0-0t64 set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-7). libxml-libxml-perl set to manually installed. libxt-dev is already the newest version (1:1.2.1-1.3+b1). libxt-dev set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-4+b1). libmpfi0 set to manually installed. libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. texlive-fonts-extra is already the newest version (2025.20260124-1). texlive-fonts-extra set to manually installed. x11-xkb-utils is already the newest version (7.7+9). x11-xkb-utils set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b1). libgmp-dev set to manually installed. default-jre is already the newest version (2:1.25-77). default-jre set to manually installed. libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. liblzma-dev is already the newest version (5.8.2-2). liblzma-dev set to manually installed. glycin-loaders is already the newest version (2.0.8-1). glycin-loaders set to manually installed. java-common is already the newest version (0.77). java-common set to manually installed. tar is already the newest version (1.35+dfsg-4). libblas-dev is already the newest version (3.12.1-7+b1). libblas-dev set to manually installed. libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. libisl23 is already the newest version (0.27-1+b1). libisl23 set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1+b1). libwebpdemux2 set to manually installed. libgtk-3-common is already the newest version (3.24.51-4). libgtk-3-common set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. libatspi2.0-0t64 is already the newest version (2.59.1-2). libatspi2.0-0t64 set to manually installed. libpam0g is already the newest version (1.7.0-5+b1). gir1.2-pango-1.0 is already the newest version (1.57.0-1). gir1.2-pango-1.0 set to manually installed. libpng16-16t64 is already the newest version (1.6.55-1). libpng16-16t64 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b1). libbrotli1 is already the newest version (1.2.0-3). libbrotli1 set to manually installed. libde265-0 is already the newest version (1.0.16-1+b1). libde265-0 set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11+b1). libgraphite2-3 set to manually installed. libfribidi-dev is already the newest version (1.0.16-5). libfribidi-dev set to manually installed. libpam-modules is already the newest version (1.7.0-5+b1). autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libfontbox-java is already the newest version (1:1.8.16-5). libfontbox-java set to manually installed. xvfb is already the newest version (2:21.1.21-1). xvfb set to manually installed. libcommons-logging-java is already the newest version (1.3.0-2). libcommons-logging-java set to manually installed. libxft-dev is already the newest version (2.3.6-1+b5). libxft-dev set to manually installed. dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libgomp1 is already the newest version (16-20260308-1). libgomp1 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). libxaw7 is already the newest version (2:1.0.16-1+b1). libxaw7 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b2). libxcb-randr0 set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.12-3). libgnutls-dane0t64 set to manually installed. libc6-dev is already the newest version (2.42-13). libc6-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-3+b1). libicu78 is already the newest version (78.2-2). libicu78 set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. texinfo is already the newest version (7.2-5). texinfo set to manually installed. libdeflate0 is already the newest version (1.23-2+b1). libdeflate0 set to manually installed. libcap2 is already the newest version (1:2.75-10+b9). libcap2 set to manually installed. libheif-plugin-dav1d is already the newest version (1.21.2-3). libheif-plugin-dav1d set to manually installed. gfortran-15 is already the newest version (15.2.0-15). gfortran-15 set to manually installed. libgl1 is already the newest version (1.7.0-3). libgl1 set to manually installed. libgtk-3-0t64 is already the newest version (3.24.51-4). libgtk-3-0t64 set to manually installed. libsystemd0 is already the newest version (260~rc2-1). libpixman-1-dev is already the newest version (0.46.4-1+b1). libpixman-1-dev set to manually installed. texlive-binaries is already the newest version (2025.20250727.75242+ds-5+b2). texlive-binaries set to manually installed. libdconf1 is already the newest version (0.49.0-4). libdconf1 set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. libxdamage1 is already the newest version (1:1.1.7-1). libxdamage1 set to manually installed. binutils-common is already the newest version (2.46-3). binutils-common set to manually installed. sed is already the newest version (4.9-2). libmd0 is already the newest version (1.1.0-2+b2). native-architecture is already the newest version (0.2.6). native-architecture set to manually installed. libpangoxft-1.0-0 is already the newest version (1.57.0-1). libpangoxft-1.0-0 set to manually installed. liblzma5 is already the newest version (5.8.2-2). girepository-tools is already the newest version (2.87.2-3). girepository-tools set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b2). libxcb-present0 set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b1). libgmpxx4ldbl set to manually installed. libpdfbox-java is already the newest version (1:1.8.16-5). libpdfbox-java set to manually installed. libglx0 is already the newest version (1.7.0-3). libglx0 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libbinutils is already the newest version (2.46-3). libbinutils set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libxfont2 is already the newest version (1:2.0.6-2). libxfont2 set to manually installed. libmpc3 is already the newest version (1.3.1-2+b1). libmpc3 set to manually installed. krb5-multidev is already the newest version (1.22.1-2). krb5-multidev set to manually installed. libsynctex2 is already the newest version (2025.20250727.75242+ds-5+b2). libsynctex2 set to manually installed. debianutils is already the newest version (5.23.2). libcap-ng0 is already the newest version (0.9.1-1). libkpathsea6 is already the newest version (2025.20250727.75242+ds-5+b2). libkpathsea6 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1+b1). libssh2-1t64 set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. gcc-16-base is already the newest version (16-20260308-1). libgirepository-2.0-0 is already the newest version (2.87.2-3). libgirepository-2.0-0 set to manually installed. perl-base is already the newest version (5.40.1-7). libdebhelper-perl is already the newest version (13.31). libdebhelper-perl set to manually installed. libpciaccess0 is already the newest version (0.17-3+b4). libpciaccess0 set to manually installed. systemd-sysv is already the newest version (260~rc2-1). systemd-sysv set to manually installed. gcc-i686-linux-gnu is already the newest version (4:15.2.0-5). gcc-i686-linux-gnu set to manually installed. libfreetype-dev is already the newest version (2.14.2+dfsg-1). libfreetype-dev set to manually installed. libnghttp3-9 is already the newest version (1.15.0-1). libnghttp3-9 set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. liblcms2-2 is already the newest version (2.17-1). liblcms2-2 set to manually installed. comerr-dev is already the newest version (2.1-1.47.4-1). comerr-dev set to manually installed. dbus-bin is already the newest version (1.16.2-4). dbus-bin set to manually installed. libdav1d7 is already the newest version (1.5.3-1+b1). libdav1d7 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.21.0-1). libngtcp2-crypto-ossl0 set to manually installed. tex-common is already the newest version (6.20). tex-common set to manually installed. libnss3 is already the newest version (2:3.121-1). libnss3 set to manually installed. libthai-data is already the newest version (0.1.30-1). libthai-data set to manually installed. libgdk-pixbuf-2.0-0 is already the newest version (2.44.5+dfsg-4). libgdk-pixbuf-2.0-0 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-13). libxext-dev is already the newest version (2:1.3.4-1+b4). libxext-dev set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.3+b1). libxt6t64 set to manually installed. debconf is already the newest version (1.5.92). libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. tk8.6 is already the newest version (8.6.17-1+b1). tk8.6 set to manually installed. libasan8 is already the newest version (16-20260308-1). libasan8 set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b4). libxrandr2 set to manually installed. libexpat1-dev is already the newest version (2.7.4-1). libexpat1-dev set to manually installed. libmime-charset-perl is already the newest version (1.013.1-2). libmime-charset-perl set to manually installed. grep is already the newest version (3.12-1). libx11-6 is already the newest version (2:1.8.13-1). libx11-6 set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libncurses6 is already the newest version (6.6+20251231-1). libncurses6 set to manually installed. libptexenc1 is already the newest version (2025.20250727.75242+ds-5+b2). libptexenc1 set to manually installed. gir1.2-glib-2.0 is already the newest version (2.87.2-3). gir1.2-glib-2.0 set to manually installed. libsframe3 is already the newest version (2.46-3). libsframe3 set to manually installed. gettext-base is already the newest version (0.23.2-1). gettext-base set to manually 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libtasn1-6 is already the newest version (4.21.0-2). libtasn1-6 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b2). libxcb1 set to manually installed. bison is already the newest version (2:3.8.2+dfsg-1+b3). bison set to manually installed. libx11-dev is already the newest version (2:1.8.13-1). libx11-dev set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. openjdk-25-jre-headless is already the newest version (25.0.3~5ea-1). openjdk-25-jre-headless set to manually installed. libice-dev is already the newest version (2:1.1.1-1+b1). libice-dev set to manually installed. libstdc++6 is already the newest version (16-20260308-1). libstdc++6 set to manually installed. libudev1 is already the newest version (260~rc2-1). libwayland-egl1 is already the newest version (1.24.0-2+b2). libwayland-egl1 set to manually installed. icu-devtools is already the newest version (78.2-2). icu-devtools set to manually installed. libunicode-linebreak-perl is already the newest version (0.0.20190101-3). libunicode-linebreak-perl set to manually installed. liblapack3 is already the newest version (3.12.1-7+b1). liblapack3 set to manually installed. libgcc-s1 is already the newest version (16-20260308-1). systemd is already the newest version (260~rc2-1). systemd set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. debhelper is already the newest version (13.31). debhelper set to manually installed. libsqlite3-0 is already the newest version (3.46.1-9+b1). libsqlite3-0 set to manually installed. gir1.2-freedesktop is already the newest version (1.86.0-6). gir1.2-freedesktop set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. texlive-base is already the newest version (2025.20260124-1). texlive-base set to manually installed. libdatrie-dev is already the newest version (0.2.14-1). libdatrie-dev set to manually installed. libglib2.0-bin is already the newest version (2.87.2-3). libglib2.0-bin set to manually installed. openjdk-25-jdk is already the newest version (25.0.3~5ea-1). openjdk-25-jdk set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b2). libpsl-dev set to manually installed. mpack is already the newest version (1.6-19). mpack set to manually installed. libunwind8 is already the newest version (1.8.1-0.2). libunwind8 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. ca-certificates is already the newest version (20260223). ca-certificates set to manually installed. libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b2). libxcb1-dev set to manually installed. cpp is already the newest version (4:15.2.0-5). cpp set to manually installed. tk8.6-dev is already the newest version (8.6.17-1+b1). tk8.6-dev set to manually installed. libgbm1 is already the newest version (26.0.1-2). libgbm1 set to manually installed. cpp-i686-linux-gnu is already the newest version (4:15.2.0-5). cpp-i686-linux-gnu set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. cpp-15 is already the newest version (15.2.0-15). cpp-15 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b1). libgdbm-compat4t64 set to manually installed. python3.13 is already the newest version (3.13.12-1). python3.13 set to manually installed. dconf-service is already the newest version (0.49.0-4). dconf-service set to manually installed. g++-15-i686-linux-gnu is already the newest version (15.2.0-15). g++-15-i686-linux-gnu set to manually installed. sysvinit-utils is already the newest version (3.15-6). fonts-lmodern is already the newest version (2.005-1). fonts-lmodern set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1+b1). libwebp-dev set to manually installed. bubblewrap is already the newest version (0.11.0-2). bubblewrap set to manually installed. libitm1 is already the newest version (16-20260308-1). libitm1 set to manually installed. libxmu6 is already the newest version (2:1.1.3-4). libxmu6 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-3). texlive-fonts-recommended is already the newest version (2025.20260124-1). texlive-fonts-recommended set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libgnutls28-dev is already the newest version (3.8.12-3). libgnutls28-dev set to manually installed. libatomic1 is already the newest version (16-20260308-1). libatomic1 set to manually installed. python3.13-minimal is already the newest version (3.13.12-1). python3.13-minimal set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libjxl0.11 is already the newest version (0.11.1-6). libjxl0.11 set to manually installed. libxcb-render0-dev is already the newest version (1.17.0-2+b2). libxcb-render0-dev set to manually installed. libtiffxx6 is already the newest version (4.7.1-1). libtiffxx6 set to manually installed. base-files is already the newest version (14). libllvm21 is already the newest version (1:21.1.8-5). libllvm21 set to manually installed. libdeflate-dev is already the newest version (1.23-2+b1). libdeflate-dev set to manually installed. libpcre2-32-0 is already the newest version (10.46-1+b1). libpcre2-32-0 set to manually installed. bash-completion is already the newest version (1:2.16.0-8). bash-completion set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. libnghttp2-dev is already the newest version (1.68.0-2). libnghttp2-dev set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b3). libjbig-dev set to manually installed. libsystemd-shared is already the newest version (260~rc2-1). libsystemd-shared set to manually installed. libcurl4-openssl-dev is already the newest version (8.19.0~rc3-1). libcurl4-openssl-dev set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5+b1). liblerc4 set to manually installed. libmagic1t64 is already the newest version (1:5.46-5+b1). libmagic1t64 set to manually installed. libtk8.6 is already the newest version (8.6.17-1+b1). libtk8.6 set to manually installed. libattr1 is already the newest version (1:2.5.2-4). bsdextrautils is already the newest version (2.41.3-4). bsdextrautils set to manually installed. automake is already the newest version (1:1.18.1-4). automake set to manually installed. libtexlua53-5 is already the newest version (2025.20250727.75242+ds-5+b2). libtexlua53-5 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b2). libxcb-sync1 set to manually installed. libmpfr6 is already the newest version (4.2.2-2+b1). libmpfr6 set to manually installed. libunbound8 is already the newest version (1.24.2-1). libunbound8 set to manually installed. libgdk-pixbuf2.0-common is already the newest version (2.44.5+dfsg-4). libgdk-pixbuf2.0-common set to manually installed. openssl is already the newest version (3.5.5-1). openssl set to manually installed. libselinux-dev is already the newest version (3.9-4+b1). libselinux-dev set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp1 set to manually installed. pango1.0-tools is already the newest version (1.57.0-1). pango1.0-tools set to manually installed. libbsd0 is already the newest version (0.12.2-2+b1). libbsd0 set to manually installed. libpotrace0 is already the newest version (1.16-2+b3). libpotrace0 set to manually installed. libtiff-dev is already the newest version (4.7.1-1). libtiff-dev set to manually installed. libfontconfig-dev is already the newest version (2.17.1-5). libfontconfig-dev set to manually installed. findutils is already the newest version (4.10.0-3). libpcre2-8-0 is already the newest version (10.46-1+b1). xkb-data is already the newest version (2.46-2). xkb-data set to manually installed. gzip is already the newest version (1.13-1). libxinerama1 is already the newest version (2:1.1.4-3+b5). libxinerama1 set to manually installed. libxpm4 is already the newest version (1:3.5.17-1+b4). libxpm4 set to manually installed. g++-i686-linux-gnu is already the newest version (4:15.2.0-5). g++-i686-linux-gnu set to manually installed. libxau6 is already the newest version (1:1.0.11-1+b1). libxau6 set to manually installed. libxft2 is already the newest version (2.3.6-1+b5). libxft2 set to manually installed. libapparmor1 is already the newest version (4.1.6-3). libapparmor1 set to manually installed. libpango1.0-dev is already the newest version (1.57.0-1). libpango1.0-dev set to manually installed. libwayland-cursor0 is already the newest version (1.24.0-2+b2). libwayland-cursor0 set to manually installed. libacl1 is already the newest version (2.3.2-3). libglib2.0-0t64 is already the newest version (2.87.2-3). libglib2.0-0t64 set to manually installed. libkrb5-dev is already the newest version (1.22.1-2). libkrb5-dev set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. tzdata is already the newest version (2026a-1). tzdata set to manually installed. ncurses-bin is already the newest version (6.6+20251231-1). libpam-runtime is already the newest version (1.7.0-5). libgl1-mesa-dri is already the newest version (26.0.1-2). libgl1-mesa-dri set to manually installed. ucf is already the newest version (3.0052). ucf set to manually installed. libngtcp2-dev is already the newest version (1.21.0-1). libngtcp2-dev set to manually installed. texlive-luatex is already the newest version (2025.20260124-1). texlive-luatex set to manually installed. python3-minimal is already the newest version (3.13.9-3). python3-minimal set to manually installed. libpango-1.0-0 is already the newest version (1.57.0-1). libpango-1.0-0 set to manually installed. shared-mime-info is already the newest version (2.4-5+b3). shared-mime-info set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b1). libffi8 is already the newest version (3.5.2-3+b1). libffi8 set to manually installed. mesa-libgallium is already the newest version (26.0.1-2). mesa-libgallium set to manually installed. libapache-pom-java is already the newest version (33-2). libapache-pom-java set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libcairo-script-interpreter2 is already the newest version (1.18.4-3). libcairo-script-interpreter2 set to manually installed. liblzo2-2 is already the newest version (2.10-3+b2). liblzo2-2 set to manually installed. libselinux1 is already the newest version (3.9-4+b1). libicu-dev is already the newest version (78.2-2). libicu-dev set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2+b2). libharfbuzz0b set to manually installed. libxshmfence1 is already the newest version (1.3.3-1+b1). libxshmfence1 set to manually installed. init-system-helpers is already the newest version (1.69). libxdmcp-dev is already the newest version (1:1.1.5-2). libxdmcp-dev set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1+b1). libwebpmux3 set to manually installed. libgprofng0 is already the newest version (2.46-3). libgprofng0 set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b4). libxss1 set to manually installed. libmount-dev is already the newest version (2.41.3-4). libmount-dev set to manually installed. preview-latex-style is already the newest version (13.2-1.1). preview-latex-style set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-4). dbus-system-bus-common set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libasound2t64 is already the newest version (1.2.15.3-1). libasound2t64 set to manually installed. libcc1-0 is already the newest version (16-20260308-1). libcc1-0 set to manually installed. libcurl4t64 is already the newest version (8.19.0~rc3-1). libcurl4t64 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b2). libxcb-xfixes0 set to manually installed. libubsan1 is already the newest version (16-20260308-1). libubsan1 set to manually installed. libgraphite2-dev is already the newest version (1.3.14-11+b1). libgraphite2-dev set to manually installed. tcl8.6 is already the newest version (8.6.17+dfsg-1+b1). tcl8.6 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b1). libpixman-1-0 set to manually installed. libintl-perl is already the newest version (1.37-1). libintl-perl set to manually installed. texinfo-lib is already the newest version (7.2-5). texinfo-lib set to manually installed. texlive-pictures is already the newest version (2025.20260124-1). texlive-pictures set to manually installed. libharfbuzz-dev is already the newest version (12.3.2-2+b2). libharfbuzz-dev set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp (Reading database ... 176819 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.HJFJU596pp... I: success in 544.1357 seconds Downloading dependency 518 of 531: dbus-system-bus-common:i386=1.16.2-4 Downloading dependency 519 of 531: xfonts-encodings:i386=1:1.0.4-2.2 Downloading dependency 520 of 531: libasound2t64:i386=1.2.15.3-1 Downloading dependency 521 of 531: libcc1-0:i386=16-20260308-1 Downloading dependency 522 of 531: libcurl4t64:i386=8.19.0~rc3-1 Downloading dependency 523 of 531: libxcb-xfixes0:i386=1.17.0-2+b2 Downloading dependency 524 of 531: libubsan1:i386=16-20260308-1 Downloading dependency 525 of 531: libgraphite2-dev:i386=1.3.14-11+b1 Downloading dependency 526 of 531: tcl8.6:i386=8.6.17+dfsg-1+b1 Downloading dependency 527 of 531: libpixman-1-0:i386=0.46.4-1+b1 Downloading dependency 528 of 531: libintl-perl:i386=1.37-1 Downloading dependency 529 of 531: texinfo-lib:i386=7.2-5 Downloading dependency 530 of 531: texlive-pictures:i386=2025.20260124-1 Downloading dependency 531 of 531: libharfbuzz-dev:i386=12.3.2-2+b2 env --chdir=/srv/rebuilderd/tmp/rebuilderdwiQqd1/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1773229321 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildB8shRy/debrebuild.sbuildrc.lsGGvYJ9IbKg sbuild --build=i386 --host=i386 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildB8shRy/debrebuild.tar.QyqkTs5ISEkN --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=r-base-4.5.3 /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on infom08-amd64 +==============================================================================+ | r-base 4.5.3-1 (i386) Wed, 11 Mar 2026 16:28:28 +0000 | +==============================================================================+ Package: r-base Version: 4.5.3-1 Source Version: 4.5.3-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildB8shRy/debrebuild.tar.QyqkTs5ISEkN to /srv/rebuilderd/tmp/tmp.sbuild.gJCAjyDd8n... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Wed, 11 Mar 2026 16:28:48 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Wed, 11 Mar 2026 16:28:50 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk | openjdk-10-jdk, mpack, bash-completion, libtirpc-dev, build-essential Filtered Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack, bash-completion, libtirpc-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-4BZLcf/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Wed, 11 Mar 2026 16:28:54 +0000 | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any all) +------------------------------------------------------------------------------+ | Build environment Wed, 11 Mar 2026 16:28:54 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.73+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.73-1 (2026-02-17) amd64 (x86_64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-15_15.2.0-15 gcc-15_15.2.0-15 libc6-dev_2.42-13 libstdc++-15-dev_15.2.0-15 libstdc++6_16-20260308-1 linux-libc-dev_6.19.6-1 Package versions: adwaita-icon-theme_50~alpha-1 at-spi2-common_2.59.1-2 autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-2 bash-completion_1:2.16.0-8 binutils_2.46-3 binutils-common_2.46-3 binutils-i686-linux-gnu_2.46-3 bison_2:3.8.2+dfsg-1+b3 bsdextrautils_2.41.3-4 bubblewrap_0.11.0-2 build-essential_12.12 bzip2_1.0.8-6+b1 ca-certificates_20260223 ca-certificates-java_20240118 comerr-dev_2.1-1.47.4-1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-15 cpp-15-i686-linux-gnu_15.2.0-15 cpp-i686-linux-gnu_4:15.2.0-5 dash_0.5.12-12 dbus_1.16.2-4 dbus-bin_1.16.2-4 dbus-daemon_1.16.2-4 dbus-session-bus-common_1.16.2-4 dbus-system-bus-common_1.16.2-4 dbus-user-session_1.16.2-4 dconf-gsettings-backend_0.49.0-4 dconf-service_0.49.0-4 debconf_1.5.92 debhelper_13.31 debianutils_5.23.2 default-jdk_2:1.25-77 default-jdk-headless_2:1.25-77 default-jre_2:1.25-77 default-jre-headless_2:1.25-77 dh-autoreconf_22 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-2 file_1:5.46-5+b1 findutils_4.10.0-3 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:15.2.0-5 g++-15_15.2.0-15 g++-15-i686-linux-gnu_15.2.0-15 g++-i686-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-15 gcc-15-base_15.2.0-15 gcc-15-i686-linux-gnu_15.2.0-15 gcc-16-base_16-20260308-1 gcc-i686-linux-gnu_4:15.2.0-5 gettext_0.23.2-1 gettext-base_0.23.2-1 gfortran_4:15.2.0-5 gfortran-15_15.2.0-15 gfortran-15-i686-linux-gnu_15.2.0-15 gfortran-i686-linux-gnu_4:15.2.0-5 gir1.2-freedesktop_1.86.0-6 gir1.2-freedesktop-dev_1.86.0-6 gir1.2-glib-2.0_2.87.2-3 gir1.2-glib-2.0-dev_2.87.2-3 gir1.2-harfbuzz-0.0_12.3.2-2+b2 gir1.2-pango-1.0_1.57.0-1 girepository-tools_2.87.2-3 glycin-loaders_2.0.8-1 glycin-thumbnailers_2.0.8-1 grep_3.12-1 groff-base_1.23.0-10 gtk-update-icon-cache_4.21.6+ds-1 gzip_1.13-1 hicolor-icon-theme_0.18-2 hostname_3.25 icu-devtools_78.2-2 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 java-common_0.77 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texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk [!arm !hppa !hurd-any] | openjdk-10-jdk [!arm !hppa !hurd-any], mpack, bash-completion, libtirpc-dev Package-List: r-base deb gnu-r optional arch=all r-base-core deb gnu-r optional arch=any r-base-dev deb gnu-r optional arch=all r-base-html deb doc optional arch=all r-doc-html deb doc optional arch=all r-doc-info deb doc optional arch=all r-doc-pdf deb doc optional arch=all r-mathlib deb gnu-r optional arch=any r-recommended deb gnu-r optional arch=all Checksums-Sha1: 9c3a32de28477647125f914cad564e77860b8a15 40518619 r-base_4.5.3.orig.tar.gz c92f1bcdc21a711e40d846ba366258f7d7d9efc5 101024 r-base_4.5.3-1.debian.tar.xz Checksums-Sha256: aa5c1ed4293c7271ac513d654670356ac0e8a6ad5e42be014365d11150b5b8f2 40518619 r-base_4.5.3.orig.tar.gz 388b174facc8fce08998e4c97ab522c377be94ba157a6fe326a3efa72cbb7718 101024 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inline signature for ./r-base_4.5.3-1.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./r-base_4.5.3-1.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting r-base in /build/reproducible-path/r-base-4.5.3 dpkg-source: info: unpacking r-base_4.5.3.orig.tar.gz dpkg-source: info: unpacking r-base_4.5.3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying set_R_LIBS_USER_and_SITE_in_Renviron.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1773229321 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-base dpkg-buildpackage: info: source version 4.5.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean *** clean *** dh_testdir dh_testroot rm -f configure-stamp \ build-stamp build-indep-stamp build-arch-stamp \ make-stamp make-arch-stamp make-indep-stamp \ install-indep-stamp install-arch-stamp \ check-stamp [ ! -f Makefile ] || /usr/bin/make distclean rm -f `find . -name "*~"` rm -rf debian/tmp debian/files debian/files* core debian/substvars debian/files rm -f doc/html/function.html doc/html/packages.html rm -f modules/*.so src/unix/Rscript dh_clean debian/rules binary-arch *** configure *** #automake #autoconf dh_testdir R_SHELL=/bin/bash \ mkdir_p="/bin/mkdir -p" \ MKDIR_P="/bin/mkdir -p" \ R_TEXI2DVICMD=emulation \ R_PAPERSIZE=letter \ R_BROWSER=xdg-open \ R_BZIPCMD=/bin/bzip2 \ R_GZIPCMD="/bin/gzip -n" \ PAGER=/usr/bin/pager \ PERL=/usr/bin/perl \ JAVA_HOME=/usr/lib/jvm/default-java \ R_UNZIPCMD=/usr/bin/unzip \ R_ZIPCMD=/usr/bin/zip \ R_PRINTCMD=/usr/bin/lpr \ TAR=/bin/tar \ LIBnn=lib \ AWK=/usr/bin/awk \ DD=/bin/dd \ GREP=/bin/grep \ FGREP="/bin/grep -F" \ EGREP="/bin/grep -E" \ SED=/bin/sed \ GETWD="/bin/pwd" \ CC=gcc \ CXX=g++ \ F77=gfortran \ FC=gfortran \ CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong" \ CPPFLAGS= \ LDFLAGS="-Wl,-z,relro" \ FLIBS= \ rsharedir=/usr/share/R/share \ rincludedir=/usr/share/R/include \ rdocdir=/usr/share/R/doc \ ./configure --prefix=/usr \ --with-cairo \ --with-jpeglib \ --with-readline \ --with-tcltk \ --mandir=/usr/share/man \ --infodir=/usr/share/info \ --datadir=/usr/share/R/share \ --includedir=/usr/share/R/include \ --with-blas \ --with-lapack \ --enable-long-double \ --enable-R-profiling \ --enable-R-shlib \ --enable-memory-profiling \ --without-recommended-packages \ --build i686-linux-gnu checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install 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gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/i686-linux-gnu/15 -L/usr/lib/gcc/i686-linux-gnu/15/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/15/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/15/../../.. -L/lib -L/usr/lib -lgfortran -lm -lquadmath checking how to get verbose linking output from gcc... -v checking for C libraries of gcc... -L/usr/lib/gcc/i686-linux-gnu/15 -L/usr/lib/gcc/i686-linux-gnu/15/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/15/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/15/../../.. -L/lib -L/usr/lib -lgcc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... yes checking whether gfortran 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searching for an external BLAS configure: searching for BLAS in default libraries checking for dgemm_... no configure: searching for OpenBLAS checking for sgemm_ in -lopenblas... no configure: searching for BLIS checking for sgemm_ in -lblis... no configure: searching for ATLAS checking for ATL_xerbla in -latlas... no configure: searching for PhiPACK checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no configure: searching for IBM ESSL checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no configure: searching for generic BLAS library checking for dgemm_ in -lblas... (cached) yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... yes checking for dpstrf_... no checking for dpstrf_ in -llapack... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for wchar.h... (cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... no checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.6/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.6/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... no checking for tirpc/rpc/types.h... yes checking for tirpc/rpc/xdr.h... yes checking for XDR library... -ltirpc checking for XDR support... yes checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for ZSTD_versionNumber in -lzstd... yes checking for zstd.h... yes checking if zstd version >= 1.3.3... yes checking for ZSTD_decompressBound... yes checking for libdeflate.h... yes checking for libdeflate_alloc_compressor in -ldeflate... yes yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for curl-config... /usr/bin/curl-config checking libcurl version ... 8.19.0-rc3 checking for curl/curl.h... yes checking if libcurl is >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for gcc option to enable large file support... -D_FILE_OFFSET_BITS=64 checking for declarations of fseeko and ftello... yes checking whether KERN_USRSTACK sysctl is supported... no checking for visible __lib_stack_end... yes checking for paperconf... /usr/bin/paperconf checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for ranlib... (cached) ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc... /usr/bin/i686-linux-gnu-ld checking if the linker (/usr/bin/i686-linux-gnu-ld) is GNU ld... yes checking for shared library run path origin... done checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) yes checking for munmap... yes checking for stpcpy... (cached) yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... yes checking for argz_stringify... yes checking for argz_next... yes checking for __fsetlocking... yes checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... yes checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... bison checking version of bison... 3.8.2, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/bash configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for i686-pc-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 Fortran fixed-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong Default C++ compiler: g++ -std=gnu++17 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 Fortran free-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(generic), LAPACK(generic), curl, libdeflate Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, libdeflate for lazyload Capabilities skipped: Options not enabled: shared BLAS Recommended packages: no configure: WARNING: 32-bit build -- this is little tested touch configure-stamp *** make-arch *** /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong" \ CC=gcc \ CXX=g++ \ F77=gfortran \ LDFLAGS="-Wl,-z,relro" \ PKG_BUILT_STAMP="""" \ R_GZIPCMD="/bin/gzip -n" \ R make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' creating src/scripts/R.fe make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' mkdir -p -- ../../bin make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' mkdir -p -- ../../include make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regexec.c -o regexec.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o ranlib libtre.a make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c uncmin.c -o uncmin.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dchdc.f -o dchdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dpbfa.f -o dpbfa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dpbsl.f -o dpbsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dpoco.f -o dpoco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dpodi.f -o dpodi.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dpofa.f -o dpofa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dposl.f -o dposl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dqrdc.f -o dqrdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dqrdc2.f -o dqrdc2.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dqrls.f -o dqrls.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dqrsl.f -o dqrsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dqrutl.f -o dqrutl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dsvdc.f -o dsvdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dtrco.f -o dtrco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ./sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.3"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c CommandLineArgs.c -o CommandLineArgs.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rdynload.c -o Rdynload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Renviron.c -o Renviron.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RNG.c -o RNG.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c agrep.c -o agrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c altclasses.c -o altclasses.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c altrep.c -o altrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c apply.c -o apply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arithmetic.c -o arithmetic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c array.c -o array.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c attrib.c -o attrib.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bind.c -o bind.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c builtin.c -o builtin.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c character.c -o character.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c coerce.c -o coerce.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c complex.c -o complex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c connections.c -o connections.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c context.c -o context.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cum.c -o cum.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dcf.c -o dcf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c datetime.c -o datetime.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c debug.c -o debug.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deparse.c -o deparse.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dotcode.c -o dotcode.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dounzip.c -o dounzip.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dstruct.c -o dstruct.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c duplicate.c -o duplicate.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c edit.c -o edit.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c engine.c -o engine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c envir.c -o envir.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c errors.c -o errors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c eval.c -o eval.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c flexiblas.c -o flexiblas.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c format.c -o format.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gevents.c -o gevents.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gram.c -o gram.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gram-ex.c -o gram-ex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c grep.c -o grep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c identical.c -o identical.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c inlined.c -o inlined.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c inspect.c -o inspect.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c internet.c -o internet.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c iosupport.c -o iosupport.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lapack.c -o lapack.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c list.c -o list.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c localecharset.c -o localecharset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c logic.c -o logic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c machine.c -o machine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o main.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mapply.c -o mapply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c match.c -o match.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c memory.c -o memory.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c names.c -o names.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c objects.c -o objects.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c options.c -o options.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c paste.c -o paste.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c platform.c -o platform.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plotmath.c -o plotmath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c print.c -o print.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printarray.c -o printarray.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printvector.c -o printvector.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printutils.c -o printutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qsort.c -o qsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c radixsort.c -o radixsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c raw.c -o raw.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c registration.c -o registration.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c relop.c -o relop.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlocale.c -o rlocale.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c saveload.c -o saveload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c scan.c -o scan.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c seq.c -o seq.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c serialize.c -o serialize.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sort.c -o sort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c source.c -o source.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c split.c -o split.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sprintf.c -o sprintf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c startup.c -o startup.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subassign.c -o subassign.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subscript.c -o subscript.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c summary.c -o summary.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sysutils.c -o sysutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c times.c -o times.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c unique.c -o unique.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c version.c -o version.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_alab_her.c -o g_alab_her.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_cntrlify.c -o g_cntrlify.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_fontdb.c -o g_fontdb.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_her_glyph.c -o g_her_glyph.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c xxxpr.f -o xxxpr.o gcc -shared -fopenmp -Wl,-z,relro -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.3/bin/exec mkdir -p -- /build/reproducible-path/r-base-4.5.3/lib make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -o R.bin Rmain.o -lR make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.3/modules make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' making Lapack.d from Lapack.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -o lapack.so Lapack.o flexiblas.o -lR -llapack -lblas -lgfortran -lm -lquadmath make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' gcc -I/usr/include/libpng16 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/cairo -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/cairo -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/cairo -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -lgobject-2.0 -lglib-2.0 -lcairo -lpng16 -lz -lXext -lX11 -lX11 -lXt -lR -lm gcc -I/usr/include/libpng16 -I/usr/include/i386-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/cairo -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -lgobject-2.0 -lglib-2.0 -lcairo -lpng16 -lz -lXext -lX11 -lX11 -lXt -lR -lm make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' mkdir -p -- ../../library make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' mkdir -p -- ../../../library/base/demo make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' mkdir -p -- ../../../library/tools/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c making Rsha256.d from Rsha256.c making sha256.d from sha256.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gramRd.c -o gramRd.o In file included from /usr/include/string.h:548, from ../../../include/Rinlinedfuns.h:81, from ../../../include/Defn.h:740, from gramRd.c:96: In function ‘memmove’, inlined from ‘mkIfdef’ at gramRd.c:4330:68, inlined from ‘token’ at gramRd.c:4034:70, inlined from ‘yylex’ at gramRd.c:4407:15, inlined from ‘Rf_yyparse’ at gramRd.c:2236:16: /usr/include/i386-linux-gnu/bits/string_fortified.h:36:10: warning: ‘__builtin_memmove’ specified bound between 2147483648 and 4294967295 exceeds maximum object size 2147483647 [-Wstringop-overflow=] 36 | return __builtin___memmove_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pdscan.c -o pdscan.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rsha256.c -o Rsha256.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sha256.c -o sha256.o gcc -shared -L../../../../lib -Wl,-z,relro -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o Rsha256.o sha256.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' byte-compiling package 'compiler' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' byte-compiling package 'base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' byte-compiling package 'tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' byte-compiling package 'utils' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[8]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[9]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/cairo -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/libpng16 -I../../../../../src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -lgobject-2.0 -lglib-2.0 -lcairo -lpng16 -lz -L"../../../../../lib" -lR -lm make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' byte-compiling package 'grDevices' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' byte-compiling package 'graphics' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats mkdir -p -- ../../../library/stats/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' mkdir -p -- ../../../library/stats/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c influence.c -o influence.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c loessf.f -o loessf.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c ppr.f -o ppr.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c sgram.f -o sgram.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c hclust.f -o hclust.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c kmns.f -o kmns.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c eureka.f -o eureka.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c stl.f -o stl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -msse2 -mfpmath=sse -c portsrc.f -o portsrc.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -c lminfl.f -o lminfl.o gcc -shared -L../../../../lib -Wl,-z,relro -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -lquadmath -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' byte-compiling package 'stats' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' mkdir -p -- ../../../library/methods/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' mkdir -p -- ../../../library/grid/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' byte-compiling package 'grid' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' mkdir -p -- ../../../library/splines/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -o splines.so splines.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' byte-compiling package 'splines' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' byte-compiling package 'stats4' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/i386-linux-gnu -ltcl8.6 -L/usr/lib/i386-linux-gnu -ltk8.6 -lX11 -lXss -lXext -lm -L../../../../lib -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' byte-compiling package 'tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' byte-compiling package 'parallel' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tests' you should 'make docs' now ... make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' (cd src/nmath/standalone; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ R_GZIPCMD="/bin/gzip -n" \ libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \ shared static ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' (cd ../../include; /usr/bin/make Rmath.h) make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' Copying source files make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' R_GZIPCMD="/bin/gzip -n" \ /usr/bin/make docs R_CMD_BUILD_HELP_OPTS="--txt --example" make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.3"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' /build/reproducible-path/r-base-4.5.3/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' /build/reproducible-path/r-base-4.5.3/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' /build/reproducible-path/r-base-4.5.3/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.3/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tests' you should 'make docs' now ... make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc' creating doc/NEWS creating doc/NEWS.pdf make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' installing parsed Rd make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' building/updating package metadata ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' writing package indices make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' /usr/bin/make javaconf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.3"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' /build/reproducible-path/r-base-4.5.3/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' /build/reproducible-path/r-base-4.5.3/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' /build/reproducible-path/r-base-4.5.3/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.3/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tests' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3' configuring Java ... Java interpreter : /usr/lib/jvm/default-java/bin/java Java version : 25.0.3-ea Java home path : /usr/lib/jvm/default-java Java compiler : /usr/lib/jvm/default-java/bin/javac Java headers gen.: Java archive tool: /usr/lib/jvm/default-java/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/zero -ljvm using C compiler: ‘gcc (Debian 15.2.0-15) 15.2.0’ make[3]: Entering directory '/tmp/Rjavareconf.ZzIxln' gcc -I"/build/reproducible-path/r-base-4.5.3/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c conftest.c -o conftest.o gcc -shared -L/build/reproducible-path/r-base-4.5.3/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/zero -ljvm -L/build/reproducible-path/r-base-4.5.3/lib -lR make[3]: Leaving directory '/tmp/Rjavareconf.ZzIxln' JAVA_HOME : /usr/lib/jvm/default-java Java library path: $(JAVA_HOME)/lib/zero JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/zero -ljvm Updating Java configuration in /build/reproducible-path/r-base-4.5.3 Done. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' touch make-arch-stamp *** install-arch *** dh_testdir dh_testroot dh_prep -a dh_installdirs -A /build/reproducible-path/r-base-4.5.3/debian/r-base-core /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.3/debian/r-base-core install make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc' installing doc ... mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/man/man1 make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/html' installing doc/html ... mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc/html make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' installing doc/manual ... mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc/manual mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc/manual/images make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/etc' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/etc installing etc ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/share' installing share ... mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/R mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/dictionaries mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/encodings mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/java mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/licenses mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/make mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/Rd mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/Rd/macros mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/sh mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/texmf mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/texmf/tex/latex make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/scripts' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/bin make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/blas' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/blas' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tre' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/tzone' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/tzone' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/xdr' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/xdr' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/extra/intl' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra/intl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/pkgconfig make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/bin/exec make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/lib make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/modules make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/library' mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/library installing packages ... building HTML index ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/tests' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/tests' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' (cd src/unix; \ rm -vf Rscript /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/Rscript; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3=. -fstack-protector-strong -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ RHOME=/usr/lib/R \ DESTDIR=/build/reproducible-path/r-base-4.5.3/debian/r-base-core \ install-Rscript ) removed 'Rscript' removed '/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/Rscript' make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.3/src/unix=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/unix' #ls -ltr /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/ #strings src/unix/Rscript cp -vax src/unix/Rscript /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/ 'src/unix/Rscript' -> '/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/Rscript' #ls -ltr /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/ #strings /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/bin/Rscript (cd src/nmath/standalone; \ /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.3/debian/r-base-core install ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/include' /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3/src/nmath/standalone' chmod a+x /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/share/sh/echo.sh rm -v /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/COPYING removed '/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/COPYING' (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/; \ ln -s ../../share/common-licenses/GPL-2 COPYING) rm -v /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc/COPYING removed '/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc/COPYING' (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc; \ ln -s ../../../share/common-licenses/GPL-2 COPYING) (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/texmf/tex/latex && \ ln -s ../../../R/share/texmf R) dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html dh_movefiles --sourcedir=debian/r-base-core -pr-base-html make prefix=/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr \ rdocdir=/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/R/doc \ install-pdf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ............................................ collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ................ collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'tcltk' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'compiler' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'parallel' ... Converting parsed Rd's to LaTeX . PDF/LaTeX documentation: full reference index ... This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2025-11-01> L3 programming layer <2026-01-19> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf-dist/fonts/enc/dvips /base/8r.enc}] No file fullrefman.toc. (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [1{/usr/share/texli ve/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2289--2289 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2643--2643 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2961--2965 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3447--3450 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4243--4245 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5591--5593 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6874--6874 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7801--7806 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8534--8538 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8649--8652 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8966--8977 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 2698) in paragraph at lines 9379--9385 []\T1/ptm/m/n/10 Further im-ple-mented meth-ods com-prise [][][]\T1/zi4/m/n/10 mean[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 summary[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unique[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is. finite[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 length<-[][][][]\T1/ptm/m/n /10 , Underfull \hbox (badness 1629) in paragraph at lines 9406--9418 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9406--9418 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] Underfull \hbox (badness 3657) in paragraph at lines 9606--9608 [][][]\T1/zi4/m/n/10 weekdays[][][][]\T1/ptm/m/n/10 , for con-ve-nience ex-trac -tion func-tions (also in-clud-ing []\T1/zi4/m/n/10 months()[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 quarters()[]\T1/ptm/m/n/10 , [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25101--25107 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25101--25107 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25941--25944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26148--26154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26538--26541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27166--27168 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27657--27665 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28087--28090 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28112--28114 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28253--28257 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28310--28315 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28622--28625 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28648--28650 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28694--28699 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28712--28715 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29127--29131 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29274--29277 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29355--29359 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29355--29359 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29360--29369 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30393--30396 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32205--32208 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32376--32387 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32928--32930 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34078--34080 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34081--34085 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34682--34684 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35889--35894 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36966--36970 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37057--37068 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38696--38698 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39114--39118 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39360--39364 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39365--39369 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39420--39427 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39655--39659 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41213--41221 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41223--41225 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] ignored error: Infinite glue shrinkage found in box being split [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41833--41839 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41851--41856 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41974--41979 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42521--42524 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42733. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43472--43476 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44666--44669 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45582--45590 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45582--45590 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 47023--47026 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47156--47160 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47282--47284 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47368--47373 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47616--47618 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 48018--48022 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48079--48083 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] ignored error: Infinite glue shrinkage found in box being split [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3776--3776 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} ignored error: Infinite glue shrinkage found in box being split [914] ignored error: Infinite glue shrinkage found in box being split [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4755--4760 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5254--5260 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5444--5446 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6119 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] ignored error: Infinite glue shrinkage found in box being split [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10440--10443 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10518--10522 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1791--1791 [] \T1/zi4/m/n/9 if(is.null(xout)) { rx <- range(x, na.rm=TRUE); xout <- seq( rx[1], rx[2], length.out = 25) }[] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] [1497] Underfull \hbox (badness 2503) in paragraph at lines 3585--3588 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3698. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 3989) in paragraph at lines 4844--4851 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2556) in paragraph at lines 5498--5501 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1528] [1529] [1530] [1531] [1532] [1533] [1534] Underfull \hbox (badness 2503) in paragraph at lines 5910--5914 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] Underfull \hbox (badness 7081) in paragraph at lines 6709--6712 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6713--6715 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1548] [1549] [1550] [1551] [1552] [1553] Underfull \vbox (badness 10000) has occurred while \output is active [1554] [1555] [1556] Underfull \vbox (badness 10000) has occurred while \output is active [1557] [1558] [1559] [1560] [1561] Underfull \hbox (badness 10000) in paragraph at lines 7609--7612 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1562] [1563] [1564] [1565] [1566] [1567] Underfull \vbox (badness 3803) has occurred while \output is active [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] Underfull \hbox (badness 1960) in paragraph at lines 8486--8489 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1577] [1578] [1579] [1580] [1581] [1582] [1583] Underfull \vbox (badness 3803) has occurred while \output is active [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 2626) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1590] Underfull \hbox (badness 2503) in paragraph at lines 9416--9420 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 4518) in paragraph at lines 10764--10769 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 2142) in paragraph at lines 11132--11135 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11151--11154 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1617] Underfull \hbox (badness 1708) in paragraph at lines 11213--11217 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1618] [1619] [1620] Underfull \hbox (badness 1005) in paragraph at lines 11432--11436 []\T1/ptm/m/n/10 Method []\T1/zi4/m/sl/10 "centroid" []\T1/ptm/m/n/10 has been rec-om-mended to be used with \T1/ptm/m/it/10 squared \T1/ptm/m/n/10 Eu-clidean dis-tances [1621] [1622] [1623] Underfull \hbox (badness 1694) in paragraph at lines 11613--11616 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12111 \aliasA{hat}{influence.measures}{hat} [1632] [1633] Underfull \hbox (badness 1484) in paragraph at lines 12256--12258 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 10000) in paragraph at lines 12843--12845 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 2894) in paragraph at lines 13185--13189 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1650] [1651] [1652] [1653] [1654] [1655] Underfull \hbox (badness 1496) in paragraph at lines 13613--13619 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1656] [1657] [1658] [1659] [1660] [1661] [1662] Underfull \hbox (badness 4518) in paragraph at lines 14016--14021 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] Underfull \hbox (badness 1596) in paragraph at lines 14650--14653 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1672] Underfull \hbox (badness 4518) in paragraph at lines 14708--14713 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1673] [1674] [1675] Underfull \hbox (badness 6412) in paragraph at lines 14848--14852 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14855--14857 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] Underfull \hbox (badness 2503) in paragraph at lines 15932--15936 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \hbox (badness 10000) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] Underfull \hbox (badness 1158) in paragraph at lines 18107--18110 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] Underfull \vbox (badness 10000) has occurred while \output is active [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] [1745] Underfull \hbox (badness 1377) in paragraph at lines 19152--19157 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19157--19160 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19170--19174 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19170--19174 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19178--19182 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1746] [1747] [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19403--19403 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19406--19406 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] Underfull \hbox (badness 1337) in paragraph at lines 19905--19908 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] [1766] Underfull \hbox (badness 10000) in paragraph at lines 20374--20380 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1767] [1768] [1769] [1770] [1771] [1772] [1773] Underfull \hbox (badness 1194) in paragraph at lines 20801--20804 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1774] [1775] [1776] [1777] [1778] [1779] Underfull \hbox (badness 2503) in paragraph at lines 21179--21182 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21206--21208 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] Underfull \hbox (badness 10000) in paragraph at lines 22289--22295 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] [1821] [1822] Underfull \hbox (badness 1337) in paragraph at lines 23765--23771 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] Underfull \hbox (badness 1436) in paragraph at lines 24257--24260 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24260--24263 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1831] [1832] Underfull \hbox (badness 10000) in paragraph at lines 24412--24413 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] [1847] [1848] Underfull \hbox (badness 1824) in paragraph at lines 25384--25390 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25384--25390 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25405--25408 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] [1858] Underfull \hbox (badness 2165) in paragraph at lines 25980--25985 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1859] [1860] [1861] Underfull \hbox (badness 1867) in paragraph at lines 26190--26192 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26206--26210 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] [1886] [1887] Underfull \vbox (badness 10000) has occurred while \output is active [1888] Underfull \hbox (badness 3514) in paragraph at lines 27858--27863 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1889] [1890] [1891] [1892] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28092--28092 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1893] Underfull \hbox (badness 3514) in paragraph at lines 28128--28134 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1894] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28188--28188 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1895] [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28361--28366 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] [1899] Underfull \hbox (badness 3514) in paragraph at lines 28448--28453 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1900] Underfull \hbox (badness 3514) in paragraph at lines 28513--28518 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] [1902] Underfull \hbox (badness 3514) in paragraph at lines 28607--28612 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1903] Underfull \hbox (badness 6691) in paragraph at lines 28699--28704 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1904] [1905] [1906] [1907] [1908] [1909] [1910] [1911] Underfull \hbox (badness 4024) in paragraph at lines 29186--29189 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] [1920] [1921] Underfull \hbox (badness 5431) in paragraph at lines 29796--29798 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1922] [1923] [1924] [1925] Underfull \hbox (badness 5431) in paragraph at lines 30006--30009 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1926] [1927] [1928] [1929] [1930] Underfull \hbox (badness 1337) in paragraph at lines 30321--30325 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1931] [1932] [1933] Underfull \hbox (badness 1127) in paragraph at lines 30463--30466 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1934] [1935] [1936] Underfull \hbox (badness 1616) in paragraph at lines 30670--30673 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] [1955] [1956] Underfull \hbox (badness 3557) in paragraph at lines 31902--31906 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1957] [1958] [1959] Underfull \vbox (badness 10000) has occurred while \output is active [1960] [1961] [1962] Underfull \hbox (badness 1337) in paragraph at lines 32269--32273 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] Underfull \hbox (badness 1337) in paragraph at lines 32797--32801 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1972] [1973] [1974] Overfull \hbox (0.71648pt too wide) in paragraph at lines 33005--33005 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1975] [1976] [1977] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33166--33166 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1978] [1979] [1980] [1981] [1982]) (./stats4-pkg.tex Chapter 11. [1983] [1984] [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] [1988] [1989] [1990] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1991] [1992] [1993]) (./tcltk-pkg.tex [1994] Chapter 12. [1995] [1996] [1997] [1998] [1999] [2000] [2001] Underfull \vbox (badness 10000) has occurred while \output is active [2002] Underfull \vbox (badness 10000) has occurred while \output is active [2003] Underfull \hbox (badness 1546) in paragraph at lines 683--690 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2004] [2005] [2006] [2007] [2008] Underfull \vbox (badness 10000) has occurred while \output is active [2009] [2010] [2011] [2012] [2013] [2014] [2015] [2016]) (./tools-pkg.tex Chapter 13. [2017] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2018] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2019] [2020] [2021] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2022] [2023] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2024] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2025] [2026] [2027] [2028] [2029] [2030] [2031] ignored error: Infinite glue shrinkage found in box being split [2032] [2033] [2034] [2035] [2036] [2037] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2038] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2039] [2040] [2041] [2042] [2043] [2044] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2045] [2046] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2047] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2048] [2049] [2050] [2051] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2052] [2053] [2054] [2055] [2056] [2057] [2058] [2059] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2060] [2061] [2062] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] [2077] [2078] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2091] [2092] [2093] [2094] [2095] [2096] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4921--4921 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2097] [2098] [2099] Underfull \hbox (badness 1796) in paragraph at lines 5130--5135 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2100] Underfull \hbox (badness 1838) in paragraph at lines 5216--5222 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5216--5222 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2101] [2102] [2103] [2104] [2105] [2106] Underfull \hbox (badness 2197) in paragraph at lines 5568--5578 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2107] Underfull \hbox (badness 1571) in paragraph at lines 5634--5638 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2108] [2109] [2110] [2111]) (./utils-pkg.tex [2112] Chapter 14. [2113] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2124] [2125] [2126] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2127] [2128] [2129] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2130] [2131] [2132] Underfull \vbox (badness 3803) has occurred while \output is active [2133] [2134] [2135] [2136] [2137] [2138] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2150] [2151] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2152] [2153] [2154] [2155] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2177] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2178] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2179] [2180] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2202] [2203] [2204] [2205] [2206] [2207] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2216] [2217] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2218] [2219] [2220] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2221] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2222] [2223] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2224] [2225] Underfull \hbox (badness 1325) in paragraph at lines 7251--7255 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2226] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2227] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2228] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2229] Underfull \hbox (badness 1024) in paragraph at lines 7555--7558 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7588--7593 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2230] Underfull \hbox (badness 5133) in paragraph at lines 7654--7658 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] Underfull \hbox (badness 10000) in paragraph at lines 8321--8323 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] [2254] Underfull \hbox (badness 2310) in paragraph at lines 9108--9113 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] Underfull \hbox (badness 1248) in paragraph at lines 9686--9690 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2264] Underfull \hbox (badness 1789) in paragraph at lines 9764--9766 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2265] [2266] [2267] [2268] Underfull \hbox (badness 2600) in paragraph at lines 9988--9991 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] Underfull \hbox (badness 1097) in paragraph at lines 10625--10628 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2278] [2279] Underfull \hbox (badness 3000) in paragraph at lines 10761--10766 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] Underfull \hbox (badness 2134) in paragraph at lines 11356--11361 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2289] Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] Underfull \hbox (badness 1824) in paragraph at lines 11910--11914 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.knitr} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.restore} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.setup} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.ncols} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.mathjaxr} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi st, replaced by a fixed one 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Output written on tctt0900.600gf (128 characters, 17564 bytes). Transcript written on tctt0900.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk: successfully generated. Output written on fullrefman.pdf (2373 pages, 5540526 bytes). Transcript written on fullrefman.log. This is makeindex, version 2.17 [TeX Live 2025] (kpathsea + Thai support). Scanning input file fullrefman.idx...................done (15308 entries accepted, 41 rejected). Sorting entries.................................................................................................................................................................done (235607 comparisons). Generating output file fullrefman.ind..................done (15303 lines written, 49 warnings). Output written in fullrefman.ind. Transcript written in fullrefman.ilg. 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2289--2289 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2643--2643 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2961--2965 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3447--3450 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4243--4245 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5591--5593 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6874--6874 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7801--7806 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8534--8538 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8649--8652 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8966--8977 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 2698) in paragraph at lines 9379--9385 []\T1/ptm/m/n/10 Further im-ple-mented meth-ods com-prise [][][]\T1/zi4/m/n/10 mean[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 summary[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unique[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is. finite[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 length<-[][][][]\T1/ptm/m/n /10 , Underfull \hbox (badness 1629) in paragraph at lines 9406--9418 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9406--9418 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] Underfull \hbox (badness 3657) in paragraph at lines 9606--9608 [][][]\T1/zi4/m/n/10 weekdays[][][][]\T1/ptm/m/n/10 , for con-ve-nience ex-trac -tion func-tions (also in-clud-ing []\T1/zi4/m/n/10 months()[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 quarters()[]\T1/ptm/m/n/10 , [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25101--25107 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25101--25107 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25941--25944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26148--26154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26538--26541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27166--27168 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27657--27665 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28087--28090 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28112--28114 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28253--28257 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28310--28315 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28622--28625 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28648--28650 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28694--28699 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28712--28715 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29127--29131 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29274--29277 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29355--29359 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29355--29359 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29360--29369 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30393--30396 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32205--32208 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32376--32387 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32928--32930 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34078--34080 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34081--34085 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34682--34684 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35889--35894 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36966--36970 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37057--37068 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38696--38698 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39114--39118 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39360--39364 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39365--39369 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39420--39427 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39655--39659 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41213--41221 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41223--41225 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] ignored error: Infinite glue shrinkage found in box being split [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41833--41839 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41851--41856 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41974--41979 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42521--42524 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42733. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43472--43476 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44666--44669 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45582--45590 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45582--45590 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 47023--47026 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47156--47160 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47282--47284 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47368--47373 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47616--47618 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 48018--48022 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48079--48083 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] ignored error: Infinite glue shrinkage found in box being split [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3776--3776 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} ignored error: Infinite glue shrinkage found in box being split [914] ignored error: Infinite glue shrinkage found in box being split [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4755--4760 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5254--5260 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5444--5446 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6119 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] ignored error: Infinite glue shrinkage found in box being split [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10440--10443 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10518--10522 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1791--1791 [] \T1/zi4/m/n/9 if(is.null(xout)) { rx <- range(x, na.rm=TRUE); xout <- seq( rx[1], rx[2], length.out = 25) }[] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] [1497] Underfull \hbox (badness 2503) in paragraph at lines 3585--3588 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3698. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 3989) in paragraph at lines 4844--4851 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2556) in paragraph at lines 5498--5501 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1528] [1529] [1530] [1531] [1532] [1533] [1534] Underfull \hbox (badness 2503) in paragraph at lines 5910--5914 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] Underfull \hbox (badness 7081) in paragraph at lines 6709--6712 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6713--6715 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1548] [1549] [1550] [1551] [1552] [1553] Underfull \vbox (badness 10000) has occurred while \output is active [1554] [1555] [1556] Underfull \vbox (badness 10000) has occurred while \output is active [1557] [1558] [1559] [1560] [1561] Underfull \hbox (badness 10000) in paragraph at lines 7609--7612 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1562] [1563] [1564] [1565] [1566] [1567] Underfull \vbox (badness 3803) has occurred while \output is active [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] Underfull \hbox (badness 1960) in paragraph at lines 8486--8489 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1577] [1578] [1579] [1580] [1581] [1582] [1583] Underfull \vbox (badness 3803) has occurred while \output is active [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 2626) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1590] Underfull \hbox (badness 2503) in paragraph at lines 9416--9420 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 4518) in paragraph at lines 10764--10769 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 2142) in paragraph at lines 11132--11135 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11151--11154 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1617] Underfull \hbox (badness 1708) in paragraph at lines 11213--11217 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1618] [1619] [1620] Underfull \hbox (badness 1005) in paragraph at lines 11432--11436 []\T1/ptm/m/n/10 Method []\T1/zi4/m/sl/10 "centroid" []\T1/ptm/m/n/10 has been rec-om-mended to be used with \T1/ptm/m/it/10 squared \T1/ptm/m/n/10 Eu-clidean dis-tances [1621] [1622] [1623] Underfull \hbox (badness 1694) in paragraph at lines 11613--11616 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12111 \aliasA{hat}{influence.measures}{hat} [1632] [1633] Underfull \hbox (badness 1484) in paragraph at lines 12256--12258 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 10000) in paragraph at lines 12843--12845 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 2894) in paragraph at lines 13185--13189 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1650] [1651] [1652] [1653] [1654] [1655] Underfull \hbox (badness 1496) in paragraph at lines 13613--13619 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1656] [1657] [1658] [1659] [1660] [1661] [1662] Underfull \hbox (badness 4518) in paragraph at lines 14016--14021 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] Underfull \hbox (badness 1596) in paragraph at lines 14650--14653 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1672] Underfull \hbox (badness 4518) in paragraph at lines 14708--14713 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1673] [1674] [1675] Underfull \hbox (badness 6412) in paragraph at lines 14848--14852 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14855--14857 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] Underfull \hbox (badness 2503) in paragraph at lines 15932--15936 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \hbox (badness 10000) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] Underfull \hbox (badness 1158) in paragraph at lines 18107--18110 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] Underfull \vbox (badness 10000) has occurred while \output is active [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] [1745] Underfull \hbox (badness 1377) in paragraph at lines 19152--19157 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19157--19160 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19170--19174 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19170--19174 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19178--19182 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1746] [1747] [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19403--19403 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19406--19406 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] Underfull \hbox (badness 1337) in paragraph at lines 19905--19908 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] [1766] Underfull \hbox (badness 10000) in paragraph at lines 20374--20380 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1767] [1768] [1769] [1770] [1771] [1772] [1773] Underfull \hbox (badness 1194) in paragraph at lines 20801--20804 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1774] [1775] [1776] [1777] [1778] [1779] Underfull \hbox (badness 2503) in paragraph at lines 21179--21182 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21206--21208 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] Underfull \hbox (badness 10000) in paragraph at lines 22289--22295 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] [1821] [1822] Underfull \hbox (badness 1337) in paragraph at lines 23765--23771 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] Underfull \hbox (badness 1436) in paragraph at lines 24257--24260 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24260--24263 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1831] [1832] Underfull \hbox (badness 10000) in paragraph at lines 24412--24413 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] [1847] [1848] Underfull \hbox (badness 1824) in paragraph at lines 25384--25390 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25384--25390 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25405--25408 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] [1858] Underfull \hbox (badness 2165) in paragraph at lines 25980--25985 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1859] [1860] [1861] Underfull \hbox (badness 1867) in paragraph at lines 26190--26192 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26206--26210 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] [1886] [1887] Underfull \vbox (badness 10000) has occurred while \output is active [1888] Underfull \hbox (badness 3514) in paragraph at lines 27858--27863 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1889] [1890] [1891] [1892] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28092--28092 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1893] Underfull \hbox (badness 3514) in paragraph at lines 28128--28134 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1894] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28188--28188 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1895] [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28361--28366 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] [1899] Underfull \hbox (badness 3514) in paragraph at lines 28448--28453 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1900] Underfull \hbox (badness 3514) in paragraph at lines 28513--28518 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] [1902] Underfull \hbox (badness 3514) in paragraph at lines 28607--28612 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1903] Underfull \hbox (badness 6691) in paragraph at lines 28699--28704 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1904] [1905] [1906] [1907] [1908] [1909] [1910] [1911] Underfull \hbox (badness 4024) in paragraph at lines 29186--29189 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] [1920] [1921] Underfull \hbox (badness 5431) in paragraph at lines 29796--29798 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1922] [1923] [1924] [1925] Underfull \hbox (badness 5431) in paragraph at lines 30006--30009 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1926] [1927] [1928] [1929] [1930] Underfull \hbox (badness 1337) in paragraph at lines 30321--30325 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1931] [1932] [1933] Underfull \hbox (badness 1127) in paragraph at lines 30463--30466 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1934] [1935] [1936] Underfull \hbox (badness 1616) in paragraph at lines 30670--30673 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] [1955] [1956] Underfull \hbox (badness 3557) in paragraph at lines 31902--31906 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1957] [1958] [1959] Underfull \vbox (badness 10000) has occurred while \output is active [1960] [1961] [1962] Underfull \hbox (badness 1337) in paragraph at lines 32269--32273 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] Underfull \hbox (badness 1337) in paragraph at lines 32797--32801 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1972] [1973] [1974] Overfull \hbox (0.71648pt too wide) in paragraph at lines 33005--33005 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1975] [1976] [1977] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33166--33166 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1978] [1979] [1980] [1981] [1982]) (./stats4-pkg.tex Chapter 11. [1983] [1984] [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] [1988] [1989] [1990] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1991] [1992] [1993]) (./tcltk-pkg.tex [1994] Chapter 12. [1995] [1996] [1997] [1998] [1999] [2000] [2001] Underfull \vbox (badness 10000) has occurred while \output is active [2002] Underfull \vbox (badness 10000) has occurred while \output is active [2003] Underfull \hbox (badness 1546) in paragraph at lines 683--690 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2004] [2005] [2006] [2007] [2008] Underfull \vbox (badness 10000) has occurred while \output is active [2009] [2010] [2011] [2012] [2013] [2014] [2015] [2016]) (./tools-pkg.tex Chapter 13. [2017] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2018] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2019] [2020] [2021] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2022] [2023] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2024] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2025] [2026] [2027] [2028] [2029] [2030] [2031] ignored error: Infinite glue shrinkage found in box being split [2032] [2033] [2034] [2035] [2036] [2037] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2038] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2039] [2040] [2041] [2042] [2043] [2044] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2045] [2046] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2047] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2048] [2049] [2050] [2051] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2052] [2053] [2054] [2055] [2056] [2057] [2058] [2059] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2060] [2061] [2062] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] [2077] [2078] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2091] [2092] [2093] [2094] [2095] [2096] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4921--4921 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2097] [2098] [2099] Underfull \hbox (badness 1796) in paragraph at lines 5130--5135 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2100] Underfull \hbox (badness 1838) in paragraph at lines 5216--5222 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. 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[2113] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2124] [2125] [2126] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2127] [2128] [2129] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2130] [2131] [2132] Underfull \vbox (badness 3803) has occurred while \output is active [2133] [2134] [2135] [2136] [2137] [2138] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2150] [2151] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2152] [2153] [2154] [2155] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2177] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2178] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2179] [2180] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2202] [2203] [2204] [2205] [2206] [2207] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2216] [2217] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2218] [2219] [2220] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2221] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2222] [2223] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2224] [2225] Underfull \hbox (badness 1325) in paragraph at lines 7251--7255 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2226] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2227] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2228] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2229] Underfull \hbox (badness 1024) in paragraph at lines 7555--7558 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7588--7593 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2230] Underfull \hbox (badness 5133) in paragraph at lines 7654--7658 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] Underfull \hbox (badness 10000) in paragraph at lines 8321--8323 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] [2254] Underfull \hbox (badness 2310) in paragraph at lines 9108--9113 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] Underfull \hbox (badness 1248) in paragraph at lines 9686--9690 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2264] Underfull \hbox (badness 1789) in paragraph at lines 9764--9766 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2265] [2266] [2267] [2268] Underfull \hbox (badness 2600) in paragraph at lines 9988--9991 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] Underfull \hbox (badness 1097) in paragraph at lines 10625--10628 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2278] [2279] Underfull \hbox (badness 3000) in paragraph at lines 10761--10766 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] Underfull \hbox (badness 2134) in paragraph at lines 11356--11361 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2289] Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] Underfull \hbox (badness 1824) in paragraph at lines 11910--11914 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2298] [2299] [2300] [2301] [2302] [2303] [2304] Underfull \hbox (badness 4060) in paragraph at lines 12356--12359 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12379--12379 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2305] [2306] [2307] [2308] Underfull \hbox (badness 2150) in paragraph at lines 12634--12636 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2309] [2310] [2311] [2312] Underfull \hbox (badness 10000) in paragraph at lines 12854--12858 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12887--12893 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2313] Underfull \hbox (badness 2762) in paragraph at lines 12902--12908 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2289--2289 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2643--2643 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2961--2965 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3447--3450 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4243--4245 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5591--5593 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6874--6874 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7485--7490 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7801--7806 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8534--8538 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8649--8652 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8966--8977 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 2698) in paragraph at lines 9379--9385 []\T1/ptm/m/n/10 Further im-ple-mented meth-ods com-prise [][][]\T1/zi4/m/n/10 mean[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 summary[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unique[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is. finite[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 length<-[][][][]\T1/ptm/m/n /10 , Underfull \hbox (badness 1629) in paragraph at lines 9406--9418 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9406--9418 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] Underfull \hbox (badness 3657) in paragraph at lines 9606--9608 [][][]\T1/zi4/m/n/10 weekdays[][][][]\T1/ptm/m/n/10 , for con-ve-nience ex-trac -tion func-tions (also in-clud-ing []\T1/zi4/m/n/10 months()[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 quarters()[]\T1/ptm/m/n/10 , [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25101--25107 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25101--25107 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25613--25616 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25941--25944 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26148--26154 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26538--26541 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27166--27168 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27657--27665 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28087--28090 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28112--28114 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28253--28257 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28310--28315 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28609--28615 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28622--28625 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28648--28650 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28694--28699 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28700--28711 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28712--28715 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29127--29131 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29274--29277 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29355--29359 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29355--29359 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29360--29369 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30393--30396 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32087--32094 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32205--32208 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32376--32387 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32928--32930 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34057--34061 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34078--34080 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34081--34085 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34682--34684 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35889--35894 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36966--36970 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37057--37068 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38696--38698 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39114--39118 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39360--39364 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39365--39369 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39405--39411 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39420--39427 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39420--39427 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39655--39659 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41213--41221 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41223--41225 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] ignored error: Infinite glue shrinkage found in box being split [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41833--41839 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41851--41856 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41974--41979 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42521--42524 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42733. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43472--43476 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44666--44669 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45582--45590 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45582--45590 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 47023--47026 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47156--47160 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47282--47284 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47368--47373 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47616--47618 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 48018--48022 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48079--48083 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] ignored error: Infinite glue shrinkage found in box being split [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3776--3776 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} ignored error: Infinite glue shrinkage found in box being split [914] ignored error: Infinite glue shrinkage found in box being split [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4755--4760 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5254--5260 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5444--5446 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6119 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] ignored error: Infinite glue shrinkage found in box being split [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10440--10443 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10518--10522 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1791--1791 [] \T1/zi4/m/n/9 if(is.null(xout)) { rx <- range(x, na.rm=TRUE); xout <- seq( rx[1], rx[2], length.out = 25) }[] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] [1497] Underfull \hbox (badness 2503) in paragraph at lines 3585--3588 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3698. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 3989) in paragraph at lines 4844--4851 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] Underfull \hbox (badness 2556) in paragraph at lines 5498--5501 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1528] [1529] [1530] [1531] [1532] [1533] [1534] Underfull \hbox (badness 2503) in paragraph at lines 5910--5914 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] Underfull \hbox (badness 7081) in paragraph at lines 6709--6712 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6713--6715 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1548] [1549] [1550] [1551] [1552] [1553] Underfull \vbox (badness 10000) has occurred while \output is active [1554] [1555] [1556] Underfull \vbox (badness 10000) has occurred while \output is active [1557] [1558] [1559] [1560] [1561] Underfull \hbox (badness 10000) in paragraph at lines 7609--7612 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1562] [1563] [1564] [1565] [1566] [1567] Underfull \vbox (badness 3803) has occurred while \output is active [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] Underfull \hbox (badness 1960) in paragraph at lines 8486--8489 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1577] [1578] [1579] [1580] [1581] [1582] [1583] Underfull \vbox (badness 3803) has occurred while \output is active [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 2626) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1590] Underfull \hbox (badness 2503) in paragraph at lines 9416--9420 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 4518) in paragraph at lines 10764--10769 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 2142) in paragraph at lines 11132--11135 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11151--11154 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1617] Underfull \hbox (badness 1708) in paragraph at lines 11213--11217 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1618] [1619] [1620] Underfull \hbox (badness 1005) in paragraph at lines 11432--11436 []\T1/ptm/m/n/10 Method []\T1/zi4/m/sl/10 "centroid" []\T1/ptm/m/n/10 has been rec-om-mended to be used with \T1/ptm/m/it/10 squared \T1/ptm/m/n/10 Eu-clidean dis-tances [1621] [1622] [1623] Underfull \hbox (badness 1694) in paragraph at lines 11613--11616 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12111 \aliasA{hat}{influence.measures}{hat} [1632] [1633] Underfull \hbox (badness 1484) in paragraph at lines 12256--12258 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 10000) in paragraph at lines 12843--12845 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1644] [1645] [1646] [1647] [1648] [1649] Underfull \hbox (badness 2894) in paragraph at lines 13185--13189 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1650] [1651] [1652] [1653] [1654] [1655] Underfull \hbox (badness 1496) in paragraph at lines 13613--13619 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1656] [1657] [1658] [1659] [1660] [1661] [1662] Underfull \hbox (badness 4518) in paragraph at lines 14016--14021 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] Underfull \hbox (badness 1596) in paragraph at lines 14650--14653 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1672] Underfull \hbox (badness 4518) in paragraph at lines 14708--14713 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1673] [1674] [1675] Underfull \hbox (badness 6412) in paragraph at lines 14848--14852 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14855--14857 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] Underfull \hbox (badness 2503) in paragraph at lines 15932--15936 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] Underfull \hbox (badness 10000) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16445--16451 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] Underfull \hbox (badness 1158) in paragraph at lines 18107--18110 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] Underfull \vbox (badness 10000) has occurred while \output is active [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] [1745] Underfull \hbox (badness 1377) in paragraph at lines 19152--19157 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19157--19160 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19170--19174 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19170--19174 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19178--19182 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1746] [1747] [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19403--19403 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19406--19406 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] Underfull \hbox (badness 1337) in paragraph at lines 19905--19908 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] [1766] Underfull \hbox (badness 10000) in paragraph at lines 20374--20380 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1767] [1768] [1769] [1770] [1771] [1772] [1773] Underfull \hbox (badness 1194) in paragraph at lines 20801--20804 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1774] [1775] [1776] [1777] [1778] [1779] Underfull \hbox (badness 2503) in paragraph at lines 21179--21182 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21206--21208 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] Underfull \hbox (badness 10000) in paragraph at lines 22289--22295 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] [1821] [1822] Underfull \hbox (badness 1337) in paragraph at lines 23765--23771 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] Underfull \hbox (badness 1436) in paragraph at lines 24257--24260 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24260--24263 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1831] [1832] Underfull \hbox (badness 10000) in paragraph at lines 24412--24413 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] [1847] [1848] Underfull \hbox (badness 1824) in paragraph at lines 25384--25390 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25384--25390 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25405--25408 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] [1858] Underfull \hbox (badness 2165) in paragraph at lines 25980--25985 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1859] [1860] [1861] Underfull \hbox (badness 1867) in paragraph at lines 26190--26192 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26206--26210 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] [1886] [1887] Underfull \vbox (badness 10000) has occurred while \output is active [1888] Underfull \hbox (badness 3514) in paragraph at lines 27858--27863 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1889] [1890] [1891] [1892] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28092--28092 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1893] Underfull \hbox (badness 3514) in paragraph at lines 28128--28134 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1894] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28188--28188 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1895] [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28361--28366 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] [1899] Underfull \hbox (badness 3514) in paragraph at lines 28448--28453 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1900] Underfull \hbox (badness 3514) in paragraph at lines 28513--28518 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] [1902] Underfull \hbox (badness 3514) in paragraph at lines 28607--28612 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1903] Underfull \hbox (badness 6691) in paragraph at lines 28699--28704 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1904] [1905] [1906] [1907] [1908] [1909] [1910] [1911] Underfull \hbox (badness 4024) in paragraph at lines 29186--29189 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] [1920] [1921] Underfull \hbox (badness 5431) in paragraph at lines 29796--29798 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1922] [1923] [1924] [1925] Underfull \hbox (badness 5431) in paragraph at lines 30006--30009 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1926] [1927] [1928] [1929] [1930] Underfull \hbox (badness 1337) in paragraph at lines 30321--30325 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1931] [1932] [1933] Underfull \hbox (badness 1127) in paragraph at lines 30463--30466 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1934] [1935] [1936] Underfull \hbox (badness 1616) in paragraph at lines 30670--30673 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] [1955] [1956] Underfull \hbox (badness 3557) in paragraph at lines 31902--31906 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1957] [1958] [1959] Underfull \vbox (badness 10000) has occurred while \output is active [1960] [1961] [1962] Underfull \hbox (badness 1337) in paragraph at lines 32269--32273 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] Underfull \hbox (badness 1337) in paragraph at lines 32797--32801 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1972] [1973] [1974] Overfull \hbox (0.71648pt too wide) in paragraph at lines 33005--33005 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1975] [1976] [1977] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33166--33166 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1978] [1979] [1980] [1981] [1982]) (./stats4-pkg.tex Chapter 11. [1983] [1984] [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] [1988] [1989] [1990] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1991] [1992] [1993]) (./tcltk-pkg.tex [1994] Chapter 12. [1995] [1996] [1997] [1998] [1999] [2000] [2001] Underfull \vbox (badness 10000) has occurred while \output is active [2002] Underfull \vbox (badness 10000) has occurred while \output is active [2003] Underfull \hbox (badness 1546) in paragraph at lines 683--690 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2004] [2005] [2006] [2007] [2008] Underfull \vbox (badness 10000) has occurred while \output is active [2009] [2010] [2011] [2012] [2013] [2014] [2015] [2016]) (./tools-pkg.tex Chapter 13. [2017] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2018] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2019] [2020] [2021] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2022] [2023] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2024] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2025] [2026] [2027] [2028] [2029] [2030] [2031] ignored error: Infinite glue shrinkage found in box being split [2032] [2033] [2034] [2035] [2036] [2037] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2038] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2039] [2040] [2041] [2042] [2043] [2044] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2045] [2046] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2047] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2048] [2049] [2050] [2051] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2052] [2053] [2054] [2055] [2056] [2057] [2058] [2059] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2060] [2061] [2062] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] [2077] [2078] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2091] [2092] [2093] [2094] [2095] [2096] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4921--4921 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2097] [2098] [2099] Underfull \hbox (badness 1796) in paragraph at lines 5130--5135 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2100] Underfull \hbox (badness 1838) in paragraph at lines 5216--5222 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5216--5222 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2101] [2102] [2103] [2104] [2105] [2106] Underfull \hbox (badness 2197) in paragraph at lines 5568--5578 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2107] Underfull \hbox (badness 1571) in paragraph at lines 5634--5638 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2108] [2109] [2110] [2111]) (./utils-pkg.tex [2112] Chapter 14. [2113] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2124] [2125] [2126] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2127] [2128] [2129] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2130] [2131] [2132] Underfull \vbox (badness 3803) has occurred while \output is active [2133] [2134] [2135] [2136] [2137] [2138] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2150] [2151] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2152] [2153] [2154] [2155] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2177] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2178] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2179] [2180] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2202] [2203] [2204] [2205] [2206] [2207] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2216] [2217] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2218] [2219] [2220] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2221] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2222] [2223] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2224] [2225] Underfull \hbox (badness 1325) in paragraph at lines 7251--7255 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2226] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2227] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2228] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2229] Underfull \hbox (badness 1024) in paragraph at lines 7555--7558 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7588--7593 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2230] Underfull \hbox (badness 5133) in paragraph at lines 7654--7658 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] Underfull \hbox (badness 10000) in paragraph at lines 8321--8323 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] [2254] Underfull \hbox (badness 2310) in paragraph at lines 9108--9113 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] Underfull \hbox (badness 1248) in paragraph at lines 9686--9690 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2264] Underfull \hbox (badness 1789) in paragraph at lines 9764--9766 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2265] [2266] [2267] [2268] Underfull \hbox (badness 2600) in paragraph at lines 9988--9991 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] Underfull \hbox (badness 1097) in paragraph at lines 10625--10628 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2278] [2279] Underfull \hbox (badness 3000) in paragraph at lines 10761--10766 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] Underfull \hbox (badness 2134) in paragraph at lines 11356--11361 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2289] Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11412--11417 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] Underfull \hbox (badness 1824) in paragraph at lines 11910--11914 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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one Output written on fullrefman.pdf (2488 pages, 6240314 bytes). Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-FAQ.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] [-1] Chapter 1 Chapter 2 [1] Cross reference values unknown; you must run TeX again. [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 342946 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) [1{/var/lib/texm f/fonts/map/pdftex/updmap/pdftex.map}] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-FAQ.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-FAQ.aux) Chapter 2 [1] [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 361933 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-admin.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1874--1874 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2098--2106 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2171--2171 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2623--2623 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3201--3201 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3424--3426 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3521--3521 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4162--4165 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4891--4891 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5085--5085 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5176--5176 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5304--5304 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] [70] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5311--5311 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5341--5341 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5350--5351 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5615--5615 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5652 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5728--5739 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5888--5888 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5893--5893 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5911--5911 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5934--5934 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] No file R-admin.vrs. (Environment variable index) [81] No file R-admin.ens. (Concept index) [82] No file R-admin.cps. [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (86 pages, 453470 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1874--1874 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2098--2106 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2171--2171 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2623--2623 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3201--3201 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3424--3426 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3521--3521 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4162--4165 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4891--4891 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5085--5085 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5176--5176 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] l.5230: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5230: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5230: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5304--5304 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5311--5311 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] [70] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5341--5341 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5350--5351 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5615--5615 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5652 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5728--5739 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5888--5888 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5893--5893 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5911--5911 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5934--5934 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.vrs) (Environment variable index) [81] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.ens) (Concept index) [82] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-admin.cps) [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (88 pages, 497004 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-data.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) [1] Chapter 1 [2] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1200--1212 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1758--1764 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] No file R-data.vrs. (Concept index) [34] No file R-data.cps. [35] ) (see the transcript file for additional information) Output written on R-data.pdf (38 pages, 259948 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1200--1212 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1758--1764 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 296030 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1200--1212 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1758--1764 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 296030 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-exts.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1645--1652 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2056--2056 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2280--2280 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2687--2687 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2689--2689 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2828--2828 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3033--3036 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX20) $(CXX20STD)" CXXFLAGS="$(CXX20FLAGS) $(CXX 20PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3352--3352 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4720--4720 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4949--4949 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4968--4968 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5427--5427 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 2 3 24 25[] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5443--5443 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5445--5445 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5446--5446 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] [71] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5461--5461 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5870--5870 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 6037--6040 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] [80] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6123--6123 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6268--6268 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6333--6333 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6410--6410 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6422--6422 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] [84] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6437--6437 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap Underfull \hbox (badness 10000) in paragraph at lines 6490--6491 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6981--6981 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] [93] Chapter 2 [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 8235--8242 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 8451--8456 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [111] [112] [113] Chapter 3 [114] [115] [116] [117] [118] [119] [120] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9205--9205 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [121] Chapter 4 [122] [123] [124] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9473--9473 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [125] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9514--9514 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [126] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9619--9619 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9649--9658 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [127] [128] [129] [130] Underfull \hbox (badness 10000) in paragraph at lines 9910--9915 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9908--9921 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9925--9926 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [131] [132] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10074--10074 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10100--10103 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10113--10116 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [133] [134] Underfull \hbox (badness 10000) in paragraph at lines 10212--10216 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10228--10228 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10229--10229 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10232--10232 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10240--10240 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10284--10288 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [135] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10307--10307 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10352--10352 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10355--10355 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [136] [137] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10434--10434 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [138] [139] [140] Underfull \hbox (badness 10000) in paragraph at lines 10669--10671 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [141] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10725--10725 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10744--10744 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10755--10755 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10775--10775 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10784--10784 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10785--10785 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [142] Chapter 5 [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11587--11587 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11651--11651 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [154] [155] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11817--11817 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [156] [157] [158] [159] [160] [161] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12257--12257 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [162] [163] [164] [165] [166] [167] [168] [169] [170] Writing index file R-exts.ae [171] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13150--13150 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [173] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13219--13219 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [174] [175] Underfull \hbox (badness 7576) in paragraph at lines 13450--13458 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [176] [177] [178] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13730--13730 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [179] [180] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13898--13898 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13926--13926 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [181] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14038--14038 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [183] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14162--14162 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14169--14169 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14170--14170 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14224--14224 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14237--14237 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14238--14238 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [186] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14338--14338 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [187] [188] [189] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14513--14513 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [190] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14605--14605 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [191] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14742--14742 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [192] [193] Chapter 6 [194] [195] [196] [197] Writing index file R-exts.for [198] [199] [200] [201] [202] [203] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15744--15744 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] Underfull \hbox (badness 10000) in paragraph at lines 16573--16577 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [214] [215] [216] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16801--16801 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16808--16808 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16837--16837 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Chapter 7 [228] [229] Chapter 8 [230] [231] Writing index file R-exts.em [232] Overfull \hbox (43.6852pt too wide) in paragraph at lines 18034--18034 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [233] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18077--18077 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18092--18092 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [234] [235] [236] [237] [238] [239] [240] [241] [242] (Function and variable index) [243] No file R-exts.vrs. (API index) [244] No file R-exts.aps. (Fortran API index) [245] No file R-exts.fors. (Experimental API index) [246] No file R-exts.aes. (Embedding API index) [247] No file R-exts.ems. (Concept index) [248] No file R-exts.cps. [249] ) (see the transcript file for additional information) Output written on R-exts.pdf (252 pages, 966581 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1645--1652 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2056--2056 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2280--2280 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2687--2687 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2689--2689 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2828--2828 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3033--3036 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX20) $(CXX20STD)" CXXFLAGS="$(CXX20FLAGS) $(CXX 20PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3352--3352 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4720--4720 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4949--4949 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4968--4968 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5427--5427 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 2 3 24 25[] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5443--5443 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5445--5445 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5446--5446 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] [71] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5461--5461 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5870--5870 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 6037--6040 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] [80] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6123--6123 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6268--6268 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6333--6333 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6410--6410 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6422--6422 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] [84] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6437--6437 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap Underfull \hbox (badness 10000) in paragraph at lines 6490--6491 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6981--6981 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] [93] Chapter 2 [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 8235--8242 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 8451--8456 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [111] [112] [113] Chapter 3 [114] [115] [116] [117] [118] [119] [120] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9205--9205 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [121] Chapter 4 [122] [123] [124] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9473--9473 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [125] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9514--9514 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [126] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9619--9619 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9649--9658 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [127] [128] [129] [130] Underfull \hbox (badness 10000) in paragraph at lines 9910--9915 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9908--9921 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9925--9926 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [131] [132] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10074--10074 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10100--10103 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10113--10116 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [133] [134] Underfull \hbox (badness 10000) in paragraph at lines 10212--10216 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10228--10228 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10229--10229 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10232--10232 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10240--10240 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10284--10288 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [135] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10307--10307 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10352--10352 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10355--10355 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [136] [137] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10434--10434 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [138] [139] [140] Underfull \hbox (badness 10000) in paragraph at lines 10669--10671 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [141] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10725--10725 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10744--10744 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10755--10755 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10775--10775 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10784--10784 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10785--10785 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [142] Chapter 5 [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11587--11587 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11651--11651 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [154] [155] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11817--11817 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [156] [157] [158] [159] [160] [161] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12257--12257 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [162] [163] [164] [165] [166] [167] [168] [169] [170] Writing index file R-exts.ae [171] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13150--13150 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [173] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13219--13219 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [174] [175] Underfull \hbox (badness 7576) in paragraph at lines 13450--13458 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [176] [177] [178] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13730--13730 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [179] [180] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13898--13898 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13926--13926 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [181] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14038--14038 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [183] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14162--14162 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14169--14169 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14170--14170 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14224--14224 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14237--14237 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14238--14238 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [186] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14338--14338 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [187] [188] [189] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14513--14513 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [190] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14605--14605 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [191] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14742--14742 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [192] [193] Chapter 6 [194] [195] [196] [197] Writing index file R-exts.for [198] [199] [200] [201] [202] [203] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15744--15744 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] Underfull \hbox (badness 10000) in paragraph at lines 16573--16577 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [214] [215] [216] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16801--16801 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16808--16808 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16837--16837 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Chapter 7 [228] [229] Chapter 8 [230] [231] Writing index file R-exts.em [232] Overfull \hbox (43.6852pt too wide) in paragraph at lines 18034--18034 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [233] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18077--18077 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18092--18092 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [234] [235] [236] [237] [238] [239] [240] [241] [242] (Function and variable index) [243] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.vrs [244] [245] [246] [247] [248] [249]) (API index) [250] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aps [251] [252] [253]) (Fortran API index) [254] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.fors) (Experimental API index) [255] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aes [256]) (Embedding API index) [257] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.ems) (Concept index) [258] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.cps [259]) [260] ) (see the transcript file for additional information) Output written on R-exts.pdf (268 pages, 1067525 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1645--1652 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2056--2056 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2280--2280 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2687--2687 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2689--2689 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2828--2828 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3033--3036 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX20) $(CXX20STD)" CXXFLAGS="$(CXX20FLAGS) $(CXX 20PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3352--3352 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4720--4720 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4949--4949 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4968--4968 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5427--5427 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 2 3 24 25[] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5443--5443 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5445--5445 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5446--5446 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] [71] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5461--5461 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5870--5870 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 6037--6040 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] [80] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6123--6123 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6268--6268 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6333--6333 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6410--6410 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6422--6422 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] [84] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6437--6437 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap Underfull \hbox (badness 10000) in paragraph at lines 6490--6491 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6981--6981 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] [93] Chapter 2 [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 8235--8242 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 8451--8456 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [111] [112] [113] Chapter 3 [114] [115] [116] [117] [118] [119] [120] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9205--9205 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [121] Chapter 4 [122] [123] [124] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9473--9473 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [125] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9514--9514 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [126] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9619--9619 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9649--9658 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [127] [128] [129] [130] Underfull \hbox (badness 10000) in paragraph at lines 9910--9915 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9908--9921 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9925--9926 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [131] [132] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10074--10074 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10100--10103 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10113--10116 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [133] [134] Underfull \hbox (badness 10000) in paragraph at lines 10212--10216 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10228--10228 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10229--10229 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10232--10232 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10240--10240 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10284--10288 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [135] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10307--10307 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10352--10352 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10355--10355 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [136] [137] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10434--10434 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [138] [139] [140] Underfull \hbox (badness 10000) in paragraph at lines 10669--10671 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [141] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10725--10725 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10744--10744 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10755--10755 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10775--10775 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10784--10784 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10785--10785 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [142] Chapter 5 [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11587--11587 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11651--11651 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [154] [155] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11817--11817 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [156] [157] [158] [159] [160] [161] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12257--12257 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [162] [163] [164] [165] [166] [167] [168] [169] [170] Writing index file R-exts.ae [171] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13150--13150 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [173] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13219--13219 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [174] [175] Underfull \hbox (badness 7576) in paragraph at lines 13450--13458 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [176] [177] [178] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13730--13730 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [179] [180] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13898--13898 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13926--13926 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [181] [182] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14038--14038 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [183] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14162--14162 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14169--14169 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14170--14170 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14224--14224 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14237--14237 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14238--14238 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [186] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14338--14338 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [187] [188] [189] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14513--14513 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [190] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14605--14605 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [191] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14742--14742 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [192] [193] Chapter 6 [194] [195] [196] [197] Writing index file R-exts.for [198] [199] [200] [201] [202] [203] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15744--15744 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] Underfull \hbox (badness 10000) in paragraph at lines 16573--16577 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [214] [215] [216] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16801--16801 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16808--16808 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16837--16837 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Chapter 7 [228] [229] Chapter 8 [230] [231] Writing index file R-exts.em [232] Overfull \hbox (43.6852pt too wide) in paragraph at lines 18034--18034 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [233] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18077--18077 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18092--18092 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [234] [235] [236] [237] [238] [239] [240] [241] [242] (Function and variable index) [243] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.vrs [244] [245] [246] [247] [248] [249]) (API index) [250] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aps [251] [252] [253]) (Fortran API index) [254] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.fors) (Experimental API index) [255] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.aes [256]) (Embedding API index) [257] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.ems) (Concept index) [258] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-exts.cps [259]) [260] ) (see the transcript file for additional information) Output written on R-exts.pdf (268 pages, 1067495 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-intro.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4725--4727 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5602--5602 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6297--6302 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6492--6497 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] No file R-intro.vrs. (Concept index) [103] No file R-intro.cps. [104] ) (see the transcript file for additional information) Output written on R-intro.pdf (107 pages, 553095 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4725--4727 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5602--5602 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6297--6302 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6492--6497 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 605659 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4725--4727 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5602--5602 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6297--6302 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6492--6497 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 605679 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-ints.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3042--3048 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3698--3705 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] Chapter 13 [72] [73] (Function and variable index) [74] [75] No file R-ints.vrs. (Concept index) [76] No file R-ints.cps. [77] ) (see the transcript file for additional information) Output written on R-ints.pdf (80 pages, 403239 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3042--3048 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3698--3705 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] Chapter 13 [72] [73] (Function and variable index) [74] [75] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.vrs [76] [77]) (Concept index) [78] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.cps) [79] ) (see the transcript file for additional information) Output written on R-ints.pdf (84 pages, 451306 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3042--3048 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3698--3705 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] Chapter 13 [72] [73] (Function and variable index) [74] [75] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.vrs [76] [77]) (Concept index) [78] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-ints.cps) [79] ) (see the transcript file for additional information) Output written on R-ints.pdf (84 pages, 451306 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-lang.texi This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] No file R-lang.vrs. (Concept index) [61] No file R-lang.cps. [62] ) (see the transcript file for additional information) Output written on R-lang.pdf (65 pages, 336912 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 379941 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2024-11-04.20]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.3/doc/manual/R-defs.texi) (/build/reproducible-path/r-base-4.5.3/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.3/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 379941 bytes). Transcript written on R-lang.log. installing R manuals in PDF format ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' make prefix=/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr \ infodir=/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info install-info make[1]: Entering directory '/build/reproducible-path/r-base-4.5.3' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.3/doc/manual' /usr/bin/texi2any --enable-encoding -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -I. R-admin.texi /usr/bin/texi2any --enable-encoding -I. R-data.texi /usr/bin/texi2any --enable-encoding -I. R-exts.texi /usr/bin/texi2any --enable-encoding -I. R-intro.texi /usr/bin/texi2any --enable-encoding -I. R-ints.texi /usr/bin/texi2any --enable-encoding -I. R-lang.texi mkdir -p -- /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info /usr/bin/install -c -m 644 "./dir" "/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info" installing R info pages ... updating '/build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir' ... you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/dir manually make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.3/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.3' dh_movefiles --sourcedir=debian/r-base-core -pr-doc-pdf dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html gunzip -9v /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/*.gz /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-FAQ.info.gz: 67.5% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-FAQ.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-admin.info.gz: 68.1% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-admin.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-data.info.gz: 70.8% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-data.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-1.gz: 66.9% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-1 /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-2.gz: 67.9% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-2 /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-3.gz: 80.1% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info-3 /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info.gz: 70.1% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-exts.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-intro.info.gz: 70.4% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-intro.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-ints.info.gz: 68.8% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-ints.info /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-lang.info.gz: 72.0% -- replaced with /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/info/R-lang.info dh_movefiles --sourcedir=debian/r-base-core -pr-doc-info rm -vf /build/reproducible-path/r-base-4.5.3/debian/r-doc-info/usr/share/info/dir \ /build/reproducible-path/r-base-4.5.3/debian/r-doc-info/usr/share/info/dir.old removed '/build/reproducible-path/r-base-4.5.3/debian/r-doc-info/usr/share/info/dir' touch install-indep-stamp dh_installdirs -pr-mathlib usr/include usr/lib \ usr/share/lintian/overrides \ usr/lib/pkgconfig dh_movefiles --sourcedir=debian/r-base-core -pr-mathlib (cd /build/reproducible-path/r-base-4.5.3/debian/r-mathlib/usr/lib; \ ls -l ; \ mv -v libRmath.so libRmath.so.1.0.0; \ ln -sv libRmath.so.1.0.0 libRmath.so.1; \ ln -sv libRmath.so.1 libRmath.so) total 1724 -rw-r--r-- 1 sbuild sbuild 1097040 Mar 11 16:35 libRmath.a -rwxr-xr-x 1 sbuild sbuild 660580 Mar 11 16:35 libRmath.so drwxr-xr-x 2 sbuild sbuild 4096 Mar 11 16:36 pkgconfig renamed 'libRmath.so' -> 'libRmath.so.1.0.0' 'libRmath.so.1' -> 'libRmath.so.1.0.0' 'libRmath.so' -> 'libRmath.so.1' install -m 0644 src/include/Rmath.h \ /build/reproducible-path/r-base-4.5.3/debian/r-mathlib/usr/include install -m 0644 debian/Rprofile.site /build/reproducible-path/r-base-4.5.3/debian/r-base-core/etc/R install -m 0644 debian/Renviron.site /build/reproducible-path/r-base-4.5.3/debian/r-base-core/etc/R (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/etc; \ mv Makeconf repositories ldpaths ../../../../etc/R/; \ mv Renviron Renviron.ucf; \ ln -s /etc/R/Makeconf .; \ ln -s /etc/R/Renviron .; \ ln -s /etc/R/Renviron.site .; \ ln -s /etc/R/Rprofile.site .; \ ln -s /etc/R/ldpaths .; \ ln -s /etc/R/repositories . ) dh_bash-completion # edd 12 Jan 2016 new location #install -m 0644 debian/R.bash-completion \ # debian/r-base-core/usr/share/bash-completion/completions/R (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/; \ ln -sv R/lib/libR.so . ) './libR.so' -> 'R/lib/libR.so' (cd debian/icon-class-patch && munpack rlogo_icon.png.mpack) rlogo_icon.png (application/octet-stream) install -m 0644 debian/icon-class-patch/rlogo_icon.png \ debian/r-base-core/usr/share/icons/hicolor/48x48/apps install -m 0644 debian/icon-class-patch/Rlogo.svg \ debian/r-base-core/usr/share/icons/hicolor/scalable/apps/rlogo_icon.svg install -m 0644 debian/icon-class-patch/R.desktop \ debian/r-base-core/usr/share/applications rm debian/icon-class-patch/rlogo_icon.png touch install-arch-stamp *** binary-arch *** dh_testdir -a dh_testroot -a dh_installdocs -pr-base-core doc/NEWS.* README \ debian/README.Atlas \ debian/README.mathlib dh_installdocs -pr-mathlib doc/NEWS.* README \ debian/README.mathlib dh_installexamples -pr-mathlib src/nmath/standalone/test.c (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .) (cd /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .) install -p -m 0644 debian/r-base-core.lintian \ /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/share/lintian/overrides/r-base-core install -p -m 0644 debian/r-recommended.lintian \ /build/reproducible-path/r-base-4.5.3/debian/r-recommended/usr/share/lintian/overrides/r-recommended install -p -m 0644 debian/r-mathlib.lintian \ /build/reproducible-path/r-base-4.5.3/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib dh_installchangelogs -a -k doc/NEWS dh_strip -a dh_compress -a dh_fixperms -a dh_link -a dh_makeshlibs -a dh_installdeb -a dh_perl -a dh_shlibdeps -a -l /build/reproducible-path/r-base-4.5.3/debian/r-base-core/usr/lib/R/lib dpkg-shlibdeps: warning: cannot extract name and version from library name 'libR.so' dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot extract name and version from library name 'libtcl8.6.so' dpkg-shlibdeps: warning: cannot extract name and version from library name 'libtk8.6.so' *** Getting graphics engine version from 'GraphicsEngine.h' header echo R_GE_version | cpp -I ./src/include/ -include R_ext/GraphicsEngine.h | tail -n1 | sed 's/^/graphicsengine:Version=/' >> debian/r-base-core.substvars dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'r-mathlib' in '../r-mathlib_4.5.3-1_i386.deb'. dpkg-deb: building package 'r-base-core-dbgsym' in '../r-base-core-dbgsym_4.5.3-1_i386.deb'. dpkg-deb: building package 'r-base-core' in '../r-base-core_4.5.3-1_i386.deb'. dpkg-deb: building package 'r-mathlib-dbgsym' in '../r-mathlib-dbgsym_4.5.3-1_i386.deb'. dpkg-genbuildinfo --build=any -O../r-base_4.5.3-1_i386.buildinfo dpkg-genchanges --build=any -O../r-base_4.5.3-1_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-03-11T16:37:14Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Wed, 11 Mar 2026 16:37:15 +0000 | +------------------------------------------------------------------------------+ r-base_4.5.3-1_i386.changes: ---------------------------- Format: 1.8 Date: Wed, 11 Mar 2026 06:42:01 -0500 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: i386 Version: 4.5.3-1 Distribution: unstable Urgency: medium Maintainer: Dirk Eddelbuettel Changed-By: Dirk Eddelbuettel Description: r-base-core - GNU R core of statistical computation and graphics system r-mathlib - GNU R standalone mathematics library Changes: r-base (4.5.3-1) unstable; urgency=medium . * New upstream release . * debian/control: Set Standards-Version: to current version * debian/watch: Update to version 4 * debian/control: Removed '!kfreebsd-any' from depends for jdk packages Checksums-Sha1: 65c902f16769a4e0e5f9b12513ecc4f82e446ecc 6007928 r-base-core-dbgsym_4.5.3-1_i386.deb 5c9eabebd25293c859ff29fbaf3a95bef798bed6 28677476 r-base-core_4.5.3-1_i386.deb 7a69587313695a1df11f7bc34f57c3aee34e5fcb 17461 r-base_4.5.3-1_i386.buildinfo 4a8c1f12110a946489be58ca48f2178528751cd9 187048 r-mathlib-dbgsym_4.5.3-1_i386.deb 47c2712c4dcadabb48e094c86a3e03510cc20be8 2718852 r-mathlib_4.5.3-1_i386.deb Checksums-Sha256: 535d51e79010fc028dbe8c8269945459c99cc66fc6aaf20ebcf462bf2553c767 6007928 r-base-core-dbgsym_4.5.3-1_i386.deb d492885c30021a75a811978b6143ba894ac3e36aefc96cd87d2863f57361fd65 28677476 r-base-core_4.5.3-1_i386.deb c9d46c80d1b00ebbd83fa5e8cd9a03e56c57dccd9c2dc7c3b26dd0eab15ba5f5 17461 r-base_4.5.3-1_i386.buildinfo 3a09faeff3ba1e7bbce0898400d639c86e7fe532b0d108b309caedd7bf08c10a 187048 r-mathlib-dbgsym_4.5.3-1_i386.deb 2875dd49a55fc82d078e217dd3acff8e190b7c6d6003cef1b35a01df13a150f6 2718852 r-mathlib_4.5.3-1_i386.deb Files: 182f12545b056e6b361af6b26f57d344 6007928 debug optional r-base-core-dbgsym_4.5.3-1_i386.deb bfb49bccc298ffa7c4e7598efe23b4ff 28677476 gnu-r optional r-base-core_4.5.3-1_i386.deb 8b673583f353f4c2de1449d5916787d2 17461 gnu-r optional r-base_4.5.3-1_i386.buildinfo 1e8770eb09c0e248b59fffd78e5fabd6 187048 debug optional r-mathlib-dbgsym_4.5.3-1_i386.deb 8c464f95416fec324d7823bf269d0307 2718852 gnu-r optional r-mathlib_4.5.3-1_i386.deb +------------------------------------------------------------------------------+ | Buildinfo Wed, 11 Mar 2026 16:37:16 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: i386 Version: 4.5.3-1 Checksums-Md5: 182f12545b056e6b361af6b26f57d344 6007928 r-base-core-dbgsym_4.5.3-1_i386.deb bfb49bccc298ffa7c4e7598efe23b4ff 28677476 r-base-core_4.5.3-1_i386.deb 1e8770eb09c0e248b59fffd78e5fabd6 187048 r-mathlib-dbgsym_4.5.3-1_i386.deb 8c464f95416fec324d7823bf269d0307 2718852 r-mathlib_4.5.3-1_i386.deb Checksums-Sha1: 65c902f16769a4e0e5f9b12513ecc4f82e446ecc 6007928 r-base-core-dbgsym_4.5.3-1_i386.deb 5c9eabebd25293c859ff29fbaf3a95bef798bed6 28677476 r-base-core_4.5.3-1_i386.deb 4a8c1f12110a946489be58ca48f2178528751cd9 187048 r-mathlib-dbgsym_4.5.3-1_i386.deb 47c2712c4dcadabb48e094c86a3e03510cc20be8 2718852 r-mathlib_4.5.3-1_i386.deb Checksums-Sha256: 535d51e79010fc028dbe8c8269945459c99cc66fc6aaf20ebcf462bf2553c767 6007928 r-base-core-dbgsym_4.5.3-1_i386.deb d492885c30021a75a811978b6143ba894ac3e36aefc96cd87d2863f57361fd65 28677476 r-base-core_4.5.3-1_i386.deb 3a09faeff3ba1e7bbce0898400d639c86e7fe532b0d108b309caedd7bf08c10a 187048 r-mathlib-dbgsym_4.5.3-1_i386.deb 2875dd49a55fc82d078e217dd3acff8e190b7c6d6003cef1b35a01df13a150f6 2718852 r-mathlib_4.5.3-1_i386.deb Build-Origin: Debian Build-Architecture: i386 Build-Date: Wed, 11 Mar 2026 16:37:14 +0000 Build-Path: /build/reproducible-path/r-base-4.5.3 Installed-Build-Depends: adwaita-icon-theme (= 50~alpha-1), at-spi2-common (= 2.59.1-2), autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-2), bash-completion (= 1:2.16.0-8), binutils (= 2.46-3), binutils-common (= 2.46-3), binutils-i686-linux-gnu (= 2.46-3), bison (= 2:3.8.2+dfsg-1+b3), bsdextrautils (= 2.41.3-4), bubblewrap (= 0.11.0-2), build-essential (= 12.12), bzip2 (= 1.0.8-6+b1), ca-certificates (= 20260223), ca-certificates-java (= 20240118), comerr-dev (= 2.1-1.47.4-1), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-15 (= 15.2.0-15), cpp-15-i686-linux-gnu (= 15.2.0-15), cpp-i686-linux-gnu (= 4:15.2.0-5), dash (= 0.5.12-12), dbus (= 1.16.2-4), dbus-bin (= 1.16.2-4), dbus-daemon (= 1.16.2-4), dbus-session-bus-common (= 1.16.2-4), dbus-system-bus-common (= 1.16.2-4), dbus-user-session (= 1.16.2-4), dconf-gsettings-backend (= 0.49.0-4), dconf-service (= 0.49.0-4), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2), default-jdk (= 2:1.25-77), default-jdk-headless (= 2:1.25-77), default-jre (= 2:1.25-77), default-jre-headless (= 2:1.25-77), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-2), file (= 1:5.46-5+b1), findutils (= 4.10.0-3), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-15), g++-15-i686-linux-gnu (= 15.2.0-15), g++-i686-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-15 (= 15.2.0-15), gcc-15-base (= 15.2.0-15), gcc-15-i686-linux-gnu (= 15.2.0-15), gcc-16-base (= 16-20260308-1), gcc-i686-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), gfortran (= 4:15.2.0-5), gfortran-15 (= 15.2.0-15), gfortran-15-i686-linux-gnu (= 15.2.0-15), gfortran-i686-linux-gnu (= 4:15.2.0-5), gir1.2-freedesktop (= 1.86.0-6), gir1.2-freedesktop-dev (= 1.86.0-6), gir1.2-glib-2.0 (= 2.87.2-3), gir1.2-glib-2.0-dev (= 2.87.2-3), gir1.2-harfbuzz-0.0 (= 12.3.2-2+b2), gir1.2-pango-1.0 (= 1.57.0-1), girepository-tools (= 2.87.2-3), glycin-loaders (= 2.0.8-1), glycin-thumbnailers (= 2.0.8-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gtk-update-icon-cache (= 4.21.6+ds-1), gzip (= 1.13-1), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), icu-devtools (= 78.2-2), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), java-common (= 0.77), krb5-multidev (= 1.22.1-2), libacl1 (= 2.3.2-3), libapache-pom-java (= 33-2), libapparmor1 (= 4.1.6-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 16-20260308-1), libasound2-data (= 1.2.15.3-1), libasound2t64 (= 1.2.15.3-1), libatk-bridge2.0-0t64 (= 2.59.1-2), libatk1.0-0t64 (= 2.59.1-2), libatomic1 (= 16-20260308-1), libatspi2.0-0t64 (= 2.59.1-2), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libavahi-client3 (= 0.8-18), libavahi-common-data (= 0.8-18), libavahi-common3 (= 0.8-18), libbinutils (= 2.46-3), libblas-dev (= 3.12.1-7+b1), libblas3 (= 3.12.1-7+b1), libblkid-dev (= 2.41.3-4), libblkid1 (= 2.41.3-4), libbrotli-dev (= 1.2.0-3), libbrotli1 (= 1.2.0-3), libbsd0 (= 0.12.2-2+b1), libbz2-1.0 (= 1.0.8-6+b1), libbz2-dev (= 1.0.8-6+b1), libc-bin (= 2.42-13), libc-dev-bin (= 2.42-13), libc-gconv-modules-extra (= 2.42-13), libc6 (= 2.42-13), libc6-dev (= 2.42-13), libcairo-gobject2 (= 1.18.4-3), libcairo-script-interpreter2 (= 1.18.4-3), libcairo2 (= 1.18.4-3), libcairo2-dev (= 1.18.4-3), libcap-ng0 (= 0.9.1-1), libcap2 (= 1:2.75-10+b9), libcc1-0 (= 16-20260308-1), libcloudproviders0 (= 0.4.0-2), libcolord2 (= 1.4.8-3), libcom-err2 (= 1.47.4-1), libcommons-logging-java (= 1.3.0-2), libcommons-parent-java (= 56-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.46-3), libctf0 (= 2.46-3), libcups2t64 (= 2.4.16-1), libcurl4-openssl-dev (= 8.19.0~rc3-1), libcurl4t64 (= 8.19.0~rc3-1), libdatrie-dev (= 0.2.14-1), libdatrie1 (= 0.2.14-1), libdav1d7 (= 1.5.3-1+b1), libdb5.3t64 (= 5.3.28+dfsg2-11), libdbus-1-3 (= 1.16.2-4), libdconf1 (= 0.49.0-4), libde265-0 (= 1.0.16-1+b1), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.31), libdeflate-dev (= 1.23-2+b1), libdeflate0 (= 1.23-2+b1), libdpkg-perl (= 1.23.7), libdrm-amdgpu1 (= 2.4.131-1), libdrm-common (= 2.4.131-1), libdrm-intel1 (= 2.4.131-1), libdrm2 (= 2.4.131-1), libedit2 (= 3.1-20251016-1), libelf1t64 (= 0.194-1), libepoxy0 (= 1.5.10-2+b1), libevent-2.1-7t64 (= 2.1.12-stable-10+b2), libexpat1 (= 2.7.4-1), libexpat1-dev (= 2.7.4-1), libffi-dev (= 3.5.2-3+b1), libffi8 (= 3.5.2-3+b1), libfile-homedir-perl (= 1.006-2), libfile-stripnondeterminism-perl (= 1.15.0-1), libfile-which-perl (= 1.27-2), libfontbox-java (= 1:1.8.16-5), libfontconfig-dev (= 2.17.1-5), libfontconfig1 (= 2.17.1-5), libfontenc1 (= 1:1.1.8-1+b3), libfreetype-dev (= 2.14.2+dfsg-1), libfreetype6 (= 2.14.2+dfsg-1), libfribidi-dev (= 1.0.16-5), libfribidi0 (= 1.0.16-5), libgbm1 (= 26.0.1-2), libgcc-15-dev (= 15.2.0-15), libgcc-s1 (= 16-20260308-1), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libgdk-pixbuf-2.0-0 (= 2.44.5+dfsg-4), libgdk-pixbuf2.0-common (= 2.44.5+dfsg-4), libgfortran-15-dev (= 15.2.0-15), libgfortran5 (= 16-20260308-1), libgif7 (= 5.2.2-1+b2), libgio-2.0-dev (= 2.87.2-3), libgio-2.0-dev-bin (= 2.87.2-3), libgirepository-2.0-0 (= 2.87.2-3), libgl1 (= 1.7.0-3), libgl1-mesa-dri (= 26.0.1-2), libglib2.0-0t64 (= 2.87.2-3), libglib2.0-bin (= 2.87.2-3), libglib2.0-data (= 2.87.2-3), libglib2.0-dev (= 2.87.2-3), libglib2.0-dev-bin (= 2.87.2-3), libglvnd0 (= 1.7.0-3), libglx-mesa0 (= 26.0.1-2), libglx0 (= 1.7.0-3), libglycin-2-0 (= 2.0.8-1), libgmp-dev (= 2:6.3.0+dfsg-5+b1), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b1), libgnutls-dane0t64 (= 3.8.12-3), libgnutls28-dev (= 3.8.12-3), libgnutls30t64 (= 3.8.12-3), libgomp1 (= 16-20260308-1), libgprofng0 (= 2.46-3), libgraphite2-3 (= 1.3.14-11+b1), libgraphite2-dev (= 1.3.14-11+b1), libgssapi-krb5-2 (= 1.22.1-2), libgssrpc4t64 (= 1.22.1-2), libgtk-3-0t64 (= 3.24.51-4), libgtk-3-common (= 3.24.51-4), libharfbuzz-cairo0 (= 12.3.2-2+b2), libharfbuzz-dev (= 12.3.2-2+b2), libharfbuzz-gobject0 (= 12.3.2-2+b2), libharfbuzz-icu0 (= 12.3.2-2+b2), libharfbuzz-subset0 (= 12.3.2-2+b2), libharfbuzz0b (= 12.3.2-2+b2), libheif-plugin-dav1d (= 1.21.2-3), libheif-plugin-libde265 (= 1.21.2-3), libheif1 (= 1.21.2-3), libhogweed6t64 (= 3.10.2-1), libhwy1t64 (= 1.3.0-2), libice-dev (= 2:1.1.1-1+b1), libice6 (= 2:1.1.1-1+b1), libicu-dev (= 78.2-2), libicu78 (= 78.2-2), libidn2-0 (= 2.3.8-4+b1), libidn2-dev (= 2.3.8-4+b1), libintl-perl (= 1.37-1), libisl23 (= 0.27-1+b1), libitm1 (= 16-20260308-1), libjansson4 (= 2.14-2+b4), libjbig-dev (= 2.1-6.1+b3), libjbig0 (= 2.1-6.1+b3), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjxl0.11 (= 0.11.1-6), libk5crypto3 (= 1.22.1-2), libkadm5clnt-mit12 (= 1.22.1-2), libkadm5srv-mit12 (= 1.22.1-2), libkdb5-10t64 (= 1.22.1-2), libkeyutils1 (= 1.6.3-6+b1), libkpathsea6 (= 2025.20250727.75242+ds-5+b2), libkrb5-3 (= 1.22.1-2), libkrb5-dev (= 1.22.1-2), libkrb5support0 (= 1.22.1-2), liblapack-dev (= 3.12.1-7+b1), liblapack3 (= 3.12.1-7+b1), liblcms2-2 (= 2.17-1), libldap-dev (= 2.6.10+dfsg-1+b1), libldap2 (= 2.6.10+dfsg-1+b1), liblerc-dev (= 4.0.0+ds-5+b1), liblerc4 (= 4.0.0+ds-5+b1), libllvm21 (= 1:21.1.8-5), liblzma-dev (= 5.8.2-2), liblzma5 (= 5.8.2-2), liblzo2-2 (= 2.10-3+b2), libmagic-mgc (= 1:5.46-5+b1), libmagic1t64 (= 1:5.46-5+b1), libmd0 (= 1.1.0-2+b2), libmime-charset-perl (= 1.013.1-2), libmount-dev (= 2.41.3-4), libmount1 (= 2.41.3-4), libmpc3 (= 1.3.1-2+b1), libmpfi0 (= 1.5.4+ds-4+b1), libmpfr6 (= 4.2.2-2+b1), libncurses-dev (= 6.6+20251231-1), libncurses6 (= 6.6+20251231-1), libncursesw6 (= 6.6+20251231-1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.68.0-2), libnghttp2-dev (= 1.68.0-2), libnghttp3-9 (= 1.15.0-1), libnghttp3-dev (= 1.15.0-1), libngtcp2-16 (= 1.21.0-1), libngtcp2-crypto-ossl-dev (= 1.21.0-1), libngtcp2-crypto-ossl0 (= 1.21.0-1), libngtcp2-dev (= 1.21.0-1), libnspr4 (= 2:4.38.2-1), libnss3 (= 2:3.121-1), libp11-kit-dev (= 0.26.2-2), libp11-kit0 (= 0.26.2-2), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam-systemd (= 260~rc2-1), libpam0g (= 1.7.0-5+b1), libpango-1.0-0 (= 1.57.0-1), libpango1.0-dev (= 1.57.0-1), libpangocairo-1.0-0 (= 1.57.0-1), libpangoft2-1.0-0 (= 1.57.0-1), libpangoxft-1.0-0 (= 1.57.0-1), libpaper-utils (= 2.2.5-0.3+b3), libpaper2 (= 2.2.5-0.3+b3), libpciaccess0 (= 0.17-3+b4), libpcre2-16-0 (= 10.46-1+b1), libpcre2-32-0 (= 10.46-1+b1), libpcre2-8-0 (= 10.46-1+b1), libpcre2-dev (= 10.46-1+b1), libpcre2-posix3 (= 10.46-1+b1), libpcsclite1 (= 2.4.1-1), libpdfbox-java (= 1:1.8.16-5), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpixman-1-0 (= 0.46.4-1+b1), libpixman-1-dev (= 0.46.4-1+b1), libpkgconf7 (= 2.5.1-4), libpng-dev (= 1.6.55-1), libpng16-16t64 (= 1.6.55-1), libpotrace0 (= 1.16-2+b3), libproc2-0 (= 2:4.0.4-9+b1), libpsl-dev (= 0.21.2-1.1+b2), libpsl5t64 (= 0.21.2-1.1+b2), libptexenc1 (= 2025.20250727.75242+ds-5+b2), libpython3-stdlib (= 3.13.9-3), libpython3.13-minimal (= 3.13.12-1), libpython3.13-stdlib (= 3.13.12-1), libquadmath0 (= 16-20260308-1), libreadline-dev (= 8.3-4), libreadline8t64 (= 8.3-4), librsvg2-2 (= 2.61.3+dfsg-3+b1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3+b1), librtmp1 (= 2.4+20151223.gitfa8646d.1-3+b1), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2+b1), libselinux-dev (= 3.9-4+b1), libselinux1 (= 3.9-4+b1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2+b1), libsepol-dev (= 3.9-2), libsepol2 (= 3.9-2), libsframe3 (= 2.46-3), libsharpyuv-dev (= 1.5.0-0.1+b1), libsharpyuv0 (= 1.5.0-0.1+b1), libsm-dev (= 2:1.2.6-1+b1), libsm6 (= 2:1.2.6-1+b1), libsmartcols1 (= 2.41.3-4), libsombok3 (= 2.4.0-2+b3), libsqlite3-0 (= 3.46.1-9+b1), libssh2-1-dev (= 1.11.1-1+b1), libssh2-1t64 (= 1.11.1-1+b1), libssl-dev (= 3.5.5-1), libssl3t64 (= 3.5.5-1), libstdc++-15-dev (= 15.2.0-15), libstdc++6 (= 16-20260308-1), libsynctex2 (= 2025.20250727.75242+ds-5+b2), libsysprof-capture-4-dev (= 50~beta-1), libsystemd-shared (= 260~rc2-1), libsystemd0 (= 260~rc2-1), libtasn1-6 (= 4.21.0-2), libtasn1-6-dev (= 4.21.0-2), libtcl8.6 (= 8.6.17+dfsg-1+b1), libteckit0 (= 2.5.13+ds-1), libtexlua53-5 (= 2025.20250727.75242+ds-5+b2), libtext-charwidth-perl (= 0.04-11+b5), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-10), libthai-data (= 0.1.30-1), libthai-dev (= 0.1.30-1), libthai0 (= 0.1.30-1), libtiff-dev (= 4.7.1-1), libtiff6 (= 4.7.1-1), libtiffxx6 (= 4.7.1-1), libtinfo6 (= 6.6+20251231-1), libtirpc-common (= 1.3.6+ds-1), libtirpc-dev (= 1.3.6+ds-1), libtirpc3t64 (= 1.3.6+ds-1), libtk8.6 (= 8.6.17-1+b1), libtool (= 2.5.4-9), libubsan1 (= 16-20260308-1), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260~rc2-1), libunbound8 (= 1.24.2-1), libunicode-linebreak-perl (= 0.0.20190101-3), libunistring5 (= 1.4.2-1), libunwind8 (= 1.8.1-0.2), libuuid1 (= 2.41.3-4), libvulkan1 (= 1.4.341.0-1), libwayland-client0 (= 1.24.0-2+b2), libwayland-cursor0 (= 1.24.0-2+b2), libwayland-egl1 (= 1.24.0-2+b2), libwebp-dev (= 1.5.0-0.1+b1), libwebp7 (= 1.5.0-0.1+b1), libwebpdecoder3 (= 1.5.0-0.1+b1), libwebpdemux2 (= 1.5.0-0.1+b1), libwebpmux3 (= 1.5.0-0.1+b1), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libx11-dev (= 2:1.8.13-1), libx11-xcb1 (= 2:1.8.13-1), libxau-dev (= 1:1.0.11-1+b1), libxau6 (= 1:1.0.11-1+b1), libxaw7 (= 2:1.0.16-1+b1), libxcb-dri3-0 (= 1.17.0-2+b2), libxcb-glx0 (= 1.17.0-2+b2), libxcb-present0 (= 1.17.0-2+b2), libxcb-randr0 (= 1.17.0-2+b2), libxcb-render0 (= 1.17.0-2+b2), libxcb-render0-dev (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb-shm0-dev (= 1.17.0-2+b2), libxcb-sync1 (= 1.17.0-2+b2), libxcb-xfixes0 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxcb1-dev (= 1.17.0-2+b2), libxcomposite1 (= 1:0.4.6-1+b1), libxcursor1 (= 1:1.2.3-1+b1), libxdamage1 (= 1:1.1.7-1), libxdmcp-dev (= 1:1.1.5-2), libxdmcp6 (= 1:1.1.5-2), libxext-dev (= 2:1.3.4-1+b4), libxext6 (= 2:1.3.4-1+b4), libxfixes3 (= 1:6.0.0-2+b5), libxfont2 (= 1:2.0.6-2), libxft-dev (= 2.3.6-1+b5), libxft2 (= 2.3.6-1+b5), libxi6 (= 2:1.8.2-2), libxinerama1 (= 2:1.1.4-3+b5), libxkbcommon0 (= 1.13.1-1), libxkbfile1 (= 1:1.1.0-1+b5), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-7), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libxmu6 (= 2:1.1.3-4), libxmuu1 (= 2:1.1.3-4), libxpm4 (= 1:3.5.17-1+b4), libxrandr2 (= 2:1.5.4-1+b4), libxrender-dev (= 1:0.9.12-1+b1), libxrender1 (= 1:0.9.12-1+b1), libxshmfence1 (= 1.3.3-1+b1), libxss-dev (= 1:1.2.3-1+b4), libxss1 (= 1:1.2.3-1+b4), libxt-dev (= 1:1.2.1-1.3+b1), libxt6t64 (= 1:1.2.1-1.3+b1), libxtst6 (= 2:1.2.5-1+b1), libxxf86vm1 (= 1:1.1.4-2), libyaml-tiny-perl (= 1.76-1), libz3-4 (= 4.13.3-1+b1), libzstd-dev (= 1.5.7+dfsg-3+b1), libzstd1 (= 1.5.7+dfsg-3+b1), linux-libc-dev (= 6.19.6-1), lmodern (= 2.005-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), media-types (= 14.0.0), mesa-libgallium (= 26.0.1-2), mount (= 2.41.3-4), mpack (= 1.6-19), native-architecture (= 0.2.6), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), nettle-dev (= 3.10.2-1), openjdk-25-jdk (= 25.0.3~5ea-1), openjdk-25-jdk-headless (= 25.0.3~5ea-1), openjdk-25-jre (= 25.0.3~5ea-1), openjdk-25-jre-headless (= 25.0.3~5ea-1), openssl (= 3.5.5-1), openssl-provider-legacy (= 3.5.5-1), pango1.0-tools (= 1.57.0-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), preview-latex-style (= 13.2-1.1), procps (= 2:4.0.4-9+b1), python3 (= 3.13.9-3), python3-minimal (= 3.13.9-3), python3-packaging (= 25.0-2), python3.13 (= 3.13.12-1), python3.13-minimal (= 3.13.12-1), readline-common (= 8.3-4), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), shared-mime-info (= 2.4-5+b3), systemd (= 260~rc2-1), systemd-sysv (= 260~rc2-1), sysvinit-utils (= 3.15-6), t1utils (= 1.41-4), tar (= 1.35+dfsg-4), tcl8.6 (= 8.6.17+dfsg-1+b1), tcl8.6-dev (= 8.6.17+dfsg-1+b1), tex-common (= 6.20), texinfo (= 7.2-5), texinfo-lib (= 7.2-5), texlive-base (= 2025.20260124-1), texlive-binaries (= 2025.20250727.75242+ds-5+b2), texlive-extra-utils (= 2025.20260124-1), texlive-fonts-extra (= 2025.20260124-1), texlive-fonts-recommended (= 2025.20260124-1), texlive-latex-base (= 2025.20260124-1), texlive-latex-extra (= 2025.20260124-1), texlive-latex-recommended (= 2025.20260124-1), texlive-luatex (= 2025.20260124-1), texlive-pictures (= 2025.20260124-1), texlive-plain-generic (= 2025.20260124-1), tk8.6 (= 8.6.17-1+b1), tk8.6-dev (= 8.6.17-1+b1), tzdata (= 2026a-1), ucf (= 3.0052), util-linux (= 2.41.3-4), uuid-dev (= 2.41.3-4), x11-common (= 1:7.7+26), x11-xkb-utils (= 7.7+9), x11proto-dev (= 2025.1-1), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xfonts-base (= 1:1.0.5+nmu1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.46-2), xorg-sgml-doctools (= 1:1.11-1.1), xserver-common (= 2:21.1.21-1), xtrans-dev (= 1.6.0-1), xvfb (= 2:21.1.21-1), xz-utils (= 5.8.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-3) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1773229321" +------------------------------------------------------------------------------+ | Package contents Wed, 11 Mar 2026 16:37:16 +0000 | +------------------------------------------------------------------------------+ r-base-core-dbgsym_4.5.3-1_i386.deb ----------------------------------- new Debian package, version 2.0. size 6007928 bytes: control archive=1352 bytes. 1040 bytes, 12 lines control 1908 bytes, 18 lines md5sums Package: r-base-core-dbgsym Source: r-base Version: 4.5.3-1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Dirk Eddelbuettel Installed-Size: 6203 Depends: r-base-core (= 4.5.3-1) Section: debug Priority: optional Description: debug symbols for r-base-core Build-Ids: 102fa357bf316074b8f6379b4d51e14cbc86a87d 1793e33b1ca33eb81c3c3a5d2d2ffaaff842ab0d 325333779adebbbbab30516b3aa21d215be668d7 3d026808410d7cb07140f9142cc67fa9c807e78a 5abe7b8d6a6a869d697035d67902db95b94e4ac5 68342851c9cc9c2f7123945132a9a37419ed4816 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libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.41), libcairo2 (>= 1.15.10), libcurl4t64 (>= 7.28.0), libdeflate0 (>= 1.0), libglib2.0-0t64 (>= 2.12.0), libgomp1 (>= 4.9), libicu78 (>= 78.1-1~), libjpeg62-turbo (>= 1.3.1), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.18.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre2-8-0 (>= 10.22), libpng16-16t64 (>= 1.6.46), libreadline8t64 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff6 (>= 4.0.3), libtirpc3t64 (>= 1.0.2), libtk8.6 (>= 8.6.0), libx11-6, libxt6t64, libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates Recommends: r-recommended, r-base-dev, r-doc-html Suggests: elpa-ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html Breaks: r-bioc-bioccheck (<< 1.42.1+dfsg-2~), r-bioc-graph (<< 1.84.1-2~), r-bioc-iranges (<< 2.40.1-3~), r-bioc-pwalign (<< 1.2.0-3~), r-cran-rlang (<< 1.1.5-2~), r-cran-testthat (<< 3.2.3~) Replaces: r-base (<= 1.4.1-1), r-recommended (<< 1.9.0) Provides: r-api-4.0, r-graphics-engine-16 Section: gnu-r Priority: optional Homepage: https://www.R-project.org/ Description: GNU R core of statistical computation and graphics system R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the core GNU R system from which only the optional documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info have been split off to somewhat reduce the size of this package. drwxr-xr-x root/root 0 2026-03-11 11:42 ./ drwxr-xr-x root/root 0 2026-03-11 11:42 ./etc/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./etc/R/ -rw-r--r-- root/root 10393 2026-03-11 11:42 ./etc/R/Makeconf -rw-r--r-- root/root 1983 2026-03-11 11:42 ./etc/R/Renviron.site -rw-r--r-- root/root 988 2026-03-11 11:42 ./etc/R/Rprofile.site -rw-r--r-- root/root 777 2026-03-11 11:42 ./etc/R/ldpaths -rw-r--r-- root/root 1179 2026-03-11 11:42 ./etc/R/repositories drwxr-xr-x root/root 0 2026-03-11 11:42 ./etc/ld.so.conf.d/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/bin/ -rwxr-xr-x root/root 9061 2026-03-11 11:42 ./usr/bin/R -rwxr-xr-x root/root 13800 2026-03-11 11:42 ./usr/bin/Rscript drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/R/ lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/lib/R/COPYING -> ../../share/common-licenses/GPL-2 -rw-r--r-- root/root 46 2026-03-11 11:42 ./usr/lib/R/SVN-REVISION drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/R/bin/ -rwxr-xr-x root/root 1838 2026-03-11 11:42 ./usr/lib/R/bin/BATCH -rwxr-xr-x root/root 2168 2026-03-11 11:42 ./usr/lib/R/bin/COMPILE -rwxr-xr-x root/root 825 2026-03-11 11:42 ./usr/lib/R/bin/INSTALL -rwxr-xr-x root/root 1324 2026-03-11 11:42 ./usr/lib/R/bin/LINK -rwxr-xr-x root/root 9061 2026-03-11 11:42 ./usr/lib/R/bin/R -rwxr-xr-x root/root 160 2026-03-11 11:42 ./usr/lib/R/bin/REMOVE -rwxr-xr-x root/root 1428 2026-03-11 11:42 ./usr/lib/R/bin/Rcmd -rwxr-xr-x root/root 318 2026-03-11 11:42 ./usr/lib/R/bin/Rd2pdf -rwxr-xr-x root/root 361 2026-03-11 11:42 ./usr/lib/R/bin/Rdconv -rwxr-xr-x root/root 260 2026-03-11 11:42 ./usr/lib/R/bin/Rdiff -rwxr-xr-x root/root 312 2026-03-11 11:42 ./usr/lib/R/bin/Rprof -rwxr-xr-x root/root 13800 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2026-03-11 11:42 ./usr/share/texmf/tex/latex/ lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/share/texmf/tex/latex/R -> ../../../R/share/texmf r-mathlib-dbgsym_4.5.3-1_i386.deb --------------------------------- new Debian package, version 2.0. size 187048 bytes: control archive=512 bytes. 336 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: r-mathlib-dbgsym Source: r-base Version: 4.5.3-1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Dirk Eddelbuettel Installed-Size: 201 Depends: r-mathlib (= 4.5.3-1) Section: debug Priority: optional Description: debug symbols for r-mathlib Build-Ids: 31b31bdc7439603deb345eae72027299083e2d32 drwxr-xr-x root/root 0 2026-03-11 11:42 ./ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/debug/.build-id/31/ -rw-r--r-- root/root 195112 2026-03-11 11:42 ./usr/lib/debug/.build-id/31/b31bdc7439603deb345eae72027299083e2d32.debug drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/share/doc/r-mathlib-dbgsym -> r-mathlib r-mathlib_4.5.3-1_i386.deb -------------------------- new Debian package, version 2.0. size 2718852 bytes: control archive=2144 bytes. 1760 bytes, 39 lines control 1502 bytes, 22 lines md5sums 369 bytes, 27 lines * postinst #!/bin/sh 32 bytes, 1 lines shlibs 66 bytes, 2 lines triggers Package: r-mathlib Source: r-base Version: 4.5.3-1 Architecture: i386 Maintainer: Dirk Eddelbuettel Installed-Size: 3232 Depends: libc6 (>= 2.41) Recommends: r-base-core (= 4.5.3-1), r-base-dev (= 4.5.3-1) Section: gnu-r Priority: optional Homepage: https://www.R-project.org/ Description: GNU R standalone mathematics library R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the libRmath shared and static libraries which can be called from standalone C or C++ code. drwxr-xr-x root/root 0 2026-03-11 11:42 ./ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/include/ -rw-r--r-- root/root 20224 2026-03-11 11:42 ./usr/include/Rmath.h drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/ -rw-r--r-- root/root 446956 2026-03-11 11:42 ./usr/lib/libRmath.a lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/lib/libRmath.so -> libRmath.so.1 lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0 -rw-r--r-- root/root 235312 2026-03-11 11:42 ./usr/lib/libRmath.so.1.0.0 drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 173 2026-03-11 11:42 ./usr/lib/pkgconfig/libRmath.pc drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/doc/r-mathlib/ -rw-r--r-- root/root 35933 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.0.gz -rw-r--r-- root/root 108741 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.1.gz -rw-r--r-- root/root 96634 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.Rd.gz -rw-r--r-- root/root 229623 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.gz -rw-r--r-- root/root 397706 2026-03-11 11:42 ./usr/share/doc/r-mathlib/NEWS.2.rds.gz -rw-r--r-- root/root 122205 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.Rd.gz -rw-r--r-- root/root 113053 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.gz -rw-r--r-- root/root 515294 2026-03-11 11:42 ./usr/share/doc/r-mathlib/NEWS.3.rds.gz -rw-r--r-- root/root 91852 2026-03-04 16:15 ./usr/share/doc/r-mathlib/NEWS.Rd.gz lrwxrwxrwx root/root 0 2026-03-11 11:42 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz -rw-r--r-- root/root 354511 2026-03-11 11:42 ./usr/share/doc/r-mathlib/NEWS.pdf.gz -rw-r--r-- root/root 394263 2026-03-11 11:42 ./usr/share/doc/r-mathlib/NEWS.rds.gz -rw-r--r-- root/root 2119 2025-04-01 22:15 ./usr/share/doc/r-mathlib/README.gz -rw-r--r-- root/root 3026 2025-10-31 11:19 ./usr/share/doc/r-mathlib/README.mathlib -rw-r--r-- root/root 2169 2026-03-11 11:42 ./usr/share/doc/r-mathlib/changelog.Debian.gz -rw-r--r-- root/root 84274 2026-03-11 11:42 ./usr/share/doc/r-mathlib/changelog.gz -rw-r--r-- root/root 20761 2025-10-31 11:19 ./usr/share/doc/r-mathlib/copyright drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/doc/r-mathlib/examples/ -rw-r--r-- root/root 1692 2025-03-13 23:02 ./usr/share/doc/r-mathlib/examples/test.c drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-03-11 11:42 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 364 2025-10-31 11:19 ./usr/share/lintian/overrides/r-mathlib +------------------------------------------------------------------------------+ | Post Build Wed, 11 Mar 2026 16:37:19 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Wed, 11 Mar 2026 16:37:19 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Wed, 11 Mar 2026 16:37:25 +0000 | +------------------------------------------------------------------------------+ Build Architecture: i386 Build Type: any Build-Space: 364700 Build-Time: 497 Distribution: unstable Host Architecture: i386 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdwiQqd1/inputs/r-base_4.5.3-1.dsc Machine Architecture: amd64 Package: r-base Package-Time: 526 Source-Version: 4.5.3-1 Space: 364700 Status: successful Version: 4.5.3-1 -------------------------------------------------------------------------------- Finished at 2026-03-11T16:37:14Z Build needed 00:08:46, 364700k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdwiQqd1/out checking r-base-core-dbgsym_4.5.3-1_i386.deb: size... sha256... md5... sha1... all OK checking r-base-core_4.5.3-1_i386.deb: size differs for r-base-core_4.5.3-1_i386.deb