=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo Source: consensuscore Version: 1.1.1+dfsg-9 rebuilderd-worker node: infom08-amd64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 26 Sep 2026 01:12:27 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.7 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [230 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [1840 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [105 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [309 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3412 B] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7876 B] Get:18 https://deb.debian.org/debian forky/main Sources [11.3 MB] Get:19 https://deb.debian.org/debian sid/main Sources [12.0 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.6 kB] Get:21 https://deb.debian.org/debian experimental/main Sources [380 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Fetched 35.6 MB in 31s (1132 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.dsc' consensuscore_1.1.1+dfsg-9.dsc 2374 SHA256:a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.debian.tar.xz' consensuscore_1.1.1+dfsg-9.debian.tar.xz 10340 SHA256:4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e consensuscore_1.1.1+dfsg-9.debian.tar.xz a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf consensuscore_1.1.1+dfsg-9.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 26 Sep 2026 01:12:59 +0000 | +------------------------------------------------------------------------------+ + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdGCP2kN/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9+b2_i386.buildinfoRebuilding consensuscore=1.1.1+dfsg-9 in /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs now. /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! WARNING:root:found partial file in cache, consider deleting it manually: /srv/rebuilderd/cache/archive/debian/20260910T022834Z/dists/unstable/main/binary-i386/by-hash/SHA256/7b54d33bb06e1c25298da85d875077bf2780b9326573ff44d4492b3e343b2d65.1951951.part WARNING:root:found partial file in cache, consider deleting it manually: /srv/rebuilderd/cache/archive/debian/20260908T022630Z/dists/forky/main/binary-i386/by-hash/SHA256/449c832f1d02a3a566ebfec728a5eaacecdd4fe13c4caa91242ed1deaf10e04b.1765761.part Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable InRelease [193 kB] Get:3 http://snapshot.debian.org/archive/debian/20260906T023042Z unstable InRelease [193 kB] Get:4 http://deb.debian.org/debian unstable/main i386 Packages [10.4 MB] Get:5 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 Packages [10.3 MB] Get:6 http://snapshot.debian.org/archive/debian/20260906T023042Z unstable/main i386 Packages [10.4 MB] Fetched 31.7 MB in 3s (11.2 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260904T025144Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20260906T023042Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main i386 libacl1 i386 2.4.0-1 [38.6 kB] Get:2 http://deb.debian.org/debian unstable/main i386 architecture-properties i386 0.2.6+b2 [2632 B] Get:3 http://deb.debian.org/debian unstable/main i386 libattr1 i386 1:2.6.0-1 [25.2 kB] Get:4 http://deb.debian.org/debian unstable/main i386 autoconf all 2.73-2 [516 kB] Get:5 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:6 http://deb.debian.org/debian unstable/main i386 base-files i386 14.2 [87.9 kB] Get:7 http://deb.debian.org/debian unstable/main i386 base-passwd i386 3.6.8 [55.1 kB] Get:8 http://deb.debian.org/debian unstable/main i386 libboost-dev i386 1.90.0.2+nmu1 [3200 B] Get:9 http://deb.debian.org/debian unstable/main i386 libboost1.90-dev i386 1.90.0-6.1+b1 [11.3 MB] Get:10 http://deb.debian.org/debian unstable/main i386 build-essential i386 12.12 [4620 B] Get:11 http://deb.debian.org/debian unstable/main i386 bzip2 i386 1.0.8-6+b2 [40.6 kB] Get:12 http://deb.debian.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-6+b2 [37.5 kB] Get:13 http://deb.debian.org/debian unstable/main i386 libdebconfclient0 i386 0.283 [7596 B] Get:14 http://deb.debian.org/debian unstable/main i386 coreutils i386 9.10-1 [3183 kB] Get:15 http://deb.debian.org/debian unstable/main i386 dash i386 0.5.12-12 [103 kB] Get:16 http://deb.debian.org/debian unstable/main i386 libdb5.3t64 i386 5.3.28+dfsg2-11+b1 [767 kB] Get:17 http://deb.debian.org/debian unstable/main i386 debconf all 1.5.92 [123 kB] Get:18 http://deb.debian.org/debian unstable/main i386 debianutils i386 5.24 [94.0 kB] Get:19 http://deb.debian.org/debian unstable/main i386 dh-exec i386 0.31 [26.4 kB] Get:20 http://deb.debian.org/debian unstable/main i386 dh-python all 7.20260623 [114 kB] Get:21 http://deb.debian.org/debian unstable/main i386 diffutils i386 1:3.12-1 [413 kB] Get:22 http://deb.debian.org/debian unstable/main i386 dwz i386 0.17-1 [115 kB] Get:23 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.196-1 [68.1 kB] Get:24 http://deb.debian.org/debian unstable/main i386 file i386 1:5.47-4 [43.1 kB] Get:25 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.47-4 [345 kB] Get:26 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.47-4 [118 kB] Get:27 http://deb.debian.org/debian unstable/main i386 findutils i386 4.11.0-2 [795 kB] Get:28 http://deb.debian.org/debian unstable/main i386 cpp i386 4:16.1.0-3 [1560 B] Get:29 http://deb.debian.org/debian unstable/main i386 cpp-i686-linux-gnu i386 4:16.1.0-3 [4460 B] Get:30 http://deb.debian.org/debian unstable/main i386 g++ i386 4:16.1.0-3 [1340 B] Get:31 http://deb.debian.org/debian unstable/main i386 g++-i686-linux-gnu i386 4:16.1.0-3 [1192 B] Get:32 http://deb.debian.org/debian unstable/main i386 gcc i386 4:16.1.0-3 [5140 B] Get:33 http://deb.debian.org/debian unstable/main i386 gcc-i686-linux-gnu i386 4:16.1.0-3 [1428 B] Get:34 http://deb.debian.org/debian unstable/main i386 libgdbm-compat4t64 i386 1.26-1+b2 [52.6 kB] Get:35 http://deb.debian.org/debian unstable/main i386 libgdbm6t64 i386 1.26-1+b2 [83.3 kB] Get:36 http://deb.debian.org/debian unstable/main i386 libgmp10 i386 2:6.3.0+dfsg-5+b2 [570 kB] Get:37 http://deb.debian.org/debian unstable/main i386 grep i386 3.12-1 [451 kB] Get:38 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.24.1-1 [1351 kB] Get:39 http://deb.debian.org/debian unstable/main i386 gzip i386 1.14-1 [149 kB] Get:40 http://deb.debian.org/debian unstable/main i386 hostname i386 3.25 [11.3 kB] Get:41 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:42 http://deb.debian.org/debian unstable/main i386 libisl23 i386 0.28-1 [756 kB] Get:43 http://deb.debian.org/debian unstable/main i386 libjansson4 i386 2.15.1-1 [69.5 kB] Get:44 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-8 [147 kB] Get:45 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-8 [2155 kB] Get:46 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get:47 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.8.0-2 [27.7 kB] Get:48 http://deb.debian.org/debian unstable/main i386 libmd0 i386 1.2.0-2 [46.4 kB] Get:49 http://deb.debian.org/debian unstable/main i386 libcrypt1 i386 1:4.5.2+20251210-1 [103 kB] Get:50 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:51 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:52 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.42.3-1 [107 kB] Get:53 http://deb.debian.org/debian unstable/main i386 libblkid1 i386 2.42.3-1 [200 kB] Get:54 http://deb.debian.org/debian unstable/main i386 libmount1 i386 2.42.3-1 [242 kB] Get:55 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libaudit-common all 1:4.1.2-1 [14.3 kB] Get:56 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libaudit1 i386 1:4.1.2-1+b1 [58.5 kB] Get:57 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 automake all 1:1.18.1-4 [877 kB] Get:58 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 bash i386 5.3-3+b1 [1614 kB] Get:59 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 binutils i386 2.47-2 [289 kB] Get:60 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 binutils-common i386 2.47-2 [2685 kB] Get:61 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 binutils-i686-linux-gnu i386 2.47-2 [1130 kB] Get:62 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libbinutils i386 2.47-2 [583 kB] Get:63 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libctf-nobfd0 i386 2.47-2 [161 kB] Get:64 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libctf0 i386 2.47-2 [96.5 kB] Get:65 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libgprofng0 i386 2.47-2 [857 kB] Get:66 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 debhelper all 14.3 [934 kB] Get:67 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libdebhelper-perl all 14.3 [77.3 kB] Get:68 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 dh-autoreconf all 22 [12.2 kB] Get:69 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 dpkg i386 1.23.7 [1557 kB] Get:70 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 dpkg-dev all 1.23.7 [1318 kB] Get:71 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libdpkg-perl all 1.23.7 [669 kB] Get:72 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libexpat1 i386 2.8.4-1 [135 kB] Get:73 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libexpat1-dev i386 2.8.4-1 [195 kB] Get:74 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 cpp-16 i386 16.2.0-2 [1268 B] Get:75 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 cpp-16-i686-linux-gnu i386 16.2.0-2 [80.0 MB] Get:76 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 g++-16 i386 16.2.0-2 [35.2 kB] Get:77 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 g++-16-i686-linux-gnu i386 16.2.0-2 [85.6 MB] Get:78 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 gcc-16 i386 16.2.0-2 [535 kB] Get:79 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 gcc-16-base i386 16.2.0-2 [38.4 kB] Get:80 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 gcc-16-i686-linux-gnu i386 16.2.0-2 [91.6 MB] Get:81 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libasan8 i386 16.2.0-2 [2734 kB] Get:82 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libatomic1 i386 16.2.0-2 [8160 B] Get:83 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libcc1-0 i386 16.2.0-2 [46.4 kB] Get:84 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libgcc-16-dev i386 16.2.0-2 [2661 kB] Get:85 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libgcc-s1 i386 16.2.0-2 [87.7 kB] Get:86 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libgfortran5 i386 16.2.0-2 [753 kB] Get:87 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libgomp1 i386 16.2.0-2 [153 kB] Get:88 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libitm1 i386 16.2.0-2 [28.9 kB] Get:89 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 autopoint all 1.0-3 [820 kB] Get:90 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 gettext i386 1.0-3 [2697 kB] Get:91 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 gettext-base i386 1.0-3 [333 kB] Get:92 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libc-bin i386 2.43-4 [644 kB] Get:93 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libc-dev-bin i386 2.43-4 [38.9 kB] Get:94 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libc-gconv-modules-extra i386 2.43-4 [1097 kB] Get:95 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libc6 i386 2.43-4 [1736 kB] Get:96 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libc6-dev i386 2.43-4 [1885 kB] Get:97 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 init-system-helpers all 1.69+nmu1 [37.1 kB] Get:98 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libcap-ng0 i386 0.9.5-1 [19.4 kB] Get:99 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libjs-sphinxdoc all 9.1.0-7 [46.1 kB] Get:100 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 liblzma5 i386 5.8.3-1 [343 kB] Fetched 312 MB in 5s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/base-passwd_3.6.8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libdb5.3t64_5.3.28+dfsg2-11+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/build-essential_12.12_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/base-files_14.2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/bsdextrautils_2.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/liblapack3_3.12.1-8_i386.deb' dpkg-name: info: moved 'gcc_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/gcc_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libbinutils_2.47-2_i386.deb' dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libmagic-mgc_5.47-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/liblzma5_5.8.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gzip_1.14-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgcc-16-dev_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libbz2-1.0_1.0.8-6+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/binutils-i686-linux-gnu_2.47-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libisl23_0.28-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libffi8_3.8.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libdpkg-perl_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/binutils_2.47-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libboost1.90-dev_1.90.0-6.1+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libcc1-0_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/groff-base_1.24.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libcap-ng0_0.9.5-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/findutils_4.11.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libblas3_3.12.1-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/autotools-dev_20240727.1+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dh-strip-nondeterminism_1.15.1-1_all.deb' dpkg-name: info: moved 'g++-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/g++-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgdbm6t64_1.26-1+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libc-bin_2.43-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libatomic1_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/architecture-properties_0.2.6+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gcc-16_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libblkid1_2.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/coreutils_9.10-1_i386.deb' dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/automake_1.18.1-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gcc-16-base_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/bash_5.3-3+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dpkg_1.23.7_i386.deb' dpkg-name: info: moved 'gcc-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/gcc-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dh-autoreconf_22_all.deb' dpkg-name: info: moved 'g++_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/g++_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgfortran5_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gettext-base_1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libjansson4_2.15.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libacl1_2.4.0-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libexpat1-dev_2.8.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libc-dev-bin_2.43-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gcc-16-i686-linux-gnu_16.2.0-2_i386.deb' dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libaudit-common_4.1.2-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libc-gconv-modules-extra_2.43-4_i386.deb' dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libaudit1_4.1.2-1+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/autoconf_2.73-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/g++-16_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dpkg-dev_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libjs-sphinxdoc_9.1.0-7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libdebconfclient0_0.283_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libc6_2.43-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/gettext_1.0-3_i386.deb' dpkg-name: info: moved 'file_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/file_5.47-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libmount1_2.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/debianutils_5.24_i386.deb' dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libattr1_2.6.0-1_i386.deb' dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libmagic1t64_5.47-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgcc-s1_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgdbm-compat4t64_1.26-1+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/autopoint_1.0-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dash_0.5.12-12_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dh-python_7.20260623_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/bzip2_1.0.8-6+b2_i386.deb' dpkg-name: info: moved 'cpp-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/cpp-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgprofng0_2.47-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libctf0_2.47-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libitm1_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libmd0_1.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/debhelper_14.3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libdebhelper-perl_14.3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/binutils-common_2.47-2_i386.deb' dpkg-name: info: moved 'cpp_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/cpp_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/cpp-16_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dwz_0.17-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/debconf_1.5.92_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/grep_3.12-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/init-system-helpers_1.69+nmu1_all.deb' dpkg-name: info: moved 'libcrypt1_1%3a4.5.2+20251210-1_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libcrypt1_4.5.2+20251210-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/g++-16-i686-linux-gnu_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/cpp-16-i686-linux-gnu_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libelf1t64_0.196-1_i386.deb' dpkg-name: info: moved 'diffutils_1%3a3.12-1_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/diffutils_3.12-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/hostname_3.25_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgomp1_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libboost-dev_1.90.0.2+nmu1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libexpat1_2.8.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/dh-exec_0.31_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libctf-nobfd0_2.47-2_i386.deb' dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_i386.deb' to '/srv/rebuilderd/tmp/tmpm5ce1e1p/libgmp10_6.3.0+dfsg-5+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libc6-dev_2.43-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5ce1e1p/libasan8_16.2.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 python3-jaraco.context all 6.0.1-2 [8184 B] Get:2 http://deb.debian.org/debian unstable/main i386 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:3 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-3 [49.4 kB] Get:4 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.4.2-1 [473 kB] Get:5 http://deb.debian.org/debian unstable/main i386 libzstd1 i386 1.5.7+dfsg-4 [304 kB] Get:6 http://deb.debian.org/debian unstable/main i386 linux-libc-dev all 7.1.12-1 [2062 kB] Get:7 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.21-1 [335 kB] Get:8 http://deb.debian.org/debian unstable/main i386 make i386 4.4.1-3 [470 kB] Get:9 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.1-1 [1478 kB] Get:10 http://deb.debian.org/debian unstable/main i386 media-types all 14.0.0 [30.8 kB] Get:11 http://deb.debian.org/debian unstable/main i386 libmpc3 i386 1.3.1-3 [59.6 kB] Get:12 http://deb.debian.org/debian unstable/main i386 libmpfr6 i386 4.2.2-3 [757 kB] Get:13 http://deb.debian.org/debian unstable/main i386 libncursesw6 i386 6.6+20260608-2 [148 kB] Get:14 http://deb.debian.org/debian unstable/main i386 libtinfo6 i386 6.6+20260608-2 [353 kB] Get:15 http://deb.debian.org/debian unstable/main i386 ncurses-base all 6.6+20260608-2 [276 kB] Get:16 http://deb.debian.org/debian unstable/main i386 ncurses-bin i386 6.6+20260608-2 [447 kB] Get:17 http://deb.debian.org/debian unstable/main i386 netbase all 6.6 [10.3 kB] Get:18 http://deb.debian.org/debian unstable/main i386 libssl3t64 i386 3.6.4-1 [2559 kB] Get:19 http://deb.debian.org/debian unstable/main i386 openssl-provider-legacy i386 3.6.4-1 [321 kB] Get:20 http://deb.debian.org/debian unstable/main i386 libpam-modules i386 1.7.0-8 [182 kB] Get:21 http://deb.debian.org/debian unstable/main i386 libpam-modules-bin i386 1.7.0-8 [48.8 kB] Get:22 http://deb.debian.org/debian unstable/main i386 libpam-runtime all 1.7.0-8 [246 kB] Get:23 http://deb.debian.org/debian unstable/main i386 libpam0g i386 1.7.0-8 [69.8 kB] Get:24 http://deb.debian.org/debian unstable/main i386 patch i386 2.8-2 [142 kB] Get:25 http://deb.debian.org/debian unstable/main i386 libperl5.42 i386 5.42.3-1 [3895 kB] Get:26 http://deb.debian.org/debian unstable/main i386 perl i386 5.42.3-1 [266 kB] Get:27 http://deb.debian.org/debian unstable/main i386 perl-base i386 5.42.3-1 [1959 kB] Get:28 http://deb.debian.org/debian unstable/main i386 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:29 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.22 [216 kB] Get:30 http://deb.debian.org/debian unstable/main i386 python3-autocommand all 2.2.2-4 [13.7 kB] Get:31 http://deb.debian.org/debian unstable/main i386 python3-inflect all 7.5.0-2 [32.8 kB] Get:32 http://deb.debian.org/debian unstable/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:33 http://deb.debian.org/debian unstable/main i386 python3-typeguard all 4.4.4-3 [37.1 kB] Get:34 http://deb.debian.org/debian unstable/main i386 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:35 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.14.7-3 [1012 B] Get:36 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.14.7-3 [8492 B] Get:37 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.14.7-3 [8248 B] Get:38 http://deb.debian.org/debian unstable/main i386 python3 i386 3.14.7-3 [26.0 kB] Get:39 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.14.7-3 [984 B] Get:40 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.14.7-3 [1008 B] Get:41 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.14.7-3 [26.7 kB] Get:42 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.14.7-3 [25.3 kB] Get:43 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.3-4 [185 kB] Get:44 http://deb.debian.org/debian unstable/main i386 readline-common all 8.3-4 [74.8 kB] Get:45 http://deb.debian.org/debian unstable/main i386 sed i386 4.9-3 [334 kB] Get:46 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.26 [27.0 kB] Get:47 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 80.9.0-2 [224 kB] Get:48 http://deb.debian.org/debian unstable/main i386 libsimde-dev all 0.8.4~rc3-5 [500 kB] Get:49 http://deb.debian.org/debian unstable/main i386 libsqlite3-0 i386 3.53.4-2 [1050 kB] Get:50 http://deb.debian.org/debian unstable/main i386 sysvinit-utils i386 3.18-1 [30.2 kB] Get:51 http://deb.debian.org/debian unstable/main i386 tzdata all 2026c-1 [260 kB] Get:52 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-2+b2 [69.2 kB] Get:53 http://deb.debian.org/debian unstable/main i386 libsmartcols1 i386 2.42.3-1 [161 kB] Get:54 http://deb.debian.org/debian unstable/main i386 libuuid1 i386 2.42.3-1 [35.6 kB] Get:55 http://deb.debian.org/debian unstable/main i386 util-linux i386 2.42.3-1 [1282 kB] Get:56 http://deb.debian.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg+really1.3.2-3 [86.9 kB] Get:57 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.2-3 [915 kB] Get:58 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libsframe3 i386 2.47-2 [85.5 kB] Get:59 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libquadmath0 i386 16.2.0-2 [231 kB] Get:60 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libstdc++-16-dev i386 16.2.0-2 [2768 kB] Get:61 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libstdc++6 i386 16.2.0-2 [857 kB] Get:62 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libubsan1 i386 16.2.0-2 [1107 kB] Get:63 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libseccomp2 i386 2.6.1-1 [52.7 kB] Get:64 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libselinux1 i386 3.11-2 [90.8 kB] Get:65 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libtool all 2.6.2-2 [553 kB] Get:66 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 mawk i386 1.3.4.20260302-1 [145 kB] Get:67 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3-more-itertools all 11.1.0-2 [74.5 kB] Get:68 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3-numpy i386 1:2.4.6+ds-4 [6465 kB] Get:69 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3-numpy-dev i386 1:2.4.6+ds-4 [145 kB] Get:70 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libpcre2-8-0 i386 10.48-2 [308 kB] Get:71 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3-zipp all 3.23.0-1 [11.0 kB] Get:72 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libpython3.14 i386 3.14.7-1 [2439 kB] Get:73 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libpython3.14-dev i386 3.14.7-1 [5768 kB] Get:74 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libpython3.14-minimal i386 3.14.7-1 [898 kB] Get:75 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libpython3.14-stdlib i386 3.14.7-1 [2364 kB] Get:76 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3.14 i386 3.14.7-1 [861 kB] Get:77 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3.14-dev i386 3.14.7-1 [508 kB] Get:78 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3.14-minimal i386 3.14.7-1 [2662 kB] Get:79 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 python3-setuptools all 80.9.0-2 [698 kB] Get:80 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 swig i386 4.5.0-3 [1664 kB] Get:81 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libsystemd0 i386 262~rc1-2 [517 kB] Get:82 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 libudev1 i386 262~rc1-2 [149 kB] Get:83 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 tar i386 1.35+dfsg-5 [846 kB] Get:84 http://snapshot.debian.org/archive/debian/20260904T025144Z unstable/main i386 xz-utils i386 5.8.3-1 [745 kB] Get:85 http://snapshot.debian.org/archive/debian/20260906T023042Z unstable/main i386 libxml2-16 i386 2.15.3+dfsg-1+b1 [701 kB] Fetched 59.6 MB in 1s (64.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/sensible-utils_0.0.26_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpython3-all-dev_3.14.7-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/po-debconf_1.0.22_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/mawk_1.3.4.20260302-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libsmartcols1_2.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3.14_3.14.7-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-dev_3.14.7-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpam-modules-bin_1.7.0-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libreadline8t64_8.3-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3_3.14.7-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/swig_4.5.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libstdc++-16-dev_16.2.0-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/readline-common_8.3-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libtinfo6_6.6+20260608-2_i386.deb' dpkg-name: warning: skipping 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'/srv/rebuilderd/tmp/tmp8t732qyw/ncurses-base_6.6+20260608-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libselinux1_3.11-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpython3.14-stdlib_3.14.7-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/tar_1.35+dfsg-5_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libubsan1_16.2.0-2_i386.deb' dpkg-name: info: moved 'python3-numpy_1%3a2.4.6+ds-4_i386.deb' to '/srv/rebuilderd/tmp/tmp8t732qyw/python3-numpy_2.4.6+ds-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3.14-dev_3.14.7-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpam-runtime_1.7.0-8_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/perl-base_5.42.3-1_i386.deb' dpkg-name: info: moved 'python3-numpy-dev_1%3a2.4.6+ds-4_i386.deb' to '/srv/rebuilderd/tmp/tmp8t732qyw/python3-numpy-dev_2.4.6+ds-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libperl5.42_5.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-setuptools_80.9.0-2_all.deb' dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_i386.deb' to '/srv/rebuilderd/tmp/tmp8t732qyw/zlib1g_1.3.dfsg+really1.3.2-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-minimal_3.14.7-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpython3.14_3.14.7-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/sed_4.9-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-jaraco.text_4.0.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libudev1_262~rc1-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libsystemd0_262~rc1-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-pkg-resources_80.9.0-2_all.deb' 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'/srv/rebuilderd/tmp/tmp8t732qyw/libsimde-dev_0.8.4~rc3-5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/openssl-provider-legacy_3.6.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpam0g_1.7.0-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libseccomp2_2.6.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/make_4.4.1-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/libpython3-dev_3.14.7-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-more-itertools_11.1.0-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/perl_5.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/python3-inflect_7.5.0-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t732qyw/xz-utils_5.8.3-1_i386.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpevub59u9/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: i386 is different from amd64 but can be executed natively I: using /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt 127.0.0.1 - - [26/Sep/2026 01:14:38] code 404, message File not found 127.0.0.1 - - [26/Sep/2026 01:14:38] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:44431 ./ InRelease 127.0.0.1 - - [26/Sep/2026 01:14:38] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:44431 ./ Release [462 B] 127.0.0.1 - - [26/Sep/2026 01:14:38] code 404, message File not found 127.0.0.1 - - [26/Sep/2026 01:14:38] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:44431 ./ Release.gpg 127.0.0.1 - - [26/Sep/2026 01:14:38] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:44431 ./ Packages [224 kB] Fetched 224 kB in 0s (12.0 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./libsmartcols1_2.42.3-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./libudev1_262%7erc1-2_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./libuuid1_2.42.3-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./util-linux_2.42.3-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./libdebconfclient0_0.283_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./base-passwd_3.6.8_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./init-system-helpers_1.69%2bnmu1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./libc-bin_2.43-4_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./ncurses-base_6.6%2b20260608-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:39] "GET /./sysvinit-utils_3.18-1_i386.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt 127.0.0.1 - - [26/Sep/2026 01:14:40] code 404, message File not found 127.0.0.1 - - [26/Sep/2026 01:14:40] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:44431 ./ InRelease 127.0.0.1 - - [26/Sep/2026 01:14:40] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:44431 ./ Release 127.0.0.1 - - [26/Sep/2026 01:14:40] code 404, message File not found 127.0.0.1 - - [26/Sep/2026 01:14:40] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:44431 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./libexpat1_2.8.4-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./libpython3.14-minimal_3.14.7-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./python3.14-minimal_3.14.7-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./python3-minimal_3.14.7-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./netbase_6.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./tzdata_2026c-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:14:56] "GET /./libffi8_3.8.0-2_i386.deb HTTP/1.1" 200 - 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127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3-all_3.14.7-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3.14-dev_3.14.7-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3-dev_3.14.7-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3-all-dev_3.14.7-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./swig_4.5.0-3_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3-pkg-resources_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./python3-setuptools_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./dh-exec_0.31_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./libsimde-dev_0.8.4%7erc3-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Sep/2026 01:15:00] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpevub59u9/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt Reading package lists... Building dependency tree... Reading state information... base-passwd is already the newest version (3.6.8). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). build-essential is already the newest version (12.12). build-essential set to manually installed. base-files is already the newest version (14.2). bsdextrautils is already the newest version (2.42.3-1). bsdextrautils set to manually installed. liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. libbinutils is already the newest version (2.47-2). libbinutils set to manually installed. libcrypt1 is already the newest version (1:4.5.2+20251210-1). liblzma5 is already the newest version (5.8.3-1). libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). gzip is already the newest version (1.14-1). cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libgcc-16-dev is already the newest version (16.2.0-2). libgcc-16-dev set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b2). binutils-i686-linux-gnu is already the newest version (2.47-2). binutils-i686-linux-gnu set to manually installed. libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. libffi8 is already the newest version (3.8.0-2). libffi8 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. binutils is already the newest version (2.47-2). binutils set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libboost1.90-dev is already the newest version (1.90.0-6.1+b1). libboost1.90-dev set to manually installed. libcc1-0 is already the newest version (16.2.0-2). libcc1-0 set to manually installed. groff-base is already the newest version (1.24.1-1). groff-base set to manually installed. libcap-ng0 is already the newest version (0.9.5-1). libaudit1 is already the newest version (1:4.1.2-1+b1). findutils is already the newest version (4.11.0-2). libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. libc-bin is already the newest version (2.43-4). libatomic1 is already the newest version (16.2.0-2). libatomic1 set to manually installed. architecture-properties is already the newest version (0.2.6+b2). architecture-properties set to manually installed. gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. gcc-16 is already the newest version (16.2.0-2). gcc-16 set to manually installed. libblkid1 is already the newest version (2.42.3-1). coreutils is already the newest version (9.10-1). gcc-16-base is already the newest version (16.2.0-2). bash is already the newest version (5.3-3+b1). intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. dpkg is already the newest version (1.23.7). dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. libgfortran5 is already the newest version (16.2.0-2). libgfortran5 set to manually installed. gettext-base is already the newest version (1.0-3). gettext-base set to manually installed. libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. libacl1 is already the newest version (2.4.0-1). file is already the newest version (1:5.47-4). file set to manually installed. libexpat1-dev is already the newest version (2.8.4-1). libexpat1-dev set to manually installed. cpp-i686-linux-gnu is already the newest version (4:16.1.0-3). cpp-i686-linux-gnu set to manually installed. libc-dev-bin is already the newest version (2.43-4). libc-dev-bin set to manually installed. gcc-16-i686-linux-gnu is already the newest version (16.2.0-2). gcc-16-i686-linux-gnu set to manually installed. libc-gconv-modules-extra is already the newest version (2.43-4). autoconf is already the newest version (2.73-2). autoconf set to manually installed. g++-16 is already the newest version (16.2.0-2). g++-16 set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. libjs-sphinxdoc is already the newest version (9.1.0-7). libjs-sphinxdoc set to manually installed. libdebconfclient0 is already the newest version (0.283). libc6 is already the newest version (2.43-4). gettext is already the newest version (1.0-3). gettext set to manually installed. libmount1 is already the newest version (2.42.3-1). diffutils is already the newest version (1:3.12-1). debianutils is already the newest version (5.24). libgcc-s1 is already the newest version (16.2.0-2). libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. autopoint is already the newest version (1.0-3). autopoint set to manually installed. dash is already the newest version (0.5.12-12). dh-python is already the newest version (7.20260623). dh-python set to manually installed. bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. libattr1 is already the newest version (1:2.6.0-1). libgprofng0 is already the newest version (2.47-2). libgprofng0 set to manually installed. libctf0 is already the newest version (2.47-2). libctf0 set to manually installed. libitm1 is already the newest version (16.2.0-2). libitm1 set to manually installed. libmd0 is already the newest version (1.2.0-2). debhelper is already the newest version (14.3). debhelper set to manually installed. libdebhelper-perl is already the newest version (14.3). libdebhelper-perl set to manually installed. binutils-common is already the newest version (2.47-2). binutils-common set to manually installed. cpp-16 is already the newest version (16.2.0-2). cpp-16 set to manually installed. dwz is already the newest version (0.17-1). dwz set to manually installed. debconf is already the newest version (1.5.92). grep is already the newest version (3.12-1). init-system-helpers is already the newest version (1.69+nmu1). g++-i686-linux-gnu is already the newest version (4:16.1.0-3). g++-i686-linux-gnu set to manually installed. g++-16-i686-linux-gnu is already the newest version (16.2.0-2). g++-16-i686-linux-gnu set to manually installed. cpp-16-i686-linux-gnu is already the newest version (16.2.0-2). cpp-16-i686-linux-gnu set to manually installed. libelf1t64 is already the newest version (0.196-1). libelf1t64 set to manually installed. gcc-i686-linux-gnu is already the newest version (4:16.1.0-3). gcc-i686-linux-gnu set to manually installed. hostname is already the newest version (3.25). libgomp1 is already the newest version (16.2.0-2). libgomp1 set to manually installed. libboost-dev is already the newest version (1.90.0.2+nmu1). libboost-dev set to manually installed. libexpat1 is already the newest version (2.8.4-1). libexpat1 set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. automake is already the newest version (1:1.18.1-4). automake set to manually installed. libctf-nobfd0 is already the newest version (2.47-2). libctf-nobfd0 set to manually installed. libc6-dev is already the newest version (2.43-4). libc6-dev set to manually installed. libasan8 is already the newest version (16.2.0-2). libasan8 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libpython3-all-dev is already the newest version (3.14.7-3). libpython3-all-dev set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libsmartcols1 is already the newest version (2.42.3-1). python3.14 is already the newest version (3.14.7-1). python3.14 set to manually installed. python3-dev is already the newest version (3.14.7-3). python3-dev set to manually installed. python3-numpy is already the newest version (1:2.4.6+ds-4). python3-numpy set to manually installed. libpam-modules-bin is already the newest version (1.7.0-8). libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. python3 is already the newest version (3.14.7-3). python3 set to manually installed. swig is already the newest version (4.5.0-3). swig set to manually installed. libstdc++-16-dev is already the newest version (16.2.0-2). libstdc++-16-dev set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). python3.14-minimal is already the newest version (3.14.7-1). python3.14-minimal set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. libpcre2-8-0 is already the newest version (10.48-2). libpam-modules is already the newest version (1.7.0-8). netbase is already the newest version (6.6). netbase set to manually installed. libsframe3 is already the newest version (2.47-2). libsframe3 set to manually installed. util-linux is already the newest version (2.42.3-1). perl-modules-5.42 is already the newest version (5.42.3-1). perl-modules-5.42 set to manually installed. python3-all is already the newest version (3.14.7-3). python3-all set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libtool is already the newest version (2.6.2-2). libtool set to manually installed. libpython3.14-dev is already the newest version (3.14.7-1). libpython3.14-dev set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. linux-libc-dev is already the newest version (7.1.12-1). linux-libc-dev set to manually installed. tzdata is already the newest version (2026c-1). tzdata set to manually installed. libquadmath0 is already the newest version (16.2.0-2). libquadmath0 set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). libpython3.14-minimal is already the newest version (3.14.7-1). libpython3.14-minimal set to manually installed. python3-all-dev is already the newest version (3.14.7-3). python3-all-dev set to manually installed. ncurses-bin is already the newest version (6.6+20260608-2). python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. libxml2-16 is already the newest version (2.15.3+dfsg-1+b1). libxml2-16 set to manually installed. libsqlite3-0 is already the newest version (3.53.4-2). libsqlite3-0 set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. libpython3-stdlib is already the newest version (3.14.7-3). libpython3-stdlib set to manually installed. sysvinit-utils is already the newest version (3.18-1). ncurses-base is already the newest version (6.6+20260608-2). libselinux1 is already the newest version (3.11-2). libpython3.14-stdlib is already the newest version (3.14.7-1). libpython3.14-stdlib set to manually installed. tar is already the newest version (1.35+dfsg-5). python3-numpy-dev is already the newest version (1:2.4.6+ds-4). python3-numpy-dev set to manually installed. libubsan1 is already the newest version (16.2.0-2). libubsan1 set to manually installed. python3.14-dev is already the newest version (3.14.7-1). python3.14-dev set to manually installed. libpam-runtime is already the newest version (1.7.0-8). perl-base is already the newest version (5.42.3-1). libperl5.42 is already the newest version (5.42.3-1). libperl5.42 set to manually installed. python3-setuptools is already the newest version (80.9.0-2). python3-setuptools set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. python3-minimal is already the newest version (3.14.7-3). python3-minimal set to manually installed. libpython3.14 is already the newest version (3.14.7-1). libpython3.14 set to manually installed. sed is already the newest version (4.9-3). python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. libudev1 is already the newest version (262~rc1-2). libsystemd0 is already the newest version (262~rc1-2). python3-pkg-resources is already the newest version (80.9.0-2). python3-pkg-resources set to manually installed. python3-typeguard is already the newest version (4.4.4-3). python3-typeguard set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-4). libuuid1 is already the newest version (2.42.3-1). libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. libssl3t64 is already the newest version (3.6.4-1). man-db is already the newest version (2.13.1-1). man-db set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. python3-typing-extensions is already the newest version (4.16.0-5). python3-typing-extensions set to manually installed. libstdc++6 is already the newest version (16.2.0-2). libstdc++6 set to manually installed. libsimde-dev is already the newest version (0.8.4~rc3-5). libsimde-dev set to manually installed. openssl-provider-legacy is already the newest version (3.6.4-1). libpam0g is already the newest version (1.7.0-8). libseccomp2 is already the newest version (2.6.1-1). libseccomp2 set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. libpython3-dev is already the newest version (3.14.7-3). libpython3-dev set to manually installed. python3-more-itertools is already the newest version (11.1.0-2). python3-more-itertools set to manually installed. perl is already the newest version (5.42.3-1). perl set to manually installed. python3-inflect is already the newest version (7.5.0-2). python3-inflect set to manually installed. xz-utils is already the newest version (5.8.3-1). xz-utils set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt (Reading database ... 35972 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.ihaLSh2gOt... I: success in 127.7505 seconds Downloading packages 1to 100 out of 185 Downloading packages 101to 185 out of 185 env --chdir=/srv/rebuilderd/tmp/rebuilderdGCP2kN/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767942232 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildQLY3Bb/debrebuild.sbuildrc.w2Bf_g3qrc_L sbuild --build=i386 --host=i386 --arch-any --no-arch-all --binNMU-changelog= consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for i386; no source changes. * Rebuild without Python 3.13 -- all / amd64 / i386 Build Daemon (x86-conova-01) Fri, 09 Jan 2026 07:03:52 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildQLY3Bb/debrebuild.tar.TcEVeZXU0u7I --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on infom08-amd64 +==============================================================================+ | consensuscore 1.1.1+dfsg-9+b2 (i386) Sat, 26 Sep 2026 01:16:47 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-9+b2 Source Version: 1.1.1+dfsg-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildQLY3Bb/debrebuild.tar.TcEVeZXU0u7I to /srv/rebuilderd/tmp/tmp.sbuild.B55d5uNmoj... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 26 Sep 2026 01:16:54 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9.dsc exists in /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 26 Sep 2026 01:16:55 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-v3EaUM/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 26 Sep 2026 01:16:58 +0000 | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment Sat, 26 Sep 2026 01:16:59 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.107+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.107-1 (2026-08-29) amd64 (x86_64) Toolchain package versions: binutils_2.47-2 dpkg-dev_1.23.7 g++-16_16.2.0-2 gcc-16_16.2.0-2 libc6-dev_2.43-4 libstdc++-16-dev_16.2.0-2 libstdc++6_16.2.0-2 linux-libc-dev_7.1.12-1 Package versions: architecture-properties_0.2.6+b2 autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-3 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3+b1 binutils_2.47-2 binutils-common_2.47-2 binutils-i686-linux-gnu_2.47-2 bsdextrautils_2.42.3-1 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-2 cpp-16-i686-linux-gnu_16.2.0-2 cpp-i686-linux-gnu_4:16.1.0-3 dash_0.5.12-12 debconf_1.5.92 debhelper_14.3 debianutils_5.24 dh-autoreconf_22 dh-exec_0.31 dh-python_7.20260623 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-2 g++_4:16.1.0-3 g++-16_16.2.0-2 g++-16-i686-linux-gnu_16.2.0-2 g++-i686-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-2 gcc-16-base_16.2.0-2 gcc-16-i686-linux-gnu_16.2.0-2 gcc-i686-linux-gnu_4:16.1.0-3 gettext_1.0-3 gettext-base_1.0-3 grep_3.12-1 groff-base_1.24.1-1 gzip_1.14-1 hostname_3.25 init-system-helpers_1.69+nmu1 intltool-debian_0.35.0+20060710.6 libacl1_2.4.0-1 libarchive-zip-perl_1.68-1 libasan8_16.2.0-2 libatomic1_16.2.0-2 libattr1_1:2.6.0-1 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.47-2 libblas3_3.12.1-8 libblkid1_2.42.3-1 libboost-dev_1.90.0.2+nmu1 libboost1.90-dev_1.90.0-6.1+b1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.43-4 libc-dev-bin_2.43-4 libc-gconv-modules-extra_2.43-4 libc6_2.43-4 libc6-dev_2.43-4 libcap-ng0_0.9.5-1 libcc1-0_16.2.0-2 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47-2 libctf0_2.47-2 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.3 libdpkg-perl_1.23.7 libelf1t64_0.196-1 libexpat1_2.8.4-1 libexpat1-dev_2.8.4-1 libffi8_3.8.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-16-dev_16.2.0-2 libgcc-s1_16.2.0-2 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran5_16.2.0-2 libgmp10_2:6.3.0+dfsg-5+b2 libgomp1_16.2.0-2 libgprofng0_2.47-2 libisl23_0.28-1 libitm1_16.2.0-2 libjansson4_2.15.1-1 libjs-sphinxdoc_9.1.0-7 liblapack3_3.12.1-8 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libmount1_2.42.3-1 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+------------------------------------------------------------------------------+ | Build Sat, 26 Sep 2026 01:16:59 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit [!i386], architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz ac12995d4ce310fb671f720f1229e09aef7f26c2 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 949772e680d176bd186c5326388ebdcf 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmlgqxwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBp7ZhAAvUnjkG3krPpq/gREqdP+b35fjw3OJN8w e0Y94gfMgaqrEBcSAtHOKjMkJQ5GchDLdu88C6OAO2OyIV58rDXaWHYq8YU5RmVK 57GZKb/B4viGxZXtcwyMPz4abCD92wk0FFvQR0h+uFpcAttSM3PF2zdzghFWyu0G 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dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 1.1.1+dfsg-9+b2 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767942232 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-9+b2 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by all / amd64 / i386 Build Daemon (x86-conova-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o src/C++/Align/PairwiseAlignment.cpp: In function ‘std::vector ConsensusCore::TargetToQueryPositions(const std::string&)’: src/C++/Align/PairwiseAlignment.cpp:198:9: warning: variable ‘targetPos’ set but not used [-Wunused-but-set-variable=] 198 | int targetPos = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::DenseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:221:16: required from here 221 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:222:16: required from here 222 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:223:16: required from here 223 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::EdnaEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:224:16: required from here 224 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind.hpp:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (1 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (0 ms) [----------] 4 tests from MutationEnumerationTest (1 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (69 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (66 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (81 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (51 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (3 ms) [----------] 5 tests from QvEvaluatorTest (270 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (0 ms total) [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (0 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (2 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (2 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (0 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (5 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (5 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (0 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (0 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (1 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (0 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (2 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (2 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (0 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/1 (2 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (3 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/2 (3 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (2 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (0 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (3 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (19 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (21 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (22 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (17 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (18 ms) [----------] 5 tests from RecursorFuzzTest/0 (98 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (57 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (57 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (60 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (18 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (18 ms) [----------] 5 tests from RecursorFuzzTest/1 (210 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (51 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (53 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (64 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (16 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (16 ms) [----------] 5 tests from RecursorFuzzTest/2 (200 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (68 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (70 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (70 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (15 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (16 ms) [----------] 5 tests from RecursorFuzzTest/3 (239 ms total) [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (1 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (1 ms total) [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (0 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (0 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (0 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (1 ms) [----------] 4 tests from PoaGraph (1 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (0 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (0 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (0 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (0 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (5 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (0 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (522 ms) [----------] 8 tests from PoaConsensus (527 ms total) [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (0 ms) [----------] 3 tests from PairwiseAlignmentTests (0 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (24 ms) [----------] 2 tests from AffineAlignmentTests (24 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (0 ms) [----------] 1 test from LinearAlignmentTests (0 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (0 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/0 (3 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (0 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/1 (2 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/2 (2 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (1 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/3 (3 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (0 ms) [----------] 1 test from QuiverConfigTableTests (0 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (0 ms) [----------] 3 tests from MutationOrientationTests (0 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (1 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (0 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (1 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (0 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (4 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (1602 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:507: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-i386-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68. dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-9+b2_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-09-26T01:21:22Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 26 Sep 2026 01:21:22 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-9+b2_i386.changes: ------------------------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 07:03:52 +0000 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Binary-Only: yes Architecture: i386 Version: 1.1.1+dfsg-9+b2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: all / amd64 / i386 Build Daemon (x86-conova-01) Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for i386; no source changes. * Rebuild without Python 3.13 Checksums-Sha1: ad4e91daa195312f12812284c1a3f1dd086255ba 6925 consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo f9836c9045e8ed9ee73e99f01a049057a6f01c3d 516920 libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb 32594340b1136026e5697b298b74d799294e30b0 9055776 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 2cbf365278004990e649bcb56b08cf3e81aaa7db 731452 python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb Checksums-Sha256: d7cd053d71566a8ac98299afa21df2b5e91e086749c7c658bce1f12ce6ecb1e4 6925 consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo 79995ab6b3b9942cf40fa5b7a6e0acccd5b625d47e7187f5d87503d22ab97370 516920 libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb c377f7a09667e0bf35c426a8debcfbe492d80886a6659e444484cadf3ce02991 9055776 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 5f4ca19b29daae30b15374901f7b596658807af57ca27c7f65a70c06ecdfff93 731452 python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb Files: 0ce8e298d35197c714650a3dd9672634 6925 science optional consensuscore_1.1.1+dfsg-9+b2_i386.buildinfo 07723b9148501d23f248fe418623f45d 516920 libdevel optional libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb e9c53559cc861965cbcfba9c5588bb46 9055776 debug optional python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 47a71583553465fbdb2f321052ea499c 731452 python optional python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb +------------------------------------------------------------------------------+ | Buildinfo Sat, 26 Sep 2026 01:21:23 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Architecture: i386 Version: 1.1.1+dfsg-9+b2 Binary-Only-Changes: consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for i386; no source changes. * Rebuild without Python 3.13 . -- all / amd64 / i386 Build Daemon (x86-conova-01) Fri, 09 Jan 2026 07:03:52 +0000 Checksums-Md5: 07723b9148501d23f248fe418623f45d 516920 libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb e9c53559cc861965cbcfba9c5588bb46 9055776 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 47a71583553465fbdb2f321052ea499c 731452 python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb Checksums-Sha1: f9836c9045e8ed9ee73e99f01a049057a6f01c3d 516920 libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb 32594340b1136026e5697b298b74d799294e30b0 9055776 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 2cbf365278004990e649bcb56b08cf3e81aaa7db 731452 python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb Checksums-Sha256: 79995ab6b3b9942cf40fa5b7a6e0acccd5b625d47e7187f5d87503d22ab97370 516920 libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb c377f7a09667e0bf35c426a8debcfbe492d80886a6659e444484cadf3ce02991 9055776 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb 5f4ca19b29daae30b15374901f7b596658807af57ca27c7f65a70c06ecdfff93 731452 python3-pbconsensuscore_1.1.1+dfsg-9+b2_i386.deb Build-Origin: Debian Build-Architecture: i386 Build-Date: Sat, 26 Sep 2026 01:21:21 +0000 Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg Installed-Build-Depends: architecture-properties (= 0.2.6+b2), autoconf (= 2.73-2), automake (= 1:1.18.1-4), autopoint (= 1.0-3), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-3+b1), binutils (= 2.47-2), binutils-common (= 2.47-2), binutils-i686-linux-gnu (= 2.47-2), bsdextrautils (= 2.42.3-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-16 (= 16.2.0-2), cpp-16-i686-linux-gnu (= 16.2.0-2), cpp-i686-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 14.3), debianutils (= 5.24), dh-autoreconf (= 22), dh-exec (= 0.31), dh-python (= 7.20260623), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.11.0-2), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-2), g++-16-i686-linux-gnu (= 16.2.0-2), g++-i686-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-16 (= 16.2.0-2), gcc-16-base (= 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DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1767942232" +------------------------------------------------------------------------------+ | Package contents Sat, 26 Sep 2026 01:21:23 +0000 | +------------------------------------------------------------------------------+ libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb --------------------------------------------- new Debian package, version 2.0. size 516920 bytes: control archive=2216 bytes. 768 bytes, 18 lines control 4413 bytes, 54 lines md5sums Package: libconsensuscore-dev Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b2 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 3056 Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the header files and static library. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/ drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/ -rw-r--r-- root/root 1214 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AffineAlignment.hpp -rw-r--r-- root/root 775 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AlignConfig.hpp -rw-r--r-- root/root 565 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/LinearAlignment.hpp -rw-r--r-- root/root 1956 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/PairwiseAlignment.hpp -rw-r--r-- root/root 196 2018-08-14 14:23 ./usr/include/ConsensusCore/Checksum.hpp -rw-r--r-- root/root 653 2018-08-14 14:23 ./usr/include/ConsensusCore/Coverage.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Edna/ -rw-r--r-- root/root 792 2018-08-14 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2018-08-14 14:23 ./usr/share/doc/libconsensuscore-dev/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/libconsensuscore-dev/copyright python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_i386.deb ------------------------------------------------------- new Debian package, version 2.0. size 9055776 bytes: control archive=564 bytes. 455 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: python3-pbconsensuscore-dbgsym Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b2 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 9253 Depends: python3-pbconsensuscore (= 1.1.1+dfsg-9+b2) Section: debug Priority: optional Description: debug symbols for python3-pbconsensuscore Build-Ids: bd69c8ff53d49d1d6411d8bfbf28e02076640013 drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 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(<< 3.15), python3 (>= 3.14~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.29), libgcc-s1 (>= 3.4), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the Python3 bindings. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/ -rw-r--r-- root/root 2354 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/PKG-INFO -rw-r--r-- root/root 1 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/dependency_links.txt -rw-r--r-- root/root 15 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/top_level.txt -rw-r--r-- root/root 442 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore.py -rw-r--r-- root/root 3159512 2026-01-09 07:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-314-i386-linux-gnu.so drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/ -rw-r--r-- root/root 821 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.gz -rw-r--r-- root/root 239 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.i386.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/python3-pbconsensuscore/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/python3-pbconsensuscore/copyright +------------------------------------------------------------------------------+ | Post Build Sat, 26 Sep 2026 01:21:24 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 26 Sep 2026 01:21:24 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 26 Sep 2026 01:21:26 +0000 | +------------------------------------------------------------------------------+ Build Architecture: i386 Build Type: any Build-Space: 194080 Build-Time: 261 Distribution: unstable Host Architecture: i386 Install-Time: 3 Job: /srv/rebuilderd/tmp/rebuilderdGCP2kN/inputs/consensuscore_1.1.1+dfsg-9.dsc Machine Architecture: amd64 Package: consensuscore Package-Time: 275 Source-Version: 1.1.1+dfsg-9 Space: 194080 Status: successful Version: 1.1.1+dfsg-9+b2 -------------------------------------------------------------------------------- Finished at 2026-09-26T01:21:22Z Build needed 00:04:35, 194080k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdGCP2kN/out checking libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb: size differs for libconsensuscore-dev_1.1.1+dfsg-9+b2_i386.deb