=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs/consensuscore_1.1.1+dfsg-9+b3_i386.buildinfo Source: consensuscore Version: 1.1.1+dfsg-9 rebuilderd-worker node: infom07-amd64 +------------------------------------------------------------------------------+ | Downloading sources Wed, 28 Oct 2026 05:03:48 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.7 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [239 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [820 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [148 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3436 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [335 kB] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7980 B] Get:18 https://deb.debian.org/debian forky/main Sources [11.4 MB] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [10.7 kB] Get:20 https://deb.debian.org/debian sid/main Sources [12.1 MB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Get:22 https://deb.debian.org/debian experimental/main Sources [364 kB] Fetched 35.9 MB in 32s (1131 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.dsc' consensuscore_1.1.1+dfsg-9.dsc 2374 SHA256:a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.debian.tar.xz' consensuscore_1.1.1+dfsg-9.debian.tar.xz 10340 SHA256:4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e consensuscore_1.1.1+dfsg-9.debian.tar.xz a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf consensuscore_1.1.1+dfsg-9.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Wed, 28 Oct 2026 05:04:21 +0000 | +------------------------------------------------------------------------------+ + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdsMCmAl/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs/consensuscore_1.1.1+dfsg-9+b3_i386.buildinfo Rebuilding consensuscore=1.1.1+dfsg-9 in /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs now. /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs/consensuscore_1.1.1+dfsg-9+b3_i386.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20261027T083111Z forky InRelease [151 kB] Get:3 http://deb.debian.org/debian unstable/main i386 Packages [10.5 MB] Get:4 http://snapshot.debian.org/archive/debian/20261027T083111Z forky/main i386 Packages [9760 kB] Fetched 20.6 MB in 2s (10.5 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20261027T083111Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main i386 libacl1 i386 2.4.0-1 [38.6 kB] Get:2 http://deb.debian.org/debian unstable/main i386 architecture-properties i386 0.2.6+b2 [2632 B] Get:3 http://deb.debian.org/debian unstable/main i386 libattr1 i386 1:2.6.0-1 [25.2 kB] Get:4 http://deb.debian.org/debian unstable/main i386 libaudit-common all 1:4.2.1-1 [13.3 kB] Get:5 http://deb.debian.org/debian unstable/main i386 libaudit1 i386 1:4.2.1-1 [58.5 kB] Get:6 http://deb.debian.org/debian unstable/main i386 autoconf all 2.73-2 [516 kB] Get:7 http://deb.debian.org/debian unstable/main i386 automake all 1:1.19-3 [892 kB] Get:8 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:9 http://deb.debian.org/debian unstable/main i386 base-files i386 14.2 [87.9 kB] Get:10 http://deb.debian.org/debian unstable/main i386 base-passwd i386 3.6.8 [55.1 kB] Get:11 http://deb.debian.org/debian unstable/main i386 bash i386 5.3-4 [1614 kB] Get:12 http://deb.debian.org/debian unstable/main i386 binutils i386 2.47.50.20261021-1 [294 kB] Get:13 http://deb.debian.org/debian unstable/main i386 binutils-common i386 2.47.50.20261021-1 [2687 kB] Get:14 http://deb.debian.org/debian unstable/main i386 binutils-i686-linux-gnu i386 2.47.50.20261021-1 [1188 kB] Get:15 http://deb.debian.org/debian unstable/main i386 libbinutils i386 2.47.50.20261021-1 [607 kB] Get:16 http://deb.debian.org/debian unstable/main i386 libctf-nobfd0 i386 2.47.50.20261021-1 [166 kB] Get:17 http://deb.debian.org/debian unstable/main i386 libctf0 i386 2.47.50.20261021-1 [101 kB] Get:18 http://deb.debian.org/debian unstable/main i386 libgprofng0 i386 2.47.50.20261021-1 [883 kB] Get:19 http://deb.debian.org/debian unstable/main i386 libboost-dev i386 1.92.0.1 [3260 B] Get:20 http://deb.debian.org/debian unstable/main i386 libboost-regex1.92-dev i386 1.92.0-4+b1 [337 kB] Get:21 http://deb.debian.org/debian unstable/main i386 libboost-regex1.92.0 i386 1.92.0-4+b1 [317 kB] Get:22 http://deb.debian.org/debian unstable/main i386 libboost1.92-dev i386 1.92.0-4+b1 [11.6 MB] Get:23 http://deb.debian.org/debian unstable/main i386 build-essential i386 12.12 [4620 B] Get:24 http://deb.debian.org/debian unstable/main i386 bzip2 i386 1.0.8-6+b2 [40.6 kB] Get:25 http://deb.debian.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-6+b2 [37.5 kB] Get:26 http://deb.debian.org/debian unstable/main i386 libdebconfclient0 i386 0.283 [7596 B] Get:27 http://deb.debian.org/debian unstable/main i386 coreutils i386 9.10-1 [3183 kB] Get:28 http://deb.debian.org/debian unstable/main i386 dash i386 0.5.12-12 [103 kB] Get:29 http://deb.debian.org/debian unstable/main i386 libdb5.3t64 i386 5.3.28+dfsg2-11+b1 [767 kB] Get:30 http://deb.debian.org/debian unstable/main i386 debconf all 1.5.92 [123 kB] Get:31 http://deb.debian.org/debian unstable/main i386 debhelper all 14.5 [944 kB] Get:32 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 14.5 [77.7 kB] Get:33 http://deb.debian.org/debian unstable/main i386 debianutils i386 5.24 [94.0 kB] Get:34 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 23 [12.7 kB] Get:35 http://deb.debian.org/debian unstable/main i386 dh-exec i386 0.31 [26.4 kB] Get:36 http://deb.debian.org/debian unstable/main i386 dh-python all 7.20261025 [115 kB] Get:37 http://deb.debian.org/debian unstable/main i386 diffutils i386 1:3.12-1 [413 kB] Get:38 http://deb.debian.org/debian unstable/main i386 dpkg i386 1.23.11 [1239 kB] Get:39 http://deb.debian.org/debian unstable/main i386 dpkg-dev all 1.23.11 [1005 kB] Get:40 http://deb.debian.org/debian unstable/main i386 libdpkg-perl all 1.23.11 [650 kB] Get:41 http://deb.debian.org/debian unstable/main i386 dwz i386 0.17-1 [115 kB] Get:42 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.196-1 [68.1 kB] Get:43 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.9.0-1 [136 kB] Get:44 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.9.0-1 [198 kB] Get:45 http://deb.debian.org/debian unstable/main i386 file i386 1:5.47-4 [43.1 kB] Get:46 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.47-4 [345 kB] Get:47 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.47-4 [118 kB] Get:48 http://deb.debian.org/debian unstable/main i386 findutils i386 4.11.0-3 [800 kB] Get:49 http://deb.debian.org/debian unstable/main i386 cpp-16 i386 16.2.0-4 [1276 B] Get:50 http://deb.debian.org/debian unstable/main i386 cpp-16-i686-linux-gnu i386 16.2.0-4 [14.0 MB] Get:51 http://deb.debian.org/debian unstable/main i386 g++-16 i386 16.2.0-4 [36.4 kB] Get:52 http://deb.debian.org/debian unstable/main i386 g++-16-i686-linux-gnu i386 16.2.0-4 [15.3 MB] Get:53 http://deb.debian.org/debian unstable/main i386 gcc-16 i386 16.2.0-4 [541 kB] Get:54 http://deb.debian.org/debian unstable/main i386 gcc-16-base i386 16.2.0-4 [39.3 kB] Get:55 http://deb.debian.org/debian unstable/main i386 gcc-16-i686-linux-gnu i386 16.2.0-4 [27.4 MB] Get:56 http://deb.debian.org/debian unstable/main i386 libasan8 i386 16.2.0-4 [2734 kB] Get:57 http://deb.debian.org/debian unstable/main i386 libatomic1 i386 16.2.0-4 [8140 B] Get:58 http://deb.debian.org/debian unstable/main i386 libcc1-0 i386 16.2.0-4 [46.4 kB] Get:59 http://deb.debian.org/debian unstable/main i386 libgcc-16-dev i386 16.2.0-4 [2663 kB] Get:60 http://deb.debian.org/debian unstable/main i386 libgcc-s1 i386 16.2.0-4 [87.7 kB] Get:61 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 16.2.0-4 [754 kB] Get:62 http://deb.debian.org/debian unstable/main i386 libgomp1 i386 16.2.0-4 [153 kB] Get:63 http://deb.debian.org/debian unstable/main i386 libitm1 i386 16.2.0-4 [28.9 kB] Get:64 http://deb.debian.org/debian unstable/main i386 cpp i386 4:16.1.0-3 [1560 B] Get:65 http://deb.debian.org/debian unstable/main i386 cpp-i686-linux-gnu i386 4:16.1.0-3 [4460 B] Get:66 http://deb.debian.org/debian unstable/main i386 g++ i386 4:16.1.0-3 [1340 B] Get:67 http://deb.debian.org/debian unstable/main i386 g++-i686-linux-gnu i386 4:16.1.0-3 [1192 B] Get:68 http://deb.debian.org/debian unstable/main i386 gcc i386 4:16.1.0-3 [5140 B] Get:69 http://deb.debian.org/debian unstable/main i386 gcc-i686-linux-gnu i386 4:16.1.0-3 [1428 B] Get:70 http://deb.debian.org/debian unstable/main i386 libgdbm-compat4t64 i386 1.26-1+b2 [52.6 kB] Get:71 http://deb.debian.org/debian unstable/main i386 libgdbm6t64 i386 1.26-1+b2 [83.3 kB] Get:72 http://deb.debian.org/debian unstable/main i386 autopoint all 1.0-5 [820 kB] Get:73 http://deb.debian.org/debian unstable/main i386 gettext i386 1.0-5 [2725 kB] Get:74 http://deb.debian.org/debian unstable/main i386 gettext-base i386 1.0-5 [334 kB] Get:75 http://deb.debian.org/debian unstable/main i386 libc-bin i386 2.43-7 [644 kB] Get:76 http://deb.debian.org/debian unstable/main i386 libc-dev-bin i386 2.43-7 [39.7 kB] Get:77 http://deb.debian.org/debian unstable/main i386 libc-gconv-modules-extra i386 2.43-7 [1093 kB] Get:78 http://deb.debian.org/debian unstable/main i386 libc6 i386 2.43-7 [1738 kB] Get:79 http://deb.debian.org/debian unstable/main i386 libc6-dev i386 2.43-7 [1886 kB] Get:80 http://deb.debian.org/debian unstable/main i386 libgmp10 i386 2:6.3.0+dfsg-5+b2 [570 kB] Get:81 http://deb.debian.org/debian unstable/main i386 grep i386 3.12-1 [451 kB] Get:82 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.24.2-2 [1378 kB] Get:83 http://deb.debian.org/debian unstable/main i386 gzip i386 1.14-1 [149 kB] Get:84 http://deb.debian.org/debian unstable/main i386 hostname i386 3.25 [11.3 kB] Get:85 http://deb.debian.org/debian unstable/main i386 init-system-helpers all 1.69+nmu3 [37.3 kB] Get:86 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:87 http://deb.debian.org/debian unstable/main i386 libisl23 i386 0.28-1 [756 kB] Get:88 http://deb.debian.org/debian unstable/main i386 libjansson4 i386 2.15.1-1 [69.5 kB] Get:89 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-8 [147 kB] Get:90 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-8 [2155 kB] Get:91 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get:92 http://deb.debian.org/debian unstable/main i386 libcap-ng0 i386 0.9.6-1+b1 [20.2 kB] Get:93 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.8.0-2 [27.7 kB] Get:94 http://deb.debian.org/debian unstable/main i386 libcrypt1 i386 1:4.5.2+20251210-1 [103 kB] Get:95 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 9.2.0-1 [46.8 kB] Get:96 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:97 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:98 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.42.4-1 [107 kB] Get:99 http://deb.debian.org/debian unstable/main i386 libblkid1 i386 2.42.4-1 [201 kB] Get:100 http://deb.debian.org/debian unstable/main i386 liblzma5 i386 5.8.4-1 [364 kB] Fetched 112 MB in 1s (83.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libisl23_0.28-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dpkg_1.23.11_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libjansson4_2.15.1-1_i386.deb' dpkg-name: info: moved 'libaudit-common_1%3a4.2.1-1_all.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libaudit-common_4.2.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/binutils-i686-linux-gnu_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/autopoint_1.0-5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/groff-base_1.24.2-2_i386.deb' dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libmagic-mgc_5.47-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgdbm-compat4t64_1.26-1+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libdebconfclient0_0.283_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gzip_1.14-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gcc-16-base_16.2.0-4_i386.deb' dpkg-name: info: moved 'cpp_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/cpp_16.1.0-3_i386.deb' dpkg-name: info: moved 'libcrypt1_1%3a4.5.2+20251210-1_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libcrypt1_4.5.2+20251210-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/grep_3.12-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/autoconf_2.73-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libc-dev-bin_2.43-7_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gettext-base_1.0-5_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/cpp-16-i686-linux-gnu_16.2.0-4_i386.deb' dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libmagic1t64_5.47-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/bash_5.3-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libbinutils_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/bzip2_1.0.8-6+b2_i386.deb' dpkg-name: info: moved 'file_1%3a5.47-4_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/file_5.47-4_i386.deb' dpkg-name: info: moved 'diffutils_1%3a3.12-1_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/diffutils_3.12-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libc6_2.43-7_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libacl1_2.4.0-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgfortran5_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libboost1.92-dev_1.92.0-4+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libctf-nobfd0_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/architecture-properties_0.2.6+b2_i386.deb' dpkg-name: info: moved 'libaudit1_1%3a4.2.1-1_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libaudit1_4.2.1-1_i386.deb' dpkg-name: info: moved 'gcc_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/gcc_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libjs-sphinxdoc_9.2.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libcap-ng0_0.9.6-1+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libc6-dev_2.43-7_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgomp1_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/binutils-common_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgcc-s1_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libatomic1_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/debhelper_14.5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libblkid1_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libboost-dev_1.92.0.1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/g++-16_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libc-gconv-modules-extra_2.43-7_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/bsdextrautils_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libasan8_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/findutils_4.11.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libboost-regex1.92.0_1.92.0-4+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/binutils_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgprofng0_2.47.50.20261021-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/coreutils_9.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libcc1-0_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dpkg-dev_1.23.11_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/g++-16-i686-linux-gnu_16.2.0-4_i386.deb' dpkg-name: info: moved 'g++-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/g++-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libdb5.3t64_5.3.28+dfsg2-11+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libboost-regex1.92-dev_1.92.0-4+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libdebhelper-perl_14.5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libelf1t64_0.196-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/init-system-helpers_1.69+nmu3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/autotools-dev_20240727.1+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dh-exec_0.31_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/build-essential_12.12_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libexpat1_2.9.0-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libblas3_3.12.1-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/liblapack3_3.12.1-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/debconf_1.5.92_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/base-passwd_3.6.8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libitm1_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/cpp-16_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dh-strip-nondeterminism_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/liblzma5_5.8.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libdpkg-perl_1.23.11_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dh-autoreconf_23_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dash_0.5.12-12_i386.deb' dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libattr1_2.6.0-1_i386.deb' dpkg-name: info: moved 'gcc-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/gcc-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: info: moved 'automake_1%3a1.19-3_all.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/automake_1.19-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dh-python_7.20261025_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/hostname_3.25_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libbz2-1.0_1.0.8-6+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libctf0_2.47.50.20261021-1_i386.deb' dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/libgmp10_6.3.0+dfsg-5+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gettext_1.0-5_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libexpat1-dev_2.9.0-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libc-bin_2.43-7_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgcc-16-dev_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libgdbm6t64_1.26-1+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/debianutils_5.24_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/base-files_14.2_i386.deb' dpkg-name: info: moved 'g++_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/g++_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gcc-16_16.2.0-4_i386.deb' dpkg-name: info: moved 'cpp-i686-linux-gnu_4%3a16.1.0-3_i386.deb' to '/srv/rebuilderd/tmp/tmpfowj2qz9/cpp-i686-linux-gnu_16.1.0-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/gcc-16-i686-linux-gnu_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/dwz_0.17-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfowj2qz9/libffi8_3.8.0-2_i386.deb' Get:1 http://deb.debian.org/debian unstable/main i386 libsframe3 i386 2.47.50.20261021-1 [86.0 kB] Get:2 http://deb.debian.org/debian unstable/main i386 libquadmath0 i386 16.2.0-4 [230 kB] Get:3 http://deb.debian.org/debian unstable/main i386 libstdc++-16-dev i386 16.2.0-4 [2771 kB] Get:4 http://deb.debian.org/debian unstable/main i386 libstdc++6 i386 16.2.0-4 [856 kB] Get:5 http://deb.debian.org/debian unstable/main i386 libubsan1 i386 16.2.0-4 [1107 kB] Get:6 http://deb.debian.org/debian unstable/main i386 libmd0 i386 1.3.0-1 [48.5 kB] Get:7 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-3 [49.4 kB] Get:8 http://deb.debian.org/debian unstable/main i386 libseccomp2 i386 2.6.1-1+b2 [54.4 kB] Get:9 http://deb.debian.org/debian unstable/main i386 libselinux1 i386 3.11-2.1+b1 [95.5 kB] Get:10 http://deb.debian.org/debian unstable/main i386 libtool all 2.6.2-3 [552 kB] Get:11 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.4.2-1 [473 kB] Get:12 http://deb.debian.org/debian unstable/main i386 libxml2-16 i386 2.15.4+dfsg-1+b1 [704 kB] Get:13 http://deb.debian.org/debian unstable/main i386 libzstd1 i386 1.5.7+dfsg-4 [304 kB] Get:14 http://deb.debian.org/debian unstable/main i386 linux-libc-dev all 7.2.12-1 [2029 kB] Get:15 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.21-1 [335 kB] Get:16 http://deb.debian.org/debian unstable/main i386 make i386 4.4.1-3 [470 kB] Get:17 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.1-1 [1478 kB] Get:18 http://deb.debian.org/debian unstable/main i386 mawk i386 1.3.4.20260302-2 [148 kB] Get:19 http://deb.debian.org/debian unstable/main i386 media-types all 14.0.0 [30.8 kB] Get:20 http://deb.debian.org/debian unstable/main i386 libmpc3 i386 1.3.1-3 [59.6 kB] Get:21 http://deb.debian.org/debian unstable/main i386 libmpfr6 i386 4.2.2-3 [757 kB] Get:22 http://deb.debian.org/debian unstable/main i386 libncursesw6 i386 6.6+20260608-2 [148 kB] Get:23 http://deb.debian.org/debian unstable/main i386 libtinfo6 i386 6.6+20260608-2 [353 kB] Get:24 http://deb.debian.org/debian unstable/main i386 ncurses-base all 6.6+20260608-2 [276 kB] Get:25 http://deb.debian.org/debian unstable/main i386 ncurses-bin i386 6.6+20260608-2 [447 kB] Get:26 http://deb.debian.org/debian unstable/main i386 netbase all 6.6 [10.3 kB] Get:27 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.4.6+ds-5+b1 [6414 kB] Get:28 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.4.6+ds-5+b1 [146 kB] Get:29 http://deb.debian.org/debian unstable/main i386 libssl3t64 i386 3.6.5-1 [2567 kB] Get:30 http://deb.debian.org/debian unstable/main i386 openssl-provider-legacy i386 3.6.5-1 [325 kB] Get:31 http://deb.debian.org/debian unstable/main i386 libpam-modules i386 1.7.0-8 [182 kB] Get:32 http://deb.debian.org/debian unstable/main i386 libpam-modules-bin i386 1.7.0-8 [48.8 kB] Get:33 http://deb.debian.org/debian unstable/main i386 libpam-runtime all 1.7.0-8 [246 kB] Get:34 http://deb.debian.org/debian unstable/main i386 libpam0g i386 1.7.0-8 [69.8 kB] Get:35 http://deb.debian.org/debian unstable/main i386 patch i386 2.8.1-1 [144 kB] Get:36 http://deb.debian.org/debian unstable/main i386 libpcre2-8-0 i386 10.48-3.1 [308 kB] Get:37 http://deb.debian.org/debian unstable/main i386 libperl5.42 i386 5.42.3-1 [3895 kB] Get:38 http://deb.debian.org/debian unstable/main i386 perl i386 5.42.3-1 [266 kB] Get:39 http://deb.debian.org/debian unstable/main i386 perl-base i386 5.42.3-1 [1959 kB] Get:40 http://deb.debian.org/debian unstable/main i386 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:41 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.22 [216 kB] Get:42 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.14.8-1 [1020 B] Get:43 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.14.8-1 [8756 B] Get:44 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.14.8-1 [8516 B] Get:45 http://deb.debian.org/debian unstable/main i386 python3 i386 3.14.8-1 [26.3 kB] Get:46 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.14.8-1 [992 B] Get:47 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.14.8-1 [1024 B] Get:48 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.14.8-1 [26.7 kB] Get:49 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.14.8-1 [25.8 kB] Get:50 http://deb.debian.org/debian unstable/main i386 libpython3.14 i386 3.14.10-1 [2457 kB] Get:51 http://deb.debian.org/debian unstable/main i386 libpython3.14-dev i386 3.14.10-1 [5814 kB] Get:52 http://deb.debian.org/debian unstable/main i386 libpython3.14-minimal i386 3.14.10-1 [903 kB] Get:53 http://deb.debian.org/debian unstable/main i386 libpython3.14-stdlib i386 3.14.10-1 [2372 kB] Get:54 http://deb.debian.org/debian unstable/main i386 python3.14 i386 3.14.10-1 [884 kB] Get:55 http://deb.debian.org/debian unstable/main i386 python3.14-dev i386 3.14.10-1 [508 kB] Get:56 http://deb.debian.org/debian unstable/main i386 python3.14-minimal i386 3.14.10-1 [2676 kB] Get:57 http://deb.debian.org/debian unstable/main i386 libpython3.15 i386 3.15.2-1 [2400 kB] Get:58 http://deb.debian.org/debian unstable/main i386 libpython3.15-dev i386 3.15.2-1 [5820 kB] Get:59 http://deb.debian.org/debian unstable/main i386 libpython3.15-minimal i386 3.15.2-1 [921 kB] Get:60 http://deb.debian.org/debian unstable/main i386 libpython3.15-stdlib i386 3.15.2-1 [2954 kB] Get:61 http://deb.debian.org/debian unstable/main i386 python3.15 i386 3.15.2-1 [945 kB] Get:62 http://deb.debian.org/debian unstable/main i386 python3.15-dev i386 3.15.2-1 [509 kB] Get:63 http://deb.debian.org/debian unstable/main i386 python3.15-minimal i386 3.15.2-1 [2633 kB] Get:64 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.3-4 [185 kB] Get:65 http://deb.debian.org/debian unstable/main i386 readline-common all 8.3-4 [74.8 kB] Get:66 http://deb.debian.org/debian unstable/main i386 sed i386 4.9-3 [334 kB] Get:67 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.26 [27.0 kB] Get:68 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 84.2.0-1 [602 kB] Get:69 http://deb.debian.org/debian unstable/main i386 libsimde-dev all 0.8.4~rc3-5 [500 kB] Get:70 http://deb.debian.org/debian unstable/main i386 libsqlite3-0 i386 3.53.4-2 [1050 kB] Get:71 http://deb.debian.org/debian unstable/main i386 swig i386 4.5.1-2 [1665 kB] Get:72 http://deb.debian.org/debian unstable/main i386 libsystemd0 i386 262.1-1 [519 kB] Get:73 http://deb.debian.org/debian unstable/main i386 libudev1 i386 262.1-1 [150 kB] Get:74 http://deb.debian.org/debian unstable/main i386 sysvinit-utils i386 3.18-1 [30.2 kB] Get:75 http://deb.debian.org/debian unstable/main i386 tzdata all 2026e-1 [262 kB] Get:76 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-2+b2 [69.2 kB] Get:77 http://deb.debian.org/debian unstable/main i386 libmount1 i386 2.42.4-1 [243 kB] Get:78 http://deb.debian.org/debian unstable/main i386 libsmartcols1 i386 2.42.4-1 [162 kB] Get:79 http://deb.debian.org/debian unstable/main i386 libuuid1 i386 2.42.4-1 [35.6 kB] Get:80 http://deb.debian.org/debian unstable/main i386 util-linux i386 2.42.4-1 [1289 kB] Get:81 http://deb.debian.org/debian unstable/main i386 xz-utils i386 5.8.4-1 [765 kB] Get:82 http://deb.debian.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg+really1.3.2-4 [88.8 kB] Get:83 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.2-4 [917 kB] Get:84 http://snapshot.debian.org/archive/debian/20261027T083111Z forky/main i386 tar i386 1.35+dfsg-6 [846 kB] Fetched 75.6 MB in 0s (187 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3.15-minimal_3.15.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libstdc++-16-dev_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libuuid1_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libsimde-dev_0.8.4~rc3-5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/perl-base_5.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libsystemd0_262.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libmount1_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libmpfr6_4.2.2-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.14-minimal_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/mawk_1.3.4.20260302-2_i386.deb' dpkg-name: info: moved 'python3-numpy-dev_1%3a2.4.6+ds-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpb25_80ij/python3-numpy-dev_2.4.6+ds-5+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libxml2-16_2.15.4+dfsg-1+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpam-modules-bin_1.7.0-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/util-linux_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3-all-dev_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libperl5.42_5.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libstdc++6_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpam0g_1.7.0-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/ncurses-base_6.6+20260608-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/m4_1.4.21-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libreadline8t64_8.3-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/perl-modules-5.42_5.42.3-1_all.deb' dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-4_i386.deb' to '/srv/rebuilderd/tmp/tmpb25_80ij/zlib1g_1.3.dfsg+really1.3.2-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libncursesw6_6.6+20260608-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.14-dev_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libtinfo6_6.6+20260608-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libmd0_1.3.0-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/po-debconf_1.0.22_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpam-runtime_1.7.0-8_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/sysvinit-utils_3.18-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/perl_5.42.3-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/patch_2.8.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3-setuptools_84.2.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libubsan1_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.14-stdlib_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3.14-minimal_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/media-types_14.0.0_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3.14-dev_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3.14_3.14.10-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libunistring5_1.4.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3-all_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/tzdata_2026e-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.15_3.15.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libseccomp2_2.6.1-1+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3-all-dev_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpam-modules_1.7.0-8_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/man-db_2.13.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libsqlite3-0_3.53.4-2_i386.deb' 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'/srv/rebuilderd/tmp/tmpb25_80ij/libudev1_262.1-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/make_4.4.1-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/sed_4.9-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3-dev_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libsmartcols1_2.42.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3.15_3.15.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.15-minimal_3.15.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/readline-common_8.3-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/openssl-provider-legacy_3.6.5-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/sensible-utils_0.0.26_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/tar_1.35+dfsg-6_i386.deb' dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-4_i386.deb' to '/srv/rebuilderd/tmp/tmpb25_80ij/zlib1g-dev_1.3.dfsg+really1.3.2-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3-dev_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libmpc3_1.3.1-3_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/xz-utils_5.8.4-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/ncurses-bin_6.6+20260608-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libuchardet0_0.0.8-2+b2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpipeline1_1.5.8-3_i386.deb' dpkg-name: info: moved 'python3-numpy_1%3a2.4.6+ds-5+b1_i386.deb' to '/srv/rebuilderd/tmp/tmpb25_80ij/python3-numpy_2.4.6+ds-5+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/python3-minimal_3.14.8-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/swig_4.5.1-2_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libpython3.15-stdlib_3.15.2-1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libselinux1_3.11-2.1+b1_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/libquadmath0_16.2.0-4_i386.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb25_80ij/netbase_6.6_all.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpa09eaezl/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: i386 is different from amd64 but can be executed natively I: using /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx 127.0.0.1 - - [28/Oct/2026 05:04:38] code 404, message File not found 127.0.0.1 - - [28/Oct/2026 05:04:38] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38295 ./ InRelease 127.0.0.1 - - [28/Oct/2026 05:04:38] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:38295 ./ Release [462 B] 127.0.0.1 - - [28/Oct/2026 05:04:38] code 404, message File not found 127.0.0.1 - - [28/Oct/2026 05:04:38] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38295 ./ Release.gpg 127.0.0.1 - - [28/Oct/2026 05:04:38] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:38295 ./ Packages [224 kB] Fetched 225 kB in 0s (10.3 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx 127.0.0.1 - - [28/Oct/2026 05:04:40] code 404, message File not found 127.0.0.1 - - [28/Oct/2026 05:04:40] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38295 ./ InRelease 127.0.0.1 - - [28/Oct/2026 05:04:40] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:38295 ./ Release 127.0.0.1 - - [28/Oct/2026 05:04:40] code 404, message File not found 127.0.0.1 - - [28/Oct/2026 05:04:40] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38295 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./libexpat1_2.9.0-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./libpython3.14-minimal_3.14.10-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./python3.14-minimal_3.14.10-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./python3-minimal_3.14.8-1_i386.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./netbase_6.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./tzdata_2026e-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [28/Oct/2026 05:04:59] "GET /./libffi8_3.8.0-2_i386.deb HTTP/1.1" 200 - 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I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpa09eaezl/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx Reading package lists... Building dependency tree... Reading state information... libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. dpkg is already the newest version (1.23.11). intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. binutils-i686-linux-gnu is already the newest version (2.47.50.20261021-1). binutils-i686-linux-gnu set to manually installed. autopoint is already the newest version (1.0-5). autopoint set to manually installed. groff-base is already the newest version (1.24.2-2). groff-base set to manually installed. libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. libdebconfclient0 is already the newest version (0.283). gzip is already the newest version (1.14-1). gcc-16-base is already the newest version (16.2.0-4). grep is already the newest version (3.12-1). autoconf is already the newest version (2.73-2). autoconf set to manually installed. libc-dev-bin is already the newest version (2.43-7). libc-dev-bin set to manually installed. libattr1 is already the newest version (1:2.6.0-1). gettext-base is already the newest version (1.0-5). gettext-base set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. cpp-16-i686-linux-gnu is already the newest version (16.2.0-4). cpp-16-i686-linux-gnu set to manually installed. bash is already the newest version (5.3-4). libbinutils is already the newest version (2.47.50.20261021-1). libbinutils set to manually installed. bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. libc6 is already the newest version (2.43-7). libacl1 is already the newest version (2.4.0-1). libgfortran5 is already the newest version (16.2.0-4). libgfortran5 set to manually installed. libboost1.92-dev is already the newest version (1.92.0-4+b1). libboost1.92-dev set to manually installed. libctf-nobfd0 is already the newest version (2.47.50.20261021-1). libctf-nobfd0 set to manually installed. cpp-i686-linux-gnu is already the newest version (4:16.1.0-3). cpp-i686-linux-gnu set to manually installed. architecture-properties is already the newest version (0.2.6+b2). architecture-properties set to manually installed. libjs-sphinxdoc is already the newest version (9.2.0-1). libjs-sphinxdoc set to manually installed. libcap-ng0 is already the newest version (0.9.6-1+b1). libc6-dev is already the newest version (2.43-7). libc6-dev set to manually installed. libgomp1 is already the newest version (16.2.0-4). libgomp1 set to manually installed. libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. binutils-common is already the newest version (2.47.50.20261021-1). binutils-common set to manually installed. libgcc-s1 is already the newest version (16.2.0-4). libatomic1 is already the newest version (16.2.0-4). libatomic1 set to manually installed. debhelper is already the newest version (14.5). debhelper set to manually installed. libblkid1 is already the newest version (2.42.4-1). libboost-dev is already the newest version (1.92.0.1). libboost-dev set to manually installed. g++-16 is already the newest version (16.2.0-4). g++-16 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). libc-gconv-modules-extra is already the newest version (2.43-7). bsdextrautils is already the newest version (2.42.4-1). bsdextrautils set to manually installed. libasan8 is already the newest version (16.2.0-4). libasan8 set to manually installed. libcrypt1 is already the newest version (1:4.5.2+20251210-1). findutils is already the newest version (4.11.0-3). libaudit1 is already the newest version (1:4.2.1-1). libboost-regex1.92.0 is already the newest version (1.92.0-4+b1). libboost-regex1.92.0 set to manually installed. binutils is already the newest version (2.47.50.20261021-1). binutils set to manually installed. libgprofng0 is already the newest version (2.47.50.20261021-1). libgprofng0 set to manually installed. coreutils is already the newest version (9.10-1). libcc1-0 is already the newest version (16.2.0-4). libcc1-0 set to manually installed. g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. file is already the newest version (1:5.47-4). file set to manually installed. dpkg-dev is already the newest version (1.23.11). dpkg-dev set to manually installed. g++-16-i686-linux-gnu is already the newest version (16.2.0-4). g++-16-i686-linux-gnu set to manually installed. diffutils is already the newest version (1:3.12-1). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). libboost-regex1.92-dev is already the newest version (1.92.0-4+b1). libboost-regex1.92-dev set to manually installed. libdebhelper-perl is already the newest version (14.5). libdebhelper-perl set to manually installed. libelf1t64 is already the newest version (0.196-1). libelf1t64 set to manually installed. init-system-helpers is already the newest version (1.69+nmu3). autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. automake is already the newest version (1:1.19-3). automake set to manually installed. g++-i686-linux-gnu is already the newest version (4:16.1.0-3). g++-i686-linux-gnu set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libexpat1 is already the newest version (2.9.0-1). libexpat1 set to manually installed. libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. debconf is already the newest version (1.5.92). base-passwd is already the newest version (3.6.8). libitm1 is already the newest version (16.2.0-4). libitm1 set to manually installed. cpp-16 is already the newest version (16.2.0-4). cpp-16 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. liblzma5 is already the newest version (5.8.4-1). libaudit-common is already the newest version (1:4.2.1-1). libdpkg-perl is already the newest version (1.23.11). libdpkg-perl set to manually installed. dh-autoreconf is already the newest version (23). dh-autoreconf set to manually installed. dash is already the newest version (0.5.12-12). gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. dh-python is already the newest version (7.20261025). dh-python set to manually installed. hostname is already the newest version (3.25). libbz2-1.0 is already the newest version (1.0.8-6+b2). libctf0 is already the newest version (2.47.50.20261021-1). libctf0 set to manually installed. gcc-i686-linux-gnu is already the newest version (4:16.1.0-3). gcc-i686-linux-gnu set to manually installed. gettext is already the newest version (1.0-5). gettext set to manually installed. libexpat1-dev is already the newest version (2.9.0-1). libexpat1-dev set to manually installed. libc-bin is already the newest version (2.43-7). libgcc-16-dev is already the newest version (16.2.0-4). libgcc-16-dev set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. debianutils is already the newest version (5.24). base-files is already the newest version (14.2). gcc-16 is already the newest version (16.2.0-4). gcc-16 set to manually installed. gcc-16-i686-linux-gnu is already the newest version (16.2.0-4). gcc-16-i686-linux-gnu set to manually installed. dwz is already the newest version (0.17-1). dwz set to manually installed. libffi8 is already the newest version (3.8.0-2). libffi8 set to manually installed. python3.15-minimal is already the newest version (3.15.2-1). python3.15-minimal set to manually installed. libstdc++-16-dev is already the newest version (16.2.0-4). libstdc++-16-dev set to manually installed. libuuid1 is already the newest version (2.42.4-1). libsimde-dev is already the newest version (0.8.4~rc3-5). libsimde-dev set to manually installed. perl-base is already the newest version (5.42.3-1). libsystemd0 is already the newest version (262.1-1). libmount1 is already the newest version (2.42.4-1). libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. libpython3.14-minimal is already the newest version (3.14.10-1). libpython3.14-minimal set to manually installed. mawk is already the newest version (1.3.4.20260302-2). libxml2-16 is already the newest version (2.15.4+dfsg-1+b1). libxml2-16 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-8). util-linux is already the newest version (2.42.4-1). python3-all-dev is already the newest version (3.14.8-1). python3-all-dev set to manually installed. libperl5.42 is already the newest version (5.42.3-1). libperl5.42 set to manually installed. libstdc++6 is already the newest version (16.2.0-4). libstdc++6 set to manually installed. libpam0g is already the newest version (1.7.0-8). ncurses-base is already the newest version (6.6+20260608-2). m4 is already the newest version (1.4.21-1). m4 set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. perl-modules-5.42 is already the newest version (5.42.3-1). perl-modules-5.42 set to manually installed. libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. libpython3.14-dev is already the newest version (3.14.10-1). libpython3.14-dev set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). libmd0 is already the newest version (1.3.0-1). po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libpam-runtime is already the newest version (1.7.0-8). sysvinit-utils is already the newest version (3.18-1). perl is already the newest version (5.42.3-1). perl set to manually installed. patch is already the newest version (2.8.1-1). patch set to manually installed. python3-setuptools is already the newest version (84.2.0-1). python3-setuptools set to manually installed. libubsan1 is already the newest version (16.2.0-4). libubsan1 set to manually installed. python3-numpy-dev is already the newest version (1:2.4.6+ds-5+b1). python3-numpy-dev set to manually installed. libpython3.14-stdlib is already the newest version (3.14.10-1). libpython3.14-stdlib set to manually installed. python3.14-minimal is already the newest version (3.14.10-1). python3.14-minimal set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3.14-dev is already the newest version (3.14.10-1). python3.14-dev set to manually installed. python3 is already the newest version (3.14.8-1). python3 set to manually installed. python3.14 is already the newest version (3.14.10-1). python3.14 set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. python3-all is already the newest version (3.14.8-1). python3-all set to manually installed. python3-numpy is already the newest version (1:2.4.6+ds-5+b1). python3-numpy set to manually installed. tzdata is already the newest version (2026e-1). tzdata set to manually installed. libpython3.15 is already the newest version (3.15.2-1). libpython3.15 set to manually installed. libseccomp2 is already the newest version (2.6.1-1+b2). libseccomp2 set to manually installed. libpython3-all-dev is already the newest version (3.14.8-1). libpython3-all-dev set to manually installed. libpam-modules is already the newest version (1.7.0-8). man-db is already the newest version (2.13.1-1). man-db set to manually installed. libsqlite3-0 is already the newest version (3.53.4-2). libsqlite3-0 set to manually installed. libtool is already the newest version (2.6.2-3). libtool set to manually installed. linux-libc-dev is already the newest version (7.2.12-1). linux-libc-dev set to manually installed. libpython3-stdlib is already the newest version (3.14.8-1). libpython3-stdlib set to manually installed. libpcre2-8-0 is already the newest version (10.48-3.1). libpython3.15-dev is already the newest version (3.15.2-1). libpython3.15-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-4). libssl3t64 is already the newest version (3.6.5-1). libsframe3 is already the newest version (2.47.50.20261021-1). libsframe3 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-4). zlib1g-dev set to manually installed. libpython3.14 is already the newest version (3.14.10-1). libpython3.14 set to manually installed. python3.15-dev is already the newest version (3.15.2-1). python3.15-dev set to manually installed. libudev1 is already the newest version (262.1-1). make is already the newest version (4.4.1-3). make set to manually installed. sed is already the newest version (4.9-3). libpython3-dev is already the newest version (3.14.8-1). libpython3-dev set to manually installed. libsmartcols1 is already the newest version (2.42.4-1). python3.15 is already the newest version (3.15.2-1). python3.15 set to manually installed. libpython3.15-minimal is already the newest version (3.15.2-1). libpython3.15-minimal set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. openssl-provider-legacy is already the newest version (3.6.5-1). sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. tar is already the newest version (1.35+dfsg-6). python3-dev is already the newest version (3.14.8-1). python3-dev set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. xz-utils is already the newest version (5.8.4-1). xz-utils set to manually installed. ncurses-bin is already the newest version (6.6+20260608-2). libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. python3-minimal is already the newest version (3.14.8-1). python3-minimal set to manually installed. swig is already the newest version (4.5.1-2). swig set to manually installed. libpython3.15-stdlib is already the newest version (3.15.2-1). libpython3.15-stdlib set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-4). libselinux1 is already the newest version (3.11-2.1+b1). libquadmath0 is already the newest version (16.2.0-4). libquadmath0 set to manually installed. netbase is already the newest version (6.6). netbase set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx (Reading database ... 37540 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.NWJwpbH4dx... I: success in 138.9322 seconds Downloading packages 1to 100 out of 184 Downloading packages 101to 184 out of 184 env --chdir=/srv/rebuilderd/tmp/rebuilderdsMCmAl/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767942233 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildyuZKvu/debrebuild.sbuildrc.mgQJj534MV6g sbuild --build=i386 --host=i386 --arch-any --no-arch-all --binNMU-changelog= consensuscore (1.1.1+dfsg-9+b3) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for i386; no source changes. * Rebuild with Python 3.15 as supported version -- amd64 / i386 Build Daemon (x86-ubc-02) Fri, 09 Jan 2026 07:03:53 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildyuZKvu/debrebuild.tar.zQmNI_bZDaHW --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs/consensuscore_1.1.1+dfsg-9.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on infom07-amd64 +==============================================================================+ | consensuscore 1.1.1+dfsg-9+b3 (i386) Wed, 28 Oct 2026 05:06:58 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-9+b3 Source Version: 1.1.1+dfsg-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: i386 Build Architecture: i386 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildyuZKvu/debrebuild.tar.zQmNI_bZDaHW to /srv/rebuilderd/tmp/tmp.sbuild.q05X9bTRgM... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Wed, 28 Oct 2026 05:07:06 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs/consensuscore_1.1.1+dfsg-9.dsc exists in /srv/rebuilderd/tmp/rebuilderdsMCmAl/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Wed, 28 Oct 2026 05:07:08 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-q2Puty/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Wed, 28 Oct 2026 05:07:13 +0000 | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment Wed, 28 Oct 2026 05:07:13 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.113+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.113-1 (2026-10-15) amd64 (x86_64) Toolchain package versions: binutils_2.47.50.20261021-1 dpkg-dev_1.23.11 g++-16_16.2.0-4 gcc-16_16.2.0-4 libc6-dev_2.43-7 libstdc++-16-dev_16.2.0-4 libstdc++6_16.2.0-4 linux-libc-dev_7.2.12-1 Package versions: architecture-properties_0.2.6+b2 autoconf_2.73-2 automake_1:1.19-3 autopoint_1.0-5 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-4 binutils_2.47.50.20261021-1 binutils-common_2.47.50.20261021-1 binutils-i686-linux-gnu_2.47.50.20261021-1 bsdextrautils_2.42.4-1 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-4 cpp-16-i686-linux-gnu_16.2.0-4 cpp-i686-linux-gnu_4:16.1.0-3 dash_0.5.12-12 debconf_1.5.92 debhelper_14.5 debianutils_5.24 dh-autoreconf_23 dh-exec_0.31 dh-python_7.20261025 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dpkg_1.23.11 dpkg-dev_1.23.11 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-3 g++_4:16.1.0-3 g++-16_16.2.0-4 g++-16-i686-linux-gnu_16.2.0-4 g++-i686-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-4 gcc-16-base_16.2.0-4 gcc-16-i686-linux-gnu_16.2.0-4 gcc-i686-linux-gnu_4:16.1.0-3 gettext_1.0-5 gettext-base_1.0-5 grep_3.12-1 groff-base_1.24.2-2 gzip_1.14-1 hostname_3.25 init-system-helpers_1.69+nmu3 intltool-debian_0.35.0+20060710.6 libacl1_2.4.0-1 libarchive-zip-perl_1.68-1 libasan8_16.2.0-4 libatomic1_16.2.0-4 libattr1_1:2.6.0-1 libaudit-common_1:4.2.1-1 libaudit1_1:4.2.1-1 libbinutils_2.47.50.20261021-1 libblas3_3.12.1-8 libblkid1_2.42.4-1 libboost-dev_1.92.0.1 libboost-regex1.92-dev_1.92.0-4+b1 libboost-regex1.92.0_1.92.0-4+b1 libboost1.92-dev_1.92.0-4+b1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.43-7 libc-dev-bin_2.43-7 libc-gconv-modules-extra_2.43-7 libc6_2.43-7 libc6-dev_2.43-7 libcap-ng0_0.9.6-1+b1 libcc1-0_16.2.0-4 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47.50.20261021-1 libctf0_2.47.50.20261021-1 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.5 libdpkg-perl_1.23.11 libelf1t64_0.196-1 libexpat1_2.9.0-1 libexpat1-dev_2.9.0-1 libffi8_3.8.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-16-dev_16.2.0-4 libgcc-s1_16.2.0-4 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran5_16.2.0-4 libgmp10_2:6.3.0+dfsg-5+b2 libgomp1_16.2.0-4 libgprofng0_2.47.50.20261021-1 libisl23_0.28-1 libitm1_16.2.0-4 libjansson4_2.15.1-1 libjs-sphinxdoc_9.2.0-1 liblapack3_3.12.1-8 liblzma5_5.8.4-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.3.0-1 libmount1_2.42.4-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20260608-2 libpam-modules_1.7.0-8 libpam-modules-bin_1.7.0-8 libpam-runtime_1.7.0-8 libpam0g_1.7.0-8 libpcre2-8-0_10.48-3.1 libperl5.42_5.42.3-1 libpipeline1_1.5.8-3 libpython3-all-dev_3.14.8-1 libpython3-dev_3.14.8-1 libpython3-stdlib_3.14.8-1 libpython3.14_3.14.10-1 libpython3.14-dev_3.14.10-1 libpython3.14-minimal_3.14.10-1 libpython3.14-stdlib_3.14.10-1 libpython3.15_3.15.2-1 libpython3.15-dev_3.15.2-1 libpython3.15-minimal_3.15.2-1 libpython3.15-stdlib_3.15.2-1 libquadmath0_16.2.0-4 libreadline8t64_8.3-4 libseccomp2_2.6.1-1+b2 libselinux1_3.11-2.1+b1 libsframe3_2.47.50.20261021-1 libsimde-dev_0.8.4~rc3-5 libsmartcols1_2.42.4-1 libsqlite3-0_3.53.4-2 libssl3t64_3.6.5-1 libstdc++-16-dev_16.2.0-4 libstdc++6_16.2.0-4 libsystemd0_262.1-1 libtinfo6_6.6+20260608-2 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zlib1g-dev_1:1.3.dfsg+really1.3.2-4 +------------------------------------------------------------------------------+ | Build Wed, 28 Oct 2026 05:07:13 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit [!i386], architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz ac12995d4ce310fb671f720f1229e09aef7f26c2 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 949772e680d176bd186c5326388ebdcf 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmlgqxwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBp7ZhAAvUnjkG3krPpq/gREqdP+b35fjw3OJN8w e0Y94gfMgaqrEBcSAtHOKjMkJQ5GchDLdu88C6OAO2OyIV58rDXaWHYq8YU5RmVK 57GZKb/B4viGxZXtcwyMPz4abCD92wk0FFvQR0h+uFpcAttSM3PF2zdzghFWyu0G 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dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 1.1.1+dfsg-9+b3 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767942233 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-9+b3 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 / i386 Build Daemon (x86-ubc-02) dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:383: python3.15 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.15_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.15' does not exist -- can't clean it I: pybuild base:383: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:383: python3.15 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config I: pybuild base:383: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:383: /usr/bin/python3.15 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.1 PYTHON_INCLUDE = /usr/include/python3.15 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::DenseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:221:16: required from here 221 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:222:16: required from here 222 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:223:16: required from here 223 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::EdnaEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:224:16: required from here 224 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o src/C++/Align/PairwiseAlignment.cpp: In function ‘std::vector ConsensusCore::TargetToQueryPositions(const std::string&)’: src/C++/Align/PairwiseAlignment.cpp:198:9: warning: variable ‘targetPos’ set but not used [-Wunused-but-set-variable=] 198 | int targetPos = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.15 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' I: pybuild base:383: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.1 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind.hpp:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (0 ms) [----------] 3 tests from PairwiseAlignmentTests (0 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (32 ms) [----------] 2 tests from AffineAlignmentTests (32 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (1 ms) [----------] 1 test from LinearAlignmentTests (1 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (0 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/0 (3 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (0 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (1 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/1 (4 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (1 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/2 (4 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (0 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/3 (4 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (1 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (1 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (2 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (3 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (0 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/1 (3 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (4 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/2 (4 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (4 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (0 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (4 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (26 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (26 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (27 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (23 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (24 ms) [----------] 5 tests from RecursorFuzzTest/0 (126 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (81 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (109 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (96 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (24 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (23 ms) [----------] 5 tests from RecursorFuzzTest/1 (333 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (66 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (70 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (84 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (21 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (21 ms) [----------] 5 tests from RecursorFuzzTest/2 (262 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (89 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (109 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (112 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (22 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (22 ms) [----------] 5 tests from RecursorFuzzTest/3 (355 ms total) [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (1 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (0 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (1 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (0 ms) [----------] 4 tests from PoaGraph (2 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (0 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (0 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (0 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (0 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (6 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (1 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (700 ms) [----------] 8 tests from PoaConsensus (708 ms total) [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (0 ms total) [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (0 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (3 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (3 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (0 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (3 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (3 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (0 ms total) [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (1 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (0 ms) [----------] 4 tests from MutationEnumerationTest (1 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (0 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (0 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (77 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (75 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (100 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (58 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (3 ms) [----------] 5 tests from QvEvaluatorTest (313 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (0 ms) [----------] 1 test from QuiverConfigTableTests (0 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (0 ms) [----------] 3 tests from MutationOrientationTests (0 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (0 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (1 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (5 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (2172 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:383: /usr/bin/python3.15 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.1 PYTHON_INCLUDE = /usr/include/python3.15 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.15 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.15_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.15_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.15/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.15_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.15/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.15_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.15/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.15/dist-packages/ConsensusCore.py to ConsensusCore.cpython-315.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.15/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:383: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.1 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.1 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/i386-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:534: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-i386-linux-gnu.so I: dh_python3 fs:534: renaming _ConsensusCore.so to _ConsensusCore.cpython-315-i386-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68. dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-9+b3_i386.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-9+b3_i386.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b3_i386.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-9+b3_i386.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-9+b3_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-10-28T05:15:46Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Wed, 28 Oct 2026 05:15:47 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-9+b3_i386.changes: ------------------------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 07:03:53 +0000 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Binary-Only: yes Architecture: i386 Version: 1.1.1+dfsg-9+b3 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: amd64 / i386 Build Daemon (x86-ubc-02) Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-9+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for i386; no source changes. * Rebuild with Python 3.15 as supported version Checksums-Sha1: 9f96e2eebeeccb77aeb707510419db47878c1642 6997 consensuscore_1.1.1+dfsg-9+b3_i386.buildinfo 44349880f70857bdcece76cfe1482fa3fbeed6e8 517504 libconsensuscore-dev_1.1.1+dfsg-9+b3_i386.deb 41e8dd2f063dcd209a621e42331bfaef7acd4fd6 16161072 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b3_i386.deb 3eba5fdfd8be34380e52de446f8daed5f8f885ec 731576 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+------------------------------------------------------------------------------+ | Buildinfo Wed, 28 Oct 2026 05:15:48 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Architecture: i386 Version: 1.1.1+dfsg-9+b3 Binary-Only-Changes: consensuscore (1.1.1+dfsg-9+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for i386; no source changes. * Rebuild with Python 3.15 as supported version . -- amd64 / i386 Build Daemon (x86-ubc-02) Fri, 09 Jan 2026 07:03:53 +0000 Checksums-Md5: 223070b74872563a3aaf8989648d1b0f 517504 libconsensuscore-dev_1.1.1+dfsg-9+b3_i386.deb 096c54553266e5fc1363c7388bcea65e 16161072 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b3_i386.deb 59e7b265b35b59300a5a4b367658146b 731576 python3-pbconsensuscore_1.1.1+dfsg-9+b3_i386.deb Checksums-Sha1: 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base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-4), binutils (= 2.47.50.20261021-1), binutils-common (= 2.47.50.20261021-1), binutils-i686-linux-gnu (= 2.47.50.20261021-1), bsdextrautils (= 2.42.4-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-16 (= 16.2.0-4), cpp-16-i686-linux-gnu (= 16.2.0-4), cpp-i686-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 14.5), debianutils (= 5.24), dh-autoreconf (= 23), dh-exec (= 0.31), dh-python (= 7.20261025), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.11), dpkg-dev (= 1.23.11), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.11.0-3), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-4), g++-16-i686-linux-gnu (= 16.2.0-4), g++-i686-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-16 (= 16.2.0-4), gcc-16-base (= 16.2.0-4), gcc-16-i686-linux-gnu (= 16.2.0-4), gcc-i686-linux-gnu (= 4:16.1.0-3), gettext (= 1.0-5), gettext-base (= 1.0-5), grep (= 3.12-1), groff-base (= 1.24.2-2), gzip (= 1.14-1), hostname (= 3.25), init-system-helpers (= 1.69+nmu3), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.4.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.2.0-4), libatomic1 (= 16.2.0-4), libattr1 (= 1:2.6.0-1), libaudit-common (= 1:4.2.1-1), libaudit1 (= 1:4.2.1-1), libbinutils (= 2.47.50.20261021-1), libblas3 (= 3.12.1-8), libblkid1 (= 2.42.4-1), libboost-dev (= 1.92.0.1), libboost-regex1.92-dev (= 1.92.0-4+b1), libboost-regex1.92.0 (= 1.92.0-4+b1), libboost1.92-dev (= 1.92.0-4+b1), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.43-7), libc-dev-bin (= 2.43-7), libc-gconv-modules-extra (= 2.43-7), libc6 (= 2.43-7), libc6-dev (= 2.43-7), libcap-ng0 (= 0.9.6-1+b1), libcc1-0 (= 16.2.0-4), libcrypt1 (= 1:4.5.2+20251210-1), libctf-nobfd0 (= 2.47.50.20261021-1), libctf0 (= 2.47.50.20261021-1), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.5), libdpkg-perl (= 1.23.11), libelf1t64 (= 0.196-1), libexpat1 (= 2.9.0-1), libexpat1-dev (= 2.9.0-1), libffi8 (= 3.8.0-2), libfile-stripnondeterminism-perl (= 1.15.1-1), libgcc-16-dev (= 16.2.0-4), libgcc-s1 (= 16.2.0-4), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgfortran5 (= 16.2.0-4), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgomp1 (= 16.2.0-4), libgprofng0 (= 2.47.50.20261021-1), libisl23 (= 0.28-1), libitm1 (= 16.2.0-4), libjansson4 (= 2.15.1-1), libjs-sphinxdoc (= 9.2.0-1), liblapack3 (= 3.12.1-8), liblzma5 (= 5.8.4-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.3.0-1), libmount1 (= 2.42.4-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libncursesw6 (= 6.6+20260608-2), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam0g (= 1.7.0-8), libpcre2-8-0 (= 10.48-3.1), libperl5.42 (= 5.42.3-1), libpipeline1 (= 1.5.8-3), libpython3-all-dev (= 3.14.8-1), libpython3-dev (= 3.14.8-1), libpython3-stdlib (= 3.14.8-1), libpython3.14 (= 3.14.10-1), libpython3.14-dev (= 3.14.10-1), libpython3.14-minimal (= 3.14.10-1), libpython3.14-stdlib (= 3.14.10-1), libpython3.15 (= 3.15.2-1), libpython3.15-dev (= 3.15.2-1), libpython3.15-minimal (= 3.15.2-1), libpython3.15-stdlib (= 3.15.2-1), libquadmath0 (= 16.2.0-4), libreadline8t64 (= 8.3-4), libseccomp2 (= 2.6.1-1+b2), libselinux1 (= 3.11-2.1+b1), libsframe3 (= 2.47.50.20261021-1), libsimde-dev (= 0.8.4~rc3-5), libsmartcols1 (= 2.42.4-1), libsqlite3-0 (= 3.53.4-2), libssl3t64 (= 3.6.5-1), libstdc++-16-dev (= 16.2.0-4), libstdc++6 (= 16.2.0-4), libsystemd0 (= 262.1-1), libtinfo6 (= 6.6+20260608-2), libtool (= 2.6.2-3), libubsan1 (= 16.2.0-4), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 262.1-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42.4-1), libxml2-16 (= 2.15.4+dfsg-1+b1), libzstd1 (= 1.5.7+dfsg-4), linux-libc-dev (= 7.2.12-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-2), media-types (= 14.0.0), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), netbase (= 6.6), openssl-provider-legacy (= 3.6.5-1), patch (= 2.8.1-1), perl (= 5.42.3-1), perl-base (= 5.42.3-1), perl-modules-5.42 (= 5.42.3-1), po-debconf (= 1.0.22), python3 (= 3.14.8-1), python3-all (= 3.14.8-1), python3-all-dev (= 3.14.8-1), python3-dev (= 3.14.8-1), python3-minimal (= 3.14.8-1), python3-numpy (= 1:2.4.6+ds-5+b1), python3-numpy-dev (= 1:2.4.6+ds-5+b1), python3-setuptools (= 84.2.0-1), python3.14 (= 3.14.10-1), python3.14-dev (= 3.14.10-1), python3.14-minimal (= 3.14.10-1), python3.15 (= 3.15.2-1), python3.15-dev (= 3.15.2-1), python3.15-minimal (= 3.15.2-1), readline-common (= 8.3-4), sed (= 4.9-3), sensible-utils (= 0.0.26), swig (= 4.5.1-2), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-6), tzdata (= 2026e-1), util-linux (= 2.42.4-1), xz-utils (= 5.8.4-1), zlib1g (= 1:1.3.dfsg+really1.3.2-4), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-4) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1767942233" +------------------------------------------------------------------------------+ | Package contents Wed, 28 Oct 2026 05:15:48 +0000 | +------------------------------------------------------------------------------+ libconsensuscore-dev_1.1.1+dfsg-9+b3_i386.deb --------------------------------------------- new Debian package, version 2.0. size 517504 bytes: control archive=2216 bytes. 768 bytes, 18 lines control 4413 bytes, 54 lines md5sums Package: libconsensuscore-dev Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 3060 Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the header files and static library. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/ drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/ -rw-r--r-- root/root 1214 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AffineAlignment.hpp -rw-r--r-- root/root 775 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AlignConfig.hpp -rw-r--r-- root/root 565 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/LinearAlignment.hpp -rw-r--r-- root/root 1956 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/PairwiseAlignment.hpp -rw-r--r-- root/root 196 2018-08-14 14:23 ./usr/include/ConsensusCore/Checksum.hpp -rw-r--r-- root/root 653 2018-08-14 14:23 ./usr/include/ConsensusCore/Coverage.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Edna/ -rw-r--r-- root/root 792 2018-08-14 14:23 ./usr/include/ConsensusCore/Edna/EdnaConfig.hpp -rw-r--r-- root/root 513 2018-08-14 14:23 ./usr/include/ConsensusCore/Edna/EdnaCounts.hpp -rw-r--r-- root/root 5876 2026-01-09 07:03 ./usr/include/ConsensusCore/Edna/EdnaEvaluator.hpp -rw-r--r-- root/root 2788 2018-08-14 14:23 ./usr/include/ConsensusCore/Feature.hpp -rw-r--r-- root/root 2051 2018-08-14 14:23 ./usr/include/ConsensusCore/Features.hpp -rw-r--r-- root/root 1517 2018-08-14 14:23 ./usr/include/ConsensusCore/Interval.hpp -rw-r--r-- root/root 838 2026-01-09 07:03 ./usr/include/ConsensusCore/LFloat.hpp -rw-r--r-- root/root 510 2018-08-14 14:23 ./usr/include/ConsensusCore/Logging.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Matrix/ -rw-r--r-- root/root 734 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/AbstractMatrix.hpp -rw-r--r-- root/root 3113 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/DenseMatrix-inl.hpp -rw-r--r-- root/root 2549 2026-01-09 07:03 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./usr/include/ConsensusCore/Poa/RangeFinder.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/ -rw-r--r-- root/root 531 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/Diploid.hpp -rw-r--r-- root/root 7338 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp -rw-r--r-- root/root 1178 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator-inl.hpp -rw-r--r-- root/root 1776 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator.hpp -rw-r--r-- root/root 1924 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationScorer.hpp -rw-r--r-- root/root 5260 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConfig.hpp -rw-r--r-- root/root 933 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConsensus.hpp -rw-r--r-- root/root 6723 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/QvEvaluator.hpp -rw-r--r-- root/root 773 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/ReadScorer.hpp 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2018-08-14 14:23 ./usr/share/doc/libconsensuscore-dev/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/libconsensuscore-dev/copyright python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b3_i386.deb ------------------------------------------------------- new Debian package, version 2.0. size 16161072 bytes: control archive=660 bytes. 497 bytes, 12 lines control 310 bytes, 3 lines md5sums Package: python3-pbconsensuscore-dbgsym Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b3 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 17550 Depends: python3-pbconsensuscore (= 1.1.1+dfsg-9+b3) Section: debug Priority: optional Description: debug symbols for python3-pbconsensuscore Build-Ids: 96283eec7600fc70b035930a6ea8cb955e61c765 d963e19bc94b28d719a912d6393a9147951172ac drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ 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python3-pbconsensuscore_1.1.1+dfsg-9+b3_i386.deb ------------------------------------------------ new Debian package, version 2.0. size 731576 bytes: control archive=1432 bytes. 889 bytes, 18 lines control 978 bytes, 10 lines md5sums 299 bytes, 12 lines * postinst #!/bin/sh 437 bytes, 12 lines * prerm #!/bin/sh Package: python3-pbconsensuscore Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 6191 Depends: python3 (<< 3.16), python3 (>= 3.14~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.29), libgcc-s1 (>= 3.4), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. 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