=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo Source: consensuscore Version: 1.1.1+dfsg-9 rebuilderd-worker node: osuosl7-ppc64el +------------------------------------------------------------------------------+ | Downloading sources Thu, 01 Oct 2026 13:06:20 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.7 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [238 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [1,840 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [105 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [313 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3,412 B] Get:17 https://deb.debian.org/debian forky/main Sources [11.3 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7,872 B] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [10.8 kB] Get:20 https://deb.debian.org/debian sid/main Sources [12.0 MB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2,568 B] Get:22 https://deb.debian.org/debian experimental/main Sources [388 kB] Fetched 35.7 MB in 5s (7,862 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.dsc' consensuscore_1.1.1+dfsg-9.dsc 2374 SHA256:a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.debian.tar.xz' consensuscore_1.1.1+dfsg-9.debian.tar.xz 10340 SHA256:4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e consensuscore_1.1.1+dfsg-9.debian.tar.xz a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf consensuscore_1.1.1+dfsg-9.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Thu, 01 Oct 2026 13:06:25 +0000 | +------------------------------------------------------------------------------+ Rebuilding consensuscore=1.1.1+dfsg-9 in /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs now. + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdNgy6Xc/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable InRelease [193 kB] Get:3 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable InRelease [193 kB] Get:4 http://deb.debian.org/debian unstable/main ppc64el Packages [10.6 MB] Get:5 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el Packages [10.5 MB] Get:6 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el Packages [10.5 MB] Fetched 32.2 MB in 4s (8002 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260903T204250Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20260905T205002Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main ppc64el libacl1 ppc64el 2.4.0-1 [39.2 kB] Get:2 http://deb.debian.org/debian unstable/main ppc64el architecture-properties ppc64el 0.2.6+b2 [2636 B] Get:3 http://deb.debian.org/debian unstable/main ppc64el libattr1 ppc64el 1:2.6.0-1 [25.5 kB] Get:4 http://deb.debian.org/debian unstable/main ppc64el autoconf all 2.73-2 [516 kB] Get:5 http://deb.debian.org/debian unstable/main ppc64el autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:6 http://deb.debian.org/debian unstable/main ppc64el base-files ppc64el 14.2 [88.0 kB] Get:7 http://deb.debian.org/debian unstable/main ppc64el base-passwd ppc64el 3.6.8 [55.8 kB] Get:8 http://deb.debian.org/debian unstable/main ppc64el libboost-dev ppc64el 1.90.0.2+nmu1 [3200 B] Get:9 http://deb.debian.org/debian unstable/main ppc64el libboost1.90-dev ppc64el 1.90.0-6.1+b1 [11.3 MB] Get:10 http://deb.debian.org/debian unstable/main ppc64el build-essential ppc64el 12.12 [4628 B] Get:11 http://deb.debian.org/debian unstable/main ppc64el bzip2 ppc64el 1.0.8-6+b2 [41.0 kB] Get:12 http://deb.debian.org/debian unstable/main ppc64el libbz2-1.0 ppc64el 1.0.8-6+b2 [44.2 kB] Get:13 http://deb.debian.org/debian unstable/main ppc64el libdebconfclient0 ppc64el 0.283 [7608 B] Get:14 http://deb.debian.org/debian unstable/main ppc64el coreutils ppc64el 9.10-1 [3186 kB] Get:15 http://deb.debian.org/debian unstable/main ppc64el dash ppc64el 0.5.12-12 [104 kB] Get:16 http://deb.debian.org/debian unstable/main ppc64el libdb5.3t64 ppc64el 5.3.28+dfsg2-11+b1 [750 kB] Get:17 http://deb.debian.org/debian unstable/main ppc64el debconf all 1.5.92 [123 kB] Get:18 http://deb.debian.org/debian unstable/main ppc64el debianutils ppc64el 5.24 [94.2 kB] Get:19 http://deb.debian.org/debian unstable/main ppc64el dh-exec ppc64el 0.31 [26.7 kB] Get:20 http://deb.debian.org/debian unstable/main ppc64el dh-python all 7.20260623 [114 kB] Get:21 http://deb.debian.org/debian unstable/main ppc64el diffutils ppc64el 1:3.12-1 [413 kB] Get:22 http://deb.debian.org/debian unstable/main ppc64el dwz ppc64el 0.17-1 [114 kB] Get:23 http://deb.debian.org/debian unstable/main ppc64el libelf1t64 ppc64el 0.196-1 [68.0 kB] Get:24 http://deb.debian.org/debian unstable/main ppc64el file ppc64el 1:5.47-4 [44.0 kB] Get:25 http://deb.debian.org/debian unstable/main ppc64el libmagic-mgc ppc64el 1:5.47-4 [345 kB] Get:26 http://deb.debian.org/debian unstable/main ppc64el libmagic1t64 ppc64el 1:5.47-4 [119 kB] Get:27 http://deb.debian.org/debian unstable/main ppc64el findutils ppc64el 4.11.0-2 [812 kB] Get:28 http://deb.debian.org/debian unstable/main ppc64el cpp ppc64el 4:16.1.0-3 [1580 B] Get:29 http://deb.debian.org/debian unstable/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:16.1.0-3 [4476 B] Get:30 http://deb.debian.org/debian unstable/main ppc64el g++ ppc64el 4:16.1.0-3 [1336 B] Get:31 http://deb.debian.org/debian unstable/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:16.1.0-3 [1204 B] Get:32 http://deb.debian.org/debian unstable/main ppc64el gcc ppc64el 4:16.1.0-3 [5152 B] Get:33 http://deb.debian.org/debian unstable/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:16.1.0-3 [1444 B] Get:34 http://deb.debian.org/debian unstable/main ppc64el libgdbm-compat4t64 ppc64el 1.26-1+b2 [52.4 kB] Get:35 http://deb.debian.org/debian unstable/main ppc64el libgdbm6t64 ppc64el 1.26-1+b2 [82.0 kB] Get:36 http://deb.debian.org/debian unstable/main ppc64el libgmp10 ppc64el 2:6.3.0+dfsg-5+b2 [580 kB] Get:37 http://deb.debian.org/debian unstable/main ppc64el grep ppc64el 3.12-1 [455 kB] Get:38 http://deb.debian.org/debian unstable/main ppc64el gzip ppc64el 1.14-1 [147 kB] Get:39 http://deb.debian.org/debian unstable/main ppc64el hostname ppc64el 3.25 [11.3 kB] Get:40 http://deb.debian.org/debian unstable/main ppc64el intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:41 http://deb.debian.org/debian unstable/main ppc64el libisl23 ppc64el 0.28-1 [743 kB] Get:42 http://deb.debian.org/debian unstable/main ppc64el libjansson4 ppc64el 2.15.1-1 [70.9 kB] Get:43 http://deb.debian.org/debian unstable/main ppc64el libblas3 ppc64el 3.12.1-8 [168 kB] Get:44 http://deb.debian.org/debian unstable/main ppc64el liblapack3 ppc64el 3.12.1-8 [2164 kB] Get:45 http://deb.debian.org/debian unstable/main ppc64el libarchive-zip-perl all 1.68-1 [104 kB] Get:46 http://deb.debian.org/debian unstable/main ppc64el libffi8 ppc64el 3.8.0-2 [30.8 kB] Get:47 http://deb.debian.org/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.5.2+20251210-1 [104 kB] Get:48 http://deb.debian.org/debian unstable/main ppc64el dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:49 http://deb.debian.org/debian unstable/main ppc64el libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:50 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libaudit-common all 1:4.1.2-1 [14.3 kB] Get:51 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libaudit1 ppc64el 1:4.1.2-1+b1 [62.6 kB] Get:52 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el automake all 1:1.18.1-4 [877 kB] Get:53 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el bash ppc64el 5.3-3+b1 [1606 kB] Get:54 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el binutils ppc64el 2.47-2 [70.2 kB] Get:55 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el binutils-common ppc64el 2.47-2 [2685 kB] Get:56 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.47-2 [912 kB] Get:57 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libbinutils ppc64el 2.47-2 [629 kB] Get:58 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libctf-nobfd0 ppc64el 2.47-2 [173 kB] Get:59 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libctf0 ppc64el 2.47-2 [104 kB] Get:60 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el debhelper all 14.3 [934 kB] Get:61 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libdebhelper-perl all 14.3 [77.3 kB] Get:62 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el dh-autoreconf all 22 [12.2 kB] Get:63 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el dpkg ppc64el 1.23.7 [1545 kB] Get:64 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el dpkg-dev all 1.23.7 [1318 kB] Get:65 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libdpkg-perl all 1.23.7 [669 kB] Get:66 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libexpat1 ppc64el 2.8.4-1 [125 kB] Get:67 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libexpat1-dev ppc64el 2.8.4-1 [182 kB] Get:68 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el cpp-16 ppc64el 16.2.0-2 [1280 B] Get:69 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el cpp-16-powerpc64le-linux-gnu ppc64el 16.2.0-2 [68.8 MB] Get:70 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el g++-16 ppc64el 16.2.0-2 [35.2 kB] Get:71 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el g++-16-powerpc64le-linux-gnu ppc64el 16.2.0-2 [74.4 MB] Get:72 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el gcc-16 ppc64el 16.2.0-2 [535 kB] Get:73 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el gcc-16-base ppc64el 16.2.0-2 [38.4 kB] Get:74 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el gcc-16-powerpc64le-linux-gnu ppc64el 16.2.0-2 [77.7 MB] Get:75 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libasan8 ppc64el 16.2.0-2 [2795 kB] Get:76 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libatomic1 ppc64el 16.2.0-2 [10.2 kB] Get:77 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libcc1-0 ppc64el 16.2.0-2 [45.4 kB] Get:78 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libgcc-16-dev ppc64el 16.2.0-2 [1486 kB] Get:79 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libgcc-s1 ppc64el 16.2.0-2 [51.9 kB] Get:80 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libgfortran5 ppc64el 16.2.0-2 [560 kB] Get:81 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libgomp1 ppc64el 16.2.0-2 [155 kB] Get:82 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libitm1 ppc64el 16.2.0-2 [29.1 kB] Get:83 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el liblsan0 ppc64el 16.2.0-2 [1273 kB] Get:84 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el autopoint all 1.0-3 [820 kB] Get:85 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el gettext ppc64el 1.0-3 [2722 kB] Get:86 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el gettext-base ppc64el 1.0-3 [353 kB] Get:87 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libc-bin ppc64el 2.43-4 [655 kB] Get:88 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libc-dev-bin ppc64el 2.43-4 [39.3 kB] Get:89 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libc-gconv-modules-extra ppc64el 2.43-4 [1130 kB] Get:90 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libc6 ppc64el 2.43-4 [1746 kB] Get:91 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libc6-dev ppc64el 2.43-4 [1978 kB] Get:92 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el groff-base ppc64el 1.24.1-1 [1336 kB] Get:93 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el init-system-helpers all 1.69+nmu1 [37.1 kB] Get:94 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libcap-ng0 ppc64el 0.9.5-1 [19.1 kB] Get:95 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libmd0 ppc64el 1.2.0-2 [41.9 kB] Get:96 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libjs-sphinxdoc all 9.1.0-7 [46.1 kB] Get:97 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el liblzma5 ppc64el 5.8.3-1 [339 kB] Get:98 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el bsdextrautils ppc64el 2.42.3-1 [128 kB] Get:99 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el libblkid1 ppc64el 2.42.3-1 [208 kB] Get:100 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el libmount1 ppc64el 2.42.3-1 [252 kB] Fetched 275 MB in 2s (174 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libc-bin_2.43-4_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/coreutils_9.10-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libc6_2.43-4_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libdebconfclient0_0.283_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/cpp-16-powerpc64le-linux-gnu_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libblkid1_2.42.3-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dh-autoreconf_22_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libbinutils_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/autopoint_1.0-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/g++-16-powerpc64le-linux-gnu_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gcc-16-powerpc64le-linux-gnu_16.2.0-2_ppc64el.deb' dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libattr1_2.6.0-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/liblsan0_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/g++-16_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libdb5.3t64_5.3.28+dfsg2-11+b1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libitm1_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libboost-dev_1.90.0.2+nmu1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/liblapack3_3.12.1-8_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/autoconf_2.73-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libc-dev-bin_2.43-4_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libexpat1-dev_2.8.4-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libacl1_2.4.0-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libmount1_2.42.3-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gettext-base_1.0-3_ppc64el.deb' dpkg-name: info: moved 'file_1%3a5.47-4_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/file_5.47-4_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/groff-base_1.24.1-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libjansson4_2.15.1-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/autotools-dev_20240727.1+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libelf1t64_0.196-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libmd0_1.2.0-2_ppc64el.deb' dpkg-name: info: moved 'g++_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/g++_16.1.0-3_ppc64el.deb' dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libaudit1_4.1.2-1+b1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libdpkg-perl_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libcap-ng0_0.9.5-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libdebhelper-perl_14.3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgfortran5_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgdbm-compat4t64_1.26-1+b2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libboost1.90-dev_1.90.0-6.1+b1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libblas3_3.12.1-8_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgomp1_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dh-strip-nondeterminism_1.15.1-1_all.deb' dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libmagic-mgc_5.47-4_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/liblzma5_5.8.3-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/base-passwd_3.6.8_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/debconf_1.5.92_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/architecture-properties_0.2.6+b2_ppc64el.deb' dpkg-name: info: moved 'cpp-powerpc64le-linux-gnu_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/cpp-powerpc64le-linux-gnu_16.1.0-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libffi8_3.8.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgcc-16-dev_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgdbm6t64_1.26-1+b2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dpkg-dev_1.23.7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dh-exec_0.31_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/findutils_4.11.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/build-essential_12.12_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/grep_3.12-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libc6-dev_2.43-4_ppc64el.deb' dpkg-name: info: moved 'g++-powerpc64le-linux-gnu_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/g++-powerpc64le-linux-gnu_16.1.0-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dh-python_7.20260623_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/bsdextrautils_2.42.3-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libasan8_16.2.0-2_ppc64el.deb' dpkg-name: info: moved 'gcc_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/gcc_16.1.0-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/init-system-helpers_1.69+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/binutils-common_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libexpat1_2.8.4-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/cpp-16_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gzip_1.14-1_ppc64el.deb' dpkg-name: info: moved 'gcc-powerpc64le-linux-gnu_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/gcc-powerpc64le-linux-gnu_16.1.0-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/bzip2_1.0.8-6+b2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gettext_1.0-3_ppc64el.deb' dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libmagic1t64_5.47-4_ppc64el.deb' dpkg-name: info: moved 'libcrypt1_1%3a4.5.2+20251210-1_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libcrypt1_4.5.2+20251210-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/debianutils_5.24_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/bash_5.3-3+b1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libctf-nobfd0_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libbz2-1.0_1.0.8-6+b2_ppc64el.deb' dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/automake_1.18.1-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libgcc-s1_16.2.0-2_ppc64el.deb' dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libgmp10_6.3.0+dfsg-5+b2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dash_0.5.12-12_ppc64el.deb' dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/libaudit-common_4.1.2-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libctf0_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libjs-sphinxdoc_9.1.0-7_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libatomic1_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dwz_0.17-1_ppc64el.deb' dpkg-name: info: moved 'diffutils_1%3a3.12-1_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/diffutils_3.12-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libcc1-0_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libisl23_0.28-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/binutils_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gcc-16_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/debhelper_14.3_all.deb' dpkg-name: info: moved 'cpp_4%3a16.1.0-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpohu3xp57/cpp_16.1.0-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/hostname_3.25_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/base-files_14.2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/binutils-powerpc64le-linux-gnu_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/gcc-16-base_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/dpkg_1.23.7_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohu3xp57/libc-gconv-modules-extra_2.43-4_ppc64el.deb' Get:1 http://deb.debian.org/debian unstable/main ppc64el python3-jaraco.context all 6.0.1-2 [8184 B] Get:2 http://deb.debian.org/debian unstable/main ppc64el python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:3 http://deb.debian.org/debian unstable/main ppc64el libpipeline1 ppc64el 1.5.8-3 [51.2 kB] Get:4 http://deb.debian.org/debian unstable/main ppc64el libunistring5 ppc64el 1.4.2-1 [496 kB] Get:5 http://deb.debian.org/debian unstable/main ppc64el libzstd1 ppc64el 1.5.7+dfsg-4 [327 kB] Get:6 http://deb.debian.org/debian unstable/main ppc64el m4 ppc64el 1.4.21-1 [340 kB] Get:7 http://deb.debian.org/debian unstable/main ppc64el make ppc64el 4.4.1-3 [470 kB] Get:8 http://deb.debian.org/debian unstable/main ppc64el man-db ppc64el 2.13.1-1 [1481 kB] Get:9 http://deb.debian.org/debian unstable/main ppc64el media-types all 14.0.0 [30.8 kB] Get:10 http://deb.debian.org/debian unstable/main ppc64el libmpc3 ppc64el 1.3.1-3 [72.2 kB] Get:11 http://deb.debian.org/debian unstable/main ppc64el libmpfr6 ppc64el 4.2.2-3 [729 kB] Get:12 http://deb.debian.org/debian unstable/main ppc64el libncursesw6 ppc64el 6.6+20260608-2 [154 kB] Get:13 http://deb.debian.org/debian unstable/main ppc64el libtinfo6 ppc64el 6.6+20260608-2 [362 kB] Get:14 http://deb.debian.org/debian unstable/main ppc64el ncurses-base all 6.6+20260608-2 [276 kB] Get:15 http://deb.debian.org/debian unstable/main ppc64el ncurses-bin ppc64el 6.6+20260608-2 [450 kB] Get:16 http://deb.debian.org/debian unstable/main ppc64el netbase all 6.6 [10.3 kB] Get:17 http://deb.debian.org/debian unstable/main ppc64el libpam-modules ppc64el 1.7.0-8 [195 kB] Get:18 http://deb.debian.org/debian unstable/main ppc64el libpam-modules-bin ppc64el 1.7.0-8 [49.7 kB] Get:19 http://deb.debian.org/debian unstable/main ppc64el libpam-runtime all 1.7.0-8 [246 kB] Get:20 http://deb.debian.org/debian unstable/main ppc64el libpam0g ppc64el 1.7.0-8 [71.4 kB] Get:21 http://deb.debian.org/debian unstable/main ppc64el patch ppc64el 2.8-2 [141 kB] Get:22 http://deb.debian.org/debian unstable/main ppc64el libperl5.42 ppc64el 5.42.3-1 [4258 kB] Get:23 http://deb.debian.org/debian unstable/main ppc64el perl ppc64el 5.42.3-1 [266 kB] Get:24 http://deb.debian.org/debian unstable/main ppc64el perl-base ppc64el 5.42.3-1 [1867 kB] Get:25 http://deb.debian.org/debian unstable/main ppc64el perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:26 http://deb.debian.org/debian unstable/main ppc64el po-debconf all 1.0.22 [216 kB] Get:27 http://deb.debian.org/debian unstable/main ppc64el python3-autocommand all 2.2.2-4 [13.7 kB] Get:28 http://deb.debian.org/debian unstable/main ppc64el python3-inflect all 7.5.0-2 [32.8 kB] Get:29 http://deb.debian.org/debian unstable/main ppc64el python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:30 http://deb.debian.org/debian unstable/main ppc64el python3-typeguard all 4.4.4-3 [37.1 kB] Get:31 http://deb.debian.org/debian unstable/main ppc64el python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:32 http://deb.debian.org/debian unstable/main ppc64el libpython3-all-dev ppc64el 3.14.7-3 [1012 B] Get:33 http://deb.debian.org/debian unstable/main ppc64el libpython3-dev ppc64el 3.14.7-3 [8488 B] Get:34 http://deb.debian.org/debian unstable/main ppc64el libpython3-stdlib ppc64el 3.14.7-3 [8252 B] Get:35 http://deb.debian.org/debian unstable/main ppc64el python3 ppc64el 3.14.7-3 [26.0 kB] Get:36 http://deb.debian.org/debian unstable/main ppc64el python3-all ppc64el 3.14.7-3 [984 B] Get:37 http://deb.debian.org/debian unstable/main ppc64el python3-all-dev ppc64el 3.14.7-3 [1008 B] Get:38 http://deb.debian.org/debian unstable/main ppc64el python3-dev ppc64el 3.14.7-3 [26.7 kB] Get:39 http://deb.debian.org/debian unstable/main ppc64el python3-minimal ppc64el 3.14.7-3 [25.3 kB] Get:40 http://deb.debian.org/debian unstable/main ppc64el libreadline8t64 ppc64el 8.3-4 [192 kB] Get:41 http://deb.debian.org/debian unstable/main ppc64el readline-common all 8.3-4 [74.8 kB] Get:42 http://deb.debian.org/debian unstable/main ppc64el sed ppc64el 4.9-3 [335 kB] Get:43 http://deb.debian.org/debian unstable/main ppc64el sensible-utils all 0.0.26 [27.0 kB] Get:44 http://deb.debian.org/debian unstable/main ppc64el python3-pkg-resources all 80.9.0-2 [224 kB] Get:45 http://deb.debian.org/debian unstable/main ppc64el libsimde-dev all 0.8.4~rc3-5 [500 kB] Get:46 http://deb.debian.org/debian unstable/main ppc64el libsqlite3-0 ppc64el 3.53.4-2 [1025 kB] Get:47 http://deb.debian.org/debian unstable/main ppc64el sysvinit-utils ppc64el 3.18-1 [31.9 kB] Get:48 http://deb.debian.org/debian unstable/main ppc64el tzdata all 2026c-1 [260 kB] Get:49 http://deb.debian.org/debian unstable/main ppc64el libuchardet0 ppc64el 0.0.8-2+b2 [71.0 kB] Get:50 http://deb.debian.org/debian unstable/main ppc64el zlib1g ppc64el 1:1.3.dfsg+really1.3.2-3 [90.4 kB] Get:51 http://deb.debian.org/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:52 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libsframe3 ppc64el 2.47-2 [87.1 kB] Get:53 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libquadmath0 ppc64el 16.2.0-2 [157 kB] Get:54 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libstdc++-16-dev ppc64el 16.2.0-2 [2941 kB] Get:55 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libstdc++6 ppc64el 16.2.0-2 [888 kB] Get:56 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libtsan2 ppc64el 16.2.0-2 [2511 kB] Get:57 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libubsan1 ppc64el 16.2.0-2 [1196 kB] Get:58 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libseccomp2 ppc64el 2.6.1-1 [56.5 kB] Get:59 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libselinux1 ppc64el 3.11-2 [97.2 kB] Get:60 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libtool all 2.6.2-2 [553 kB] Get:61 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el linux-libc-dev all 7.1.12-1 [2062 kB] Get:62 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el mawk ppc64el 1.3.4.20260302-1 [145 kB] Get:63 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3-more-itertools all 11.1.0-2 [74.5 kB] Get:64 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3-numpy ppc64el 1:2.4.6+ds-4 [4877 kB] Get:65 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3-numpy-dev ppc64el 1:2.4.6+ds-4 [140 kB] Get:66 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libssl3t64 ppc64el 3.6.4-1 [2575 kB] Get:67 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el openssl-provider-legacy ppc64el 3.6.4-1 [328 kB] Get:68 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libpcre2-8-0 ppc64el 10.48-2 [296 kB] Get:69 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3-zipp all 3.23.0-1 [11.0 kB] Get:70 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libpython3.14 ppc64el 3.14.7-1 [2437 kB] Get:71 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libpython3.14-dev ppc64el 3.14.7-1 [5790 kB] Get:72 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libpython3.14-minimal ppc64el 3.14.7-1 [895 kB] Get:73 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libpython3.14-stdlib ppc64el 3.14.7-1 [2337 kB] Get:74 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3.14 ppc64el 3.14.7-1 [861 kB] Get:75 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3.14-dev ppc64el 3.14.7-1 [516 kB] Get:76 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3.14-minimal ppc64el 3.14.7-1 [2597 kB] Get:77 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el python3-setuptools all 80.9.0-2 [698 kB] Get:78 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el swig ppc64el 4.5.0-3 [1559 kB] Get:79 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libsystemd0 ppc64el 262~rc1-2 [502 kB] Get:80 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el libudev1 ppc64el 262~rc1-2 [147 kB] Get:81 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el tar ppc64el 1.35+dfsg-5 [848 kB] Get:82 http://snapshot.debian.org/archive/debian/20260903T204250Z unstable/main ppc64el xz-utils ppc64el 5.8.3-1 [742 kB] Get:83 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el libxml2-16 ppc64el 2.15.3+dfsg-1+b1 [689 kB] Get:84 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el libsmartcols1 ppc64el 2.42.3-1 [173 kB] Get:85 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el libuuid1 ppc64el 2.42.3-1 [35.2 kB] Get:86 http://snapshot.debian.org/archive/debian/20260905T205002Z unstable/main ppc64el util-linux ppc64el 2.42.3-1 [1338 kB] Fetched 61.0 MB in 0s (151 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/readline-common_8.3-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libstdc++6_16.2.0-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libpython3.14-dev_3.14.7-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/python3.14-dev_3.14.7-1_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libpython3-dev_3.14.7-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libpython3-all-dev_3.14.7-3_ppc64el.deb' dpkg-name: warning: skipping 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'/srv/rebuilderd/tmp/tmpuek9avuz/libmpc3_1.3.1-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libmpfr6_4.2.2-3_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/python3-typeguard_4.4.4-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/python3-jaraco.functools_4.1.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/linux-libc-dev_7.1.12-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libpcre2-8-0_10.48-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/python3-typing-extensions_4.16.0-5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libsystemd0_262~rc1-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/libsframe3_2.47-2_ppc64el.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuek9avuz/man-db_2.13.1-1_ppc64el.deb' dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_ppc64el.deb' to '/srv/rebuilderd/tmp/tmpuek9avuz/zlib1g-dev_1.3.dfsg+really1.3.2-3_ppc64el.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_ppc64el.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_ppc64el.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpqxvyrgyj/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture ppc64el is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU 127.0.0.1 - - [01/Oct/2026 13:06:46] code 404, message File not found 127.0.0.1 - - [01/Oct/2026 13:06:46] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35749 ./ InRelease 127.0.0.1 - - [01/Oct/2026 13:06:46] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:35749 ./ Release [462 B] 127.0.0.1 - - [01/Oct/2026 13:06:46] code 404, message File not found 127.0.0.1 - - [01/Oct/2026 13:06:46] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35749 ./ Release.gpg 127.0.0.1 - - [01/Oct/2026 13:06:46] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:35749 ./ Packages [226 kB] Fetched 226 kB in 0s (9022 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libblkid1_2.42.3-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libmount1_2.42.3-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libsmartcols1_2.42.3-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libudev1_262%7erc1-2_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libuuid1_2.42.3-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./util-linux_2.42.3-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libdebconfclient0_0.283_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./base-passwd_3.6.8_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./init-system-helpers_1.69%2bnmu1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./libc-bin_2.43-4_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./ncurses-base_6.6%2b20260608-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:47] "GET /./sysvinit-utils_3.18-1_ppc64el.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU 127.0.0.1 - - [01/Oct/2026 13:06:49] code 404, message File not found 127.0.0.1 - - [01/Oct/2026 13:06:49] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35749 ./ InRelease 127.0.0.1 - - [01/Oct/2026 13:06:49] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:35749 ./ Release 127.0.0.1 - - [01/Oct/2026 13:06:49] code 404, message File not found 127.0.0.1 - - [01/Oct/2026 13:06:49] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35749 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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- [01/Oct/2026 13:06:58] "GET /./libdpkg-perl_1.23.7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./patch_2.8-2_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./dpkg-dev_1.23.7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./build-essential_12.12_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libdebhelper-perl_14.3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libtool_2.6.2-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./dh-autoreconf_22_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libarchive-zip-perl_1.68-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libfile-stripnondeterminism-perl_1.15.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./dh-strip-nondeterminism_1.15.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libelf1t64_0.196-1_ppc64el.deb HTTP/1.1" 200 - 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127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./zlib1g-dev_1.3.dfsg%2breally1.3.2-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libpython3.14-dev_3.14.7-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libpython3-dev_3.14.7-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libsimde-dev_0.8.4%7erc3-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-jaraco.context_6.0.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-jaraco.functools_4.1.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-typing-extensions_4.16.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-typeguard_4.4.4-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-inflect_7.5.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-jaraco.text_4.0.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libpython3-all-dev_3.14.7-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./dh-python_7.20260623_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./swig_4.5.0-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3.14-dev_3.14.7-1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libjs-sphinxdoc_9.1.0-7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-dev_3.14.7-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libboost1.90-dev_1.90.0-6.1%2bb1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./libboost-dev_1.90.0.2%2bnmu1_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-all_3.14.7-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-all-dev_3.14.7-3_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-zipp_3.23.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./dh-exec_0.31_ppc64el.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-pkg-resources_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./python3-setuptools_80.9.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Oct/2026 13:06:58] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpqxvyrgyj/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU Reading package lists... Building dependency tree... Reading state information... libc-bin is already the newest version (2.43-4). coreutils is already the newest version (9.10-1). libc6 is already the newest version (2.43-4). automake is already the newest version (1:1.18.1-4). automake set to manually installed. libdebconfclient0 is already the newest version (0.283). cpp-16-powerpc64le-linux-gnu is already the newest version (16.2.0-2). cpp-16-powerpc64le-linux-gnu set to manually installed. libblkid1 is already the newest version (2.42.3-1). dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libbinutils is already the newest version (2.47-2). libbinutils set to manually installed. autopoint is already the newest version (1.0-3). autopoint set to manually installed. libattr1 is already the newest version (1:2.6.0-1). g++-16-powerpc64le-linux-gnu is already the newest version (16.2.0-2). g++-16-powerpc64le-linux-gnu set to manually installed. gcc-16-powerpc64le-linux-gnu is already the newest version (16.2.0-2). gcc-16-powerpc64le-linux-gnu set to manually installed. liblsan0 is already the newest version (16.2.0-2). liblsan0 set to manually installed. libcrypt1 is already the newest version (1:4.5.2+20251210-1). gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. g++-16 is already the newest version (16.2.0-2). g++-16 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. libitm1 is already the newest version (16.2.0-2). libitm1 set to manually installed. libboost-dev is already the newest version (1.90.0.2+nmu1). libboost-dev set to manually installed. diffutils is already the newest version (1:3.12-1). liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. autoconf is already the newest version (2.73-2). autoconf set to manually installed. libc-dev-bin is already the newest version (2.43-4). libc-dev-bin set to manually installed. libexpat1-dev is already the newest version (2.8.4-1). libexpat1-dev set to manually installed. libacl1 is already the newest version (2.4.0-1). libmount1 is already the newest version (2.42.3-1). gettext-base is already the newest version (1.0-3). gettext-base set to manually installed. groff-base is already the newest version (1.24.1-1). groff-base set to manually installed. libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. libelf1t64 is already the newest version (0.196-1). libelf1t64 set to manually installed. libmd0 is already the newest version (1.2.0-2). libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. libcap-ng0 is already the newest version (0.9.5-1). libdebhelper-perl is already the newest version (14.3). libdebhelper-perl set to manually installed. libgfortran5 is already the newest version (16.2.0-2). libgfortran5 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. libboost1.90-dev is already the newest version (1.90.0-6.1+b1). libboost1.90-dev set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. libgomp1 is already the newest version (16.2.0-2). libgomp1 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. liblzma5 is already the newest version (5.8.3-1). base-passwd is already the newest version (3.6.8). cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. debconf is already the newest version (1.5.92). architecture-properties is already the newest version (0.2.6+b2). architecture-properties set to manually installed. file is already the newest version (1:5.47-4). file set to manually installed. gcc-powerpc64le-linux-gnu is already the newest version (4:16.1.0-3). gcc-powerpc64le-linux-gnu set to manually installed. libffi8 is already the newest version (3.8.0-2). libffi8 set to manually installed. libgcc-16-dev is already the newest version (16.2.0-2). libgcc-16-dev set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. findutils is already the newest version (4.11.0-2). build-essential is already the newest version (12.12). build-essential set to manually installed. grep is already the newest version (3.12-1). libc6-dev is already the newest version (2.43-4). libc6-dev set to manually installed. dh-python is already the newest version (7.20260623). dh-python set to manually installed. bsdextrautils is already the newest version (2.42.3-1). bsdextrautils set to manually installed. libasan8 is already the newest version (16.2.0-2). libasan8 set to manually installed. init-system-helpers is already the newest version (1.69+nmu1). binutils-common is already the newest version (2.47-2). binutils-common set to manually installed. libexpat1 is already the newest version (2.8.4-1). libexpat1 set to manually installed. cpp-16 is already the newest version (16.2.0-2). cpp-16 set to manually installed. gzip is already the newest version (1.14-1). bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. cpp-powerpc64le-linux-gnu is already the newest version (4:16.1.0-3). cpp-powerpc64le-linux-gnu set to manually installed. gettext is already the newest version (1.0-3). gettext set to manually installed. debianutils is already the newest version (5.24). bash is already the newest version (5.3-3+b1). libctf-nobfd0 is already the newest version (2.47-2). libctf-nobfd0 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b2). libgcc-s1 is already the newest version (16.2.0-2). g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. dash is already the newest version (0.5.12-12). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libctf0 is already the newest version (2.47-2). libctf0 set to manually installed. libjs-sphinxdoc is already the newest version (9.1.0-7). libjs-sphinxdoc set to manually installed. libatomic1 is already the newest version (16.2.0-2). libatomic1 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). dwz is already the newest version (0.17-1). dwz set to manually installed. g++-powerpc64le-linux-gnu is already the newest version (4:16.1.0-3). g++-powerpc64le-linux-gnu set to manually installed. libcc1-0 is already the newest version (16.2.0-2). libcc1-0 set to manually installed. libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. binutils is already the newest version (2.47-2). binutils set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). gcc-16 is already the newest version (16.2.0-2). gcc-16 set to manually installed. debhelper is already the newest version (14.3). debhelper set to manually installed. hostname is already the newest version (3.25). base-files is already the newest version (14.2). intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. binutils-powerpc64le-linux-gnu is already the newest version (2.47-2). binutils-powerpc64le-linux-gnu set to manually installed. gcc-16-base is already the newest version (16.2.0-2). dpkg is already the newest version (1.23.7). libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libc-gconv-modules-extra is already the newest version (2.43-4). readline-common is already the newest version (8.3-4). readline-common set to manually installed. libstdc++6 is already the newest version (16.2.0-2). libstdc++6 set to manually installed. libpython3.14-dev is already the newest version (3.14.7-1). libpython3.14-dev set to manually installed. python3.14-dev is already the newest version (3.14.7-1). python3.14-dev set to manually installed. libpython3-dev is already the newest version (3.14.7-3). libpython3-dev set to manually installed. libpython3-all-dev is already the newest version (3.14.7-3). libpython3-all-dev set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libselinux1 is already the newest version (3.11-2). python3-dev is already the newest version (3.14.7-3). python3-dev set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libperl5.42 is already the newest version (5.42.3-1). libperl5.42 set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. libpython3.14-stdlib is already the newest version (3.14.7-1). libpython3.14-stdlib set to manually installed. libssl3t64 is already the newest version (3.6.4-1). make is already the newest version (4.4.1-3). make set to manually installed. python3-numpy is already the newest version (1:2.4.6+ds-4). python3-numpy set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. tzdata is already the newest version (2026c-1). tzdata set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. tar is already the newest version (1.35+dfsg-5). libtool is already the newest version (2.6.2-2). libtool set to manually installed. libubsan1 is already the newest version (16.2.0-2). libubsan1 set to manually installed. libquadmath0 is already the newest version (16.2.0-2). libquadmath0 set to manually installed. libtsan2 is already the newest version (16.2.0-2). libtsan2 set to manually installed. libstdc++-16-dev is already the newest version (16.2.0-2). libstdc++-16-dev set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3-numpy-dev is already the newest version (1:2.4.6+ds-4). python3-numpy-dev set to manually installed. libpython3.14-minimal is already the newest version (3.14.7-1). libpython3.14-minimal set to manually installed. python3-all-dev is already the newest version (3.14.7-3). python3-all-dev set to manually installed. libpython3-stdlib is already the newest version (3.14.7-3). libpython3-stdlib set to manually installed. swig is already the newest version (4.5.0-3). swig set to manually installed. libpam-runtime is already the newest version (1.7.0-8). python3.14 is already the newest version (3.14.7-1). python3.14 set to manually installed. libsmartcols1 is already the newest version (2.42.3-1). python3 is already the newest version (3.14.7-3). python3 set to manually installed. libpython3.14 is already the newest version (3.14.7-1). libpython3.14 set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). ncurses-base is already the newest version (6.6+20260608-2). python3-inflect is already the newest version (7.5.0-2). python3-inflect set to manually installed. libpam-modules-bin is already the newest version (1.7.0-8). po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. sed is already the newest version (4.9-3). libuuid1 is already the newest version (2.42.3-1). xz-utils is already the newest version (5.8.3-1). xz-utils set to manually installed. perl is already the newest version (5.42.3-1). perl set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. sysvinit-utils is already the newest version (3.18-1). libzstd1 is already the newest version (1.5.7+dfsg-4). libpam-modules is already the newest version (1.7.0-8). libpam0g is already the newest version (1.7.0-8). ncurses-bin is already the newest version (6.6+20260608-2). m4 is already the newest version (1.4.21-1). m4 set to manually installed. libseccomp2 is already the newest version (2.6.1-1). libseccomp2 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). netbase is already the newest version (6.6). netbase set to manually installed. perl-base is already the newest version (5.42.3-1). python3-all is already the newest version (3.14.7-3). python3-all set to manually installed. perl-modules-5.42 is already the newest version (5.42.3-1). perl-modules-5.42 set to manually installed. libxml2-16 is already the newest version (2.15.3+dfsg-1+b1). libxml2-16 set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. openssl-provider-legacy is already the newest version (3.6.4-1). libsimde-dev is already the newest version (0.8.4~rc3-5). libsimde-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. util-linux is already the newest version (2.42.3-1). python3.14-minimal is already the newest version (3.14.7-1). python3.14-minimal set to manually installed. libudev1 is already the newest version (262~rc1-2). python3-more-itertools is already the newest version (11.1.0-2). python3-more-itertools set to manually installed. libsqlite3-0 is already the newest version (3.53.4-2). libsqlite3-0 set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. python3-setuptools is already the newest version (80.9.0-2). python3-setuptools set to manually installed. python3-pkg-resources is already the newest version (80.9.0-2). python3-pkg-resources set to manually installed. python3-minimal is already the newest version (3.14.7-3). python3-minimal set to manually installed. python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. python3-typeguard is already the newest version (4.4.4-3). python3-typeguard set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. linux-libc-dev is already the newest version (7.1.12-1). linux-libc-dev set to manually installed. libpcre2-8-0 is already the newest version (10.48-2). python3-typing-extensions is already the newest version (4.16.0-5). python3-typing-extensions set to manually installed. libsystemd0 is already the newest version (262~rc1-2). libsframe3 is already the newest version (2.47-2). libsframe3 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU (Reading database ... 35993 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.xLhpYQ7wEU... I: success in 56.8474 seconds Downloading packages 1to 100 out of 186 Downloading packages 101to 186 out of 186 env --chdir=/srv/rebuilderd/tmp/rebuilderdNgy6Xc/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767942232 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildX6X0eH/debrebuild.sbuildrc._IYzTrjBl79L sbuild --build=ppc64el --host=ppc64el --arch-any --no-arch-all --binNMU-changelog= consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for ppc64el; no source changes. * Rebuild without Python 3.13 -- ppc64el Build Daemon (ppc64el-conova-01) Fri, 09 Jan 2026 07:03:52 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildX6X0eH/debrebuild.tar.jq9tnWFLjkYZ --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on osuosl7-ppc64el.debian.net +==============================================================================+ | consensuscore 1.1.1+dfsg-9+b2 (ppc64el) Thu, 01 Oct 2026 13:07:43 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-9+b2 Source Version: 1.1.1+dfsg-9 Distribution: unstable Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildX6X0eH/debrebuild.tar.jq9tnWFLjkYZ to /srv/rebuilderd/tmp/tmp.sbuild.GQgJdHZ_6o... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Thu, 01 Oct 2026 13:07:52 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9.dsc exists in /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Thu, 01 Oct 2026 13:07:53 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-QCfgB3/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Thu, 01 Oct 2026 13:07:57 +0000 | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment Thu, 01 Oct 2026 13:07:57 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.111+deb13-powerpc64le-64k #1 SMP Debian 6.12.111-1 (2026-09-28) ppc64el (ppc64le) Toolchain package versions: binutils_2.47-2 dpkg-dev_1.23.7 g++-16_16.2.0-2 gcc-16_16.2.0-2 libc6-dev_2.43-4 libstdc++-16-dev_16.2.0-2 libstdc++6_16.2.0-2 linux-libc-dev_7.1.12-1 Package versions: architecture-properties_0.2.6+b2 autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-3 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3+b1 binutils_2.47-2 binutils-common_2.47-2 binutils-powerpc64le-linux-gnu_2.47-2 bsdextrautils_2.42.3-1 build-essential_12.12 bzip2_1.0.8-6+b2 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-2 cpp-16-powerpc64le-linux-gnu_16.2.0-2 cpp-powerpc64le-linux-gnu_4:16.1.0-3 dash_0.5.12-12 debconf_1.5.92 debhelper_14.3 debianutils_5.24 dh-autoreconf_22 dh-exec_0.31 dh-python_7.20260623 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-2 g++_4:16.1.0-3 g++-16_16.2.0-2 g++-16-powerpc64le-linux-gnu_16.2.0-2 g++-powerpc64le-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-2 gcc-16-base_16.2.0-2 gcc-16-powerpc64le-linux-gnu_16.2.0-2 gcc-powerpc64le-linux-gnu_4:16.1.0-3 gettext_1.0-3 gettext-base_1.0-3 grep_3.12-1 groff-base_1.24.1-1 gzip_1.14-1 hostname_3.25 init-system-helpers_1.69+nmu1 intltool-debian_0.35.0+20060710.6 libacl1_2.4.0-1 libarchive-zip-perl_1.68-1 libasan8_16.2.0-2 libatomic1_16.2.0-2 libattr1_1:2.6.0-1 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.47-2 libblas3_3.12.1-8 libblkid1_2.42.3-1 libboost-dev_1.90.0.2+nmu1 libboost1.90-dev_1.90.0-6.1+b1 libbz2-1.0_1.0.8-6+b2 libc-bin_2.43-4 libc-dev-bin_2.43-4 libc-gconv-modules-extra_2.43-4 libc6_2.43-4 libc6-dev_2.43-4 libcap-ng0_0.9.5-1 libcc1-0_16.2.0-2 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47-2 libctf0_2.47-2 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.3 libdpkg-perl_1.23.7 libelf1t64_0.196-1 libexpat1_2.8.4-1 libexpat1-dev_2.8.4-1 libffi8_3.8.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-16-dev_16.2.0-2 libgcc-s1_16.2.0-2 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgfortran5_16.2.0-2 libgmp10_2:6.3.0+dfsg-5+b2 libgomp1_16.2.0-2 libisl23_0.28-1 libitm1_16.2.0-2 libjansson4_2.15.1-1 libjs-sphinxdoc_9.1.0-7 liblapack3_3.12.1-8 liblsan0_16.2.0-2 liblzma5_5.8.3-1 libmagic-mgc_1:5.47-4 libmagic1t64_1:5.47-4 libmd0_1.2.0-2 libmount1_2.42.3-1 libmpc3_1.3.1-3 libmpfr6_4.2.2-3 libncursesw6_6.6+20260608-2 libpam-modules_1.7.0-8 libpam-modules-bin_1.7.0-8 libpam-runtime_1.7.0-8 libpam0g_1.7.0-8 libpcre2-8-0_10.48-2 libperl5.42_5.42.3-1 libpipeline1_1.5.8-3 libpython3-all-dev_3.14.7-3 libpython3-dev_3.14.7-3 libpython3-stdlib_3.14.7-3 libpython3.14_3.14.7-1 libpython3.14-dev_3.14.7-1 libpython3.14-minimal_3.14.7-1 libpython3.14-stdlib_3.14.7-1 libquadmath0_16.2.0-2 libreadline8t64_8.3-4 libseccomp2_2.6.1-1 libselinux1_3.11-2 libsframe3_2.47-2 libsimde-dev_0.8.4~rc3-5 libsmartcols1_2.42.3-1 libsqlite3-0_3.53.4-2 libssl3t64_3.6.4-1 libstdc++-16-dev_16.2.0-2 libstdc++6_16.2.0-2 libsystemd0_262~rc1-2 libtinfo6_6.6+20260608-2 libtool_2.6.2-2 libtsan2_16.2.0-2 libubsan1_16.2.0-2 libuchardet0_0.0.8-2+b2 libudev1_262~rc1-2 libunistring5_1.4.2-1 libuuid1_2.42.3-1 libxml2-16_2.15.3+dfsg-1+b1 libzstd1_1.5.7+dfsg-4 linux-libc-dev_7.1.12-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260302-1 media-types_14.0.0 ncurses-base_6.6+20260608-2 ncurses-bin_6.6+20260608-2 netbase_6.6 openssl-provider-legacy_3.6.4-1 patch_2.8-2 perl_5.42.3-1 perl-base_5.42.3-1 perl-modules-5.42_5.42.3-1 po-debconf_1.0.22 python3_3.14.7-3 python3-all_3.14.7-3 python3-all-dev_3.14.7-3 python3-autocommand_2.2.2-4 python3-dev_3.14.7-3 python3-inflect_7.5.0-2 python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.14.7-3 python3-more-itertools_11.1.0-2 python3-numpy_1:2.4.6+ds-4 python3-numpy-dev_1:2.4.6+ds-4 python3-pkg-resources_80.9.0-2 python3-setuptools_80.9.0-2 python3-typeguard_4.4.4-3 python3-typing-extensions_4.16.0-5 python3-zipp_3.23.0-1 python3.14_3.14.7-1 python3.14-dev_3.14.7-1 python3.14-minimal_3.14.7-1 readline-common_8.3-4 sed_4.9-3 sensible-utils_0.0.26 swig_4.5.0-3 sysvinit-utils_3.18-1 tar_1.35+dfsg-5 tzdata_2026c-1 util-linux_2.42.3-1 xz-utils_5.8.3-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Thu, 01 Oct 2026 13:07:57 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit [!i386], architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz ac12995d4ce310fb671f720f1229e09aef7f26c2 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 949772e680d176bd186c5326388ebdcf 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmlgqxwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBp7ZhAAvUnjkG3krPpq/gREqdP+b35fjw3OJN8w e0Y94gfMgaqrEBcSAtHOKjMkJQ5GchDLdu88C6OAO2OyIV58rDXaWHYq8YU5RmVK 57GZKb/B4viGxZXtcwyMPz4abCD92wk0FFvQR0h+uFpcAttSM3PF2zdzghFWyu0G 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dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 1.1.1+dfsg-9+b2 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767942232 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-9+b2 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by ppc64el Build Daemon (ppc64el-conova-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-ppc64le' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from src/C++/Quiver/MutationScorer.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from src/C++/Quiver/SimpleRecursor.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:36, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from src/C++/Quiver/ReadScorer.cpp:7: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d In file included from /usr/include/simde/x86/sse3.h:36, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Edna/EdnaEvaluator.hpp:6, from src/C++/Quiver/detail/RecursorBase.cpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::DenseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:221:16: required from here 221 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::ViterbiCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:222:16: required from here 222 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::QvEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:223:16: required from here 223 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp: In instantiation of ‘const ConsensusCore::PairwiseAlignment* ConsensusCore::detail::RecursorBase::Alignment(const E&, const M&) const [with M = ConsensusCore::SparseMatrix; E = ConsensusCore::EdnaEvaluator; C = ConsensusCore::detail::SumProductCombiner]’: src/C++/Quiver/detail/RecursorBase.cpp:224:16: required from here 224 | template class RecursorBase; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/detail/RecursorBase.cpp:94:11: warning: variable ‘pathScore’ set but not used [-Wunused-but-set-variable=] 94 | float pathScore = 0; | ^~~~~~~~~ In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QuiverConsensus.hpp:6, from src/C++/Quiver/QuiverConsensus.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp:6, from src/C++/Quiver/MultiReadMutationScorer.cpp:5: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o In file included from /usr/include/simde/x86/sse3.h:36, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Edna/EdnaEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SseRecursor.hpp:5, from src/C++/Quiver/SseRecursor.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o src/C++/Align/PairwiseAlignment.cpp: In function ‘std::vector ConsensusCore::TargetToQueryPositions(const std::string&)’: src/C++/Align/PairwiseAlignment.cpp:198:9: warning: variable ‘targetPos’ set but not used [-Wunused-but-set-variable=] 198 | int targetPos = 0; | ^~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o In file included from /usr/include/simde/x86/sse3.h:36, from src/C++/Edna/EdnaCounts.cpp:4: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:37: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind.hpp:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (0 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (1 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (2 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (0 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (5 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (5 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (1 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (0 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (0 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/0 (2 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (0 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/1 (2 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (1 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/2 (3 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (0 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/3 (2 ms total) [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (0 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (1 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (0 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (0 ms) [----------] 4 tests from PoaGraph (1 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (1 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (0 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (0 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (0 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (4 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (0 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (351 ms) [----------] 8 tests from PoaConsensus (357 ms total) [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (0 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (63 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (77 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (77 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (44 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (3 ms) [----------] 5 tests from QvEvaluatorTest (266 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (1 ms total) [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (0 ms) [----------] 3 tests from PairwiseAlignmentTests (0 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (4 ms) [----------] 2 tests from AffineAlignmentTests (5 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (0 ms) [----------] 1 test from LinearAlignmentTests (0 ms total) [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (2 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (0 ms) [----------] 4 tests from MutationEnumerationTest (2 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (0 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (0 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (1 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (2 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (0 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/1 (2 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (2 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/2 (3 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (2 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (0 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (2 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (13 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (15 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (15 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (17 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (17 ms) [----------] 5 tests from RecursorFuzzTest/0 (77 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (36 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (36 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (36 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (17 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (17 ms) [----------] 5 tests from RecursorFuzzTest/1 (143 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (48 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (50 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (58 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (17 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (17 ms) [----------] 5 tests from RecursorFuzzTest/2 (191 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (47 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (47 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (48 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (15 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (17 ms) [----------] 5 tests from RecursorFuzzTest/3 (175 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (0 ms) [----------] 1 test from QuiverConfigTableTests (0 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (0 ms) [----------] 3 tests from MutationOrientationTests (0 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (1 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (0 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (1 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (0 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (4 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (1248 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.5.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.5.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/powerpc64le-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:507: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-powerpc64le-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 Possible precedence problem between ! and pattern match (m//) at /usr/bin/dh_numpy3 line 68. dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld64.so.2.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-9+b2_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-10-01T13:12:31Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Thu, 01 Oct 2026 13:12:32 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-9+b2_ppc64el.changes: ---------------------------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 07:03:52 +0000 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Binary-Only: yes Architecture: ppc64el Version: 1.1.1+dfsg-9+b2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: ppc64el Build Daemon (ppc64el-conova-01) Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for ppc64el; no source changes. * Rebuild without Python 3.13 Checksums-Sha1: c6fd1215062103209016097fff29d65315fdc56e 7032 consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo fbda0f8e5d91373e20d8e1408b3fd26c526f95e0 545128 libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb b36c7623a701a8a6951ca2ec430412db6625a9a7 9345124 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb 255cb4da96f3db45e02d45969ae2cd027e11e0cf 762224 python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb Checksums-Sha256: 110cfe4b2a53c10cdbe7162764a66335a1a967513c5fe80970e64f8d5562f3cd 7032 consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo 25894fcf63ff36291f7e40f1f44b7670f931f6cbd955e7385c20787b15b26926 545128 libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb 2bdcc5ffe6e23c794f47d5a9a92dee45238727ad0d6d32930d5084606422a7dc 9345124 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb d28a026ecca7290edbc2d01806321f304d324661a31c463a46d9e41fc07c4f5d 762224 python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb Files: 60181c012f422166eecc9ba59e68adef 7032 science optional consensuscore_1.1.1+dfsg-9+b2_ppc64el.buildinfo be14fa40212e272ff2c38926bb46151a 545128 libdevel optional libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb 931ea9c556dfea854aac001f8a94594a 9345124 debug optional python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb b298faf6aea281864d12d9307af3da9b 762224 python optional python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo Thu, 01 Oct 2026 13:12:32 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: consensuscore (1.1.1+dfsg-9) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Architecture: ppc64el Version: 1.1.1+dfsg-9+b2 Binary-Only-Changes: consensuscore (1.1.1+dfsg-9+b2) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for ppc64el; no source changes. * Rebuild without Python 3.13 . -- ppc64el Build Daemon (ppc64el-conova-01) Fri, 09 Jan 2026 07:03:52 +0000 Checksums-Md5: be14fa40212e272ff2c38926bb46151a 545128 libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb 931ea9c556dfea854aac001f8a94594a 9345124 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb b298faf6aea281864d12d9307af3da9b 762224 python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb Checksums-Sha1: fbda0f8e5d91373e20d8e1408b3fd26c526f95e0 545128 libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb b36c7623a701a8a6951ca2ec430412db6625a9a7 9345124 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb 255cb4da96f3db45e02d45969ae2cd027e11e0cf 762224 python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb Checksums-Sha256: 25894fcf63ff36291f7e40f1f44b7670f931f6cbd955e7385c20787b15b26926 545128 libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb 2bdcc5ffe6e23c794f47d5a9a92dee45238727ad0d6d32930d5084606422a7dc 9345124 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9+b2_ppc64el.deb d28a026ecca7290edbc2d01806321f304d324661a31c463a46d9e41fc07c4f5d 762224 python3-pbconsensuscore_1.1.1+dfsg-9+b2_ppc64el.deb Build-Origin: Debian Build-Architecture: ppc64el Build-Date: Thu, 01 Oct 2026 13:12:31 +0000 Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg Installed-Build-Depends: architecture-properties (= 0.2.6+b2), autoconf (= 2.73-2), automake (= 1:1.18.1-4), autopoint (= 1.0-3), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-3+b1), binutils (= 2.47-2), binutils-common (= 2.47-2), binutils-powerpc64le-linux-gnu (= 2.47-2), bsdextrautils (= 2.42.3-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-16 (= 16.2.0-2), cpp-16-powerpc64le-linux-gnu (= 16.2.0-2), cpp-powerpc64le-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 14.3), debianutils (= 5.24), dh-autoreconf (= 22), dh-exec (= 0.31), dh-python (= 7.20260623), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.11.0-2), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-2), g++-16-powerpc64le-linux-gnu (= 16.2.0-2), g++-powerpc64le-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-16 (= 16.2.0-2), gcc-16-base (= 16.2.0-2), gcc-16-powerpc64le-linux-gnu (= 16.2.0-2), gcc-powerpc64le-linux-gnu (= 4:16.1.0-3), gettext (= 1.0-3), gettext-base (= 1.0-3), grep (= 3.12-1), groff-base (= 1.24.1-1), gzip (= 1.14-1), hostname (= 3.25), init-system-helpers (= 1.69+nmu1), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.4.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.2.0-2), libatomic1 (= 16.2.0-2), libattr1 (= 1:2.6.0-1), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.47-2), libblas3 (= 3.12.1-8), libblkid1 (= 2.42.3-1), libboost-dev (= 1.90.0.2+nmu1), libboost1.90-dev (= 1.90.0-6.1+b1), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.43-4), libc-dev-bin (= 2.43-4), libc-gconv-modules-extra (= 2.43-4), libc6 (= 2.43-4), libc6-dev (= 2.43-4), libcap-ng0 (= 0.9.5-1), libcc1-0 (= 16.2.0-2), libcrypt1 (= 1:4.5.2+20251210-1), libctf-nobfd0 (= 2.47-2), libctf0 (= 2.47-2), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.3), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.196-1), libexpat1 (= 2.8.4-1), libexpat1-dev (= 2.8.4-1), libffi8 (= 3.8.0-2), libfile-stripnondeterminism-perl (= 1.15.1-1), libgcc-16-dev (= 16.2.0-2), libgcc-s1 (= 16.2.0-2), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgfortran5 (= 16.2.0-2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgomp1 (= 16.2.0-2), libisl23 (= 0.28-1), libitm1 (= 16.2.0-2), libjansson4 (= 2.15.1-1), libjs-sphinxdoc (= 9.1.0-7), liblapack3 (= 3.12.1-8), liblsan0 (= 16.2.0-2), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libmount1 (= 2.42.3-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libncursesw6 (= 6.6+20260608-2), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam0g (= 1.7.0-8), libpcre2-8-0 (= 10.48-2), libperl5.42 (= 5.42.3-1), libpipeline1 (= 1.5.8-3), libpython3-all-dev (= 3.14.7-3), libpython3-dev (= 3.14.7-3), libpython3-stdlib (= 3.14.7-3), libpython3.14 (= 3.14.7-1), libpython3.14-dev (= 3.14.7-1), libpython3.14-minimal (= 3.14.7-1), libpython3.14-stdlib (= 3.14.7-1), libquadmath0 (= 16.2.0-2), libreadline8t64 (= 8.3-4), libseccomp2 (= 2.6.1-1), libselinux1 (= 3.11-2), libsframe3 (= 2.47-2), libsimde-dev (= 0.8.4~rc3-5), libsmartcols1 (= 2.42.3-1), libsqlite3-0 (= 3.53.4-2), libssl3t64 (= 3.6.4-1), libstdc++-16-dev (= 16.2.0-2), libstdc++6 (= 16.2.0-2), libsystemd0 (= 262~rc1-2), libtinfo6 (= 6.6+20260608-2), libtool (= 2.6.2-2), libtsan2 (= 16.2.0-2), libubsan1 (= 16.2.0-2), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 262~rc1-2), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42.3-1), libxml2-16 (= 2.15.3+dfsg-1+b1), libzstd1 (= 1.5.7+dfsg-4), linux-libc-dev (= 7.1.12-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), media-types (= 14.0.0), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), netbase (= 6.6), openssl-provider-legacy (= 3.6.4-1), patch (= 2.8-2), perl (= 5.42.3-1), perl-base (= 5.42.3-1), perl-modules-5.42 (= 5.42.3-1), po-debconf (= 1.0.22), python3 (= 3.14.7-3), python3-all (= 3.14.7-3), python3-all-dev (= 3.14.7-3), python3-autocommand (= 2.2.2-4), python3-dev (= 3.14.7-3), python3-inflect (= 7.5.0-2), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.14.7-3), python3-more-itertools (= 11.1.0-2), python3-numpy (= 1:2.4.6+ds-4), python3-numpy-dev (= 1:2.4.6+ds-4), python3-pkg-resources (= 80.9.0-2), python3-setuptools (= 80.9.0-2), python3-typeguard (= 4.4.4-3), python3-typing-extensions (= 4.16.0-5), python3-zipp (= 3.23.0-1), python3.14 (= 3.14.7-1), python3.14-dev (= 3.14.7-1), python3.14-minimal (= 3.14.7-1), readline-common (= 8.3-4), sed (= 4.9-3), sensible-utils (= 0.0.26), swig (= 4.5.0-3), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-5), tzdata (= 2026c-1), util-linux (= 2.42.3-1), xz-utils (= 5.8.3-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1767942232" +------------------------------------------------------------------------------+ | Package contents Thu, 01 Oct 2026 13:12:32 +0000 | +------------------------------------------------------------------------------+ libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb ------------------------------------------------ new Debian package, version 2.0. size 545128 bytes: control archive=2224 bytes. 771 bytes, 18 lines control 4423 bytes, 54 lines md5sums Package: libconsensuscore-dev Source: consensuscore (1.1.1+dfsg-9) Version: 1.1.1+dfsg-9+b2 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 4016 Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. 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Installed-Size: 3674 Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.32), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the Python3 bindings. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/ -rw-r--r-- root/root 2354 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/PKG-INFO -rw-r--r-- root/root 1 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/dependency_links.txt -rw-r--r-- root/root 15 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/top_level.txt -rw-r--r-- root/root 442 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore.py -rw-r--r-- root/root 3734104 2026-01-09 07:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-314-powerpc64le-linux-gnu.so drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/ -rw-r--r-- root/root 821 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.gz -rw-r--r-- root/root 231 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.ppc64el.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/python3-pbconsensuscore/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/python3-pbconsensuscore/copyright +------------------------------------------------------------------------------+ | Post Build Thu, 01 Oct 2026 13:12:34 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Thu, 01 Oct 2026 13:12:34 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Thu, 01 Oct 2026 13:12:36 +0000 | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build Type: any Build-Space: 237636 Build-Time: 272 Distribution: unstable Host Architecture: ppc64el Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdNgy6Xc/inputs/consensuscore_1.1.1+dfsg-9.dsc Machine Architecture: ppc64el Package: consensuscore Package-Time: 288 Source-Version: 1.1.1+dfsg-9 Space: 237636 Status: successful Version: 1.1.1+dfsg-9+b2 -------------------------------------------------------------------------------- Finished at 2026-10-01T13:12:31Z Build needed 00:04:48, 237636k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdNgy6Xc/out checking libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb: size differs for libconsensuscore-dev_1.1.1+dfsg-9+b2_ppc64el.deb