=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3_riscv64.buildinfo Source: r-base Version: 4.5.0-3 rebuilderd-worker node: riscv64-33 +------------------------------------------------------------------------------+ | Downloading sources Wed, 09 Jul 2025 09:48:40 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [168 kB] Get:2 https://deb.debian.org/debian sid InRelease [213 kB] Get:3 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:4 https://deb.debian.org/debian sid/main Sources [11.0 MB] Fetched 21.9 MB in 31s (711 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.dsc' r-base_4.5.0-3.dsc 2906 SHA256:5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0.orig.tar.gz' r-base_4.5.0.orig.tar.gz 40466335 SHA256:3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.debian.tar.xz' r-base_4.5.0-3.debian.tar.xz 100824 SHA256:acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d 3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 r-base_4.5.0.orig.tar.gz acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d r-base_4.5.0-3.debian.tar.xz 5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 r-base_4.5.0-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Wed, 09 Jul 2025 09:49:16 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-base=4.5.0-3 in /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdAWEdSB/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/r-base-4.5.0 I: verifying dsc... successful! Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie InRelease [175 kB] Get:2 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 Packages [9391 kB] Fetched 9566 kB in 6s (1518 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20250510T023717Z/dists/trixie/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libc-bin riscv64 2.41-7 [605 kB] Fetched 605 kB in 0s (8471 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxnbmz6c1/libc-bin_2.41-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bsdutils riscv64 1:2.41-4 [113 kB] Fetched 113 kB in 0s (2000 kB/s) dpkg-name: info: moved 'bsdutils_1%3a2.41-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmph5omdk61/bsdutils_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-glx0 riscv64 1.17.0-2+b1 [123 kB] Fetched 123 kB in 0s (2064 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1jlp40e4/libxcb-glx0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libncursesw6 riscv64 6.5+20250216-2 [141 kB] Fetched 141 kB in 0s (2389 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe85a5z_x/libncursesw6_6.5+20250216-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 mesa-libgallium riscv64 25.0.4-1 [7268 kB] Fetched 7268 kB in 0s (20.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpttt9vapm/mesa-libgallium_25.0.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xfonts-base all 1:1.0.5+nmu1 [5895 kB] Fetched 5895 kB in 0s (12.3 MB/s) dpkg-name: info: moved 'xfonts-base_1%3a1.0.5+nmu1_all.deb' to '/srv/rebuilderd/tmp/tmp5hhwb3n6/xfonts-base_1.0.5+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgirepository-2.0-0 riscv64 2.84.1-2 [141 kB] Fetched 141 kB in 0s (2909 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyfz6lam8/libgirepository-2.0-0_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgnutls-dane0t64 riscv64 3.8.9-2 [453 kB] Fetched 453 kB in 0s (4572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwu9telun/libgnutls-dane0t64_3.8.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 adwaita-icon-theme all 48.0-1 [504 kB] Fetched 504 kB in 0s (3833 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_tfa0fw7/adwaita-icon-theme_48.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxdamage1 riscv64 1:1.1.6-1+b2 [15.3 kB] Fetched 15.3 kB in 0s (333 kB/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.6-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpz4m_qk05/libxdamage1_1.1.6-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 default-jdk-headless riscv64 2:1.21-76 [1124 B] Fetched 1124 B in 0s (10.5 kB/s) dpkg-name: info: moved 'default-jdk-headless_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmpnk__21qk/default-jdk-headless_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libzzip-0-13t64 riscv64 0.13.78+dfsg.1-0.1 [59.6 kB] Fetched 59.6 kB in 0s (2063 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyttu3rlv/libzzip-0-13t64_0.13.78+dfsg.1-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcolord2 riscv64 1.4.7-3 [141 kB] Fetched 141 kB in 0s (1465 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpthkidee9/libcolord2_1.4.7-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxmu6 riscv64 2:1.1.3-3+b4 [58.0 kB] Fetched 58.0 kB in 0s (688 kB/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-3+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpz5ufsoty/libxmu6_1.1.3-3+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libp11-kit-dev riscv64 0.25.5-3 [208 kB] Fetched 208 kB in 0s (3563 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvrwetqp4/libp11-kit-dev_0.25.5-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtiff6 riscv64 4.7.0-3 [342 kB] Fetched 342 kB in 0s (3532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8xztvht6/libtiff6_4.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxpm4 riscv64 1:3.5.17-1+b3 [55.5 kB] Fetched 55.5 kB in 0s (1130 kB/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmps0h6bsjp/libxpm4_3.5.17-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjbig-dev riscv64 2.1-6.1+b2 [51.4 kB] Fetched 51.4 kB in 0s (1007 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwilum7zj/libjbig-dev_2.1-6.1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libc-dev-bin riscv64 2.41-7 [56.5 kB] Fetched 56.5 kB in 0s (1054 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprhn_sbps/libc-dev-bin_2.41-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libldap2 riscv64 2.6.9+dfsg-2 [196 kB] Fetched 196 kB in 0s (3032 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpspj5frjq/libldap2_2.6.9+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 python3.13-minimal riscv64 3.13.3-2 [2163 kB] Fetched 2163 kB in 0s (14.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphg15mlgr/python3.13-minimal_3.13.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libssh2-1t64 riscv64 1.11.1-1 [249 kB] Fetched 249 kB in 0s (3719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwslwc60/libssh2-1t64_1.11.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libatk-bridge2.0-0t64 riscv64 2.56.2-1 [68.7 kB] Fetched 68.7 kB in 0s (1266 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1wp4mrpl/libatk-bridge2.0-0t64_2.56.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpangoxft-1.0-0 riscv64 1.56.3-1 [27.9 kB] Fetched 27.9 kB in 0s (821 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpouqyn1x8/libpangoxft-1.0-0_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgnutls30t64 riscv64 3.8.9-2 [1445 kB] Fetched 1445 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpwq3r42/libgnutls30t64_3.8.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgraphite2-dev riscv64 1.3.14-2+b1 [20.3 kB] Fetched 20.3 kB in 0s (390 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvn7knyhe/libgraphite2-dev_1.3.14-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tk8.6-dev riscv64 8.6.16-1 [1600 kB] Fetched 1600 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphdc_yhe8/tk8.6-dev_8.6.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dpkg riscv64 1.22.18 [1549 kB] Fetched 1549 kB in 0s (9724 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfiqko5ei/dpkg_1.22.18_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-luatex all 2024.20250309-1 [29.1 MB] Fetched 29.1 MB in 2s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkxm4hewn/texlive-luatex_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxi6 riscv64 2:1.8.2-1 [80.2 kB] Fetched 80.2 kB in 0s (968 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpl0rhuowa/libxi6_1.8.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-present0 riscv64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (1346 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3tri_hs/libxcb-present0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgnutls28-dev riscv64 3.8.9-2 [2614 kB] Fetched 2614 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzc77vqh/libgnutls28-dev_3.8.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglib2.0-data all 2.84.1-2 [1284 kB] Fetched 1284 kB in 0s (8141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0su4gsgf/libglib2.0-data_2.84.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libzstd1 riscv64 1.5.7+dfsg-1 [360 kB] Fetched 360 kB in 0s (3767 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp417w9fv7/libzstd1_1.5.7+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwebpdemux2 riscv64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (1509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplk9vtjji/libwebpdemux2_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxkbcommon0 riscv64 1.7.0-2 [112 kB] Fetched 112 kB in 0s (1675 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5l2e49dd/libxkbcommon0_1.7.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libblkid-dev riscv64 2.41-4 [493 kB] Fetched 493 kB in 0s (4466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_xp60mcw/libblkid-dev_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (14.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqn1q9nrv/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpaper-utils riscv64 2.2.5-0.3+b2 [15.9 kB] Fetched 15.9 kB in 0s (187 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu0n8eh0r/libpaper-utils_2.2.5-0.3+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxaw7 riscv64 2:1.0.16-1 [207 kB] Fetched 207 kB in 0s (2434 kB/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_u64zjcx/libxaw7_1.0.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsepol-dev riscv64 3.8.1-1 [995 kB] Fetched 995 kB in 0s (7811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpascod3s3/libsepol-dev_3.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgfortran-14-dev riscv64 14.2.0-19 [1086 kB] Fetched 1086 kB in 0s (8467 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyx23uoxg/libgfortran-14-dev_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpixman-1-0 riscv64 0.44.0-3 [182 kB] Fetched 182 kB in 0s (3437 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb72mejaq/libpixman-1-0_0.44.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcairo2-dev riscv64 1.18.4-1+b1 [43.4 kB] Fetched 43.4 kB in 0s (925 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzz6ct0cg/libcairo2-dev_1.18.4-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 cpp-14 riscv64 14.2.0-19 [1276 B] Fetched 1276 B in 0s (23.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmppv0jiy/cpp-14_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (233 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxaf0vxf4/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkeyutils1 riscv64 1.6.3-6 [9480 B] Fetched 9480 B in 0s (121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3tlrd1z/libkeyutils1_1.6.3-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxt6t64 riscv64 1:1.2.1-1.2+b2 [183 kB] Fetched 183 kB in 0s (2099 kB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.2+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpymi1ba77/libxt6t64_1.2.1-1.2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Fetched 25.2 MB in 1s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpayau65pj/texlive-latex-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libncurses6 riscv64 6.5+20250216-2 [105 kB] Fetched 105 kB in 0s (1254 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp99rdkp4n/libncurses6_6.5+20250216-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnghttp3-dev riscv64 1.8.0-1 [175 kB] Fetched 175 kB in 0s (1635 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4gkwjri/libnghttp3-dev_1.8.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libicu-dev riscv64 76.1-3 [15.2 MB] Fetched 15.2 MB in 1s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg5zyrj8t/libicu-dev_76.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libselinux1 riscv64 3.8.1-1 [88.1 kB] Fetched 88.1 kB in 0s (1573 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0pho38n4/libselinux1_3.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bzip2 riscv64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp20ny75ba/bzip2_1.0.8-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 comerr-dev riscv64 2.1-1.47.2-1+b1 [59.4 kB] Fetched 59.4 kB in 0s (1528 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmk4nw1yg/comerr-dev_2.1-1.47.2-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libx11-6 riscv64 2:1.8.12-1 [817 kB] Fetched 817 kB in 0s (6851 kB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmphdibpgwi/libx11-6_1.8.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkadm5srv-mit12 riscv64 1.21.3-5 [54.9 kB] Fetched 54.9 kB in 0s (602 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyzutrykc/libkadm5srv-mit12_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfontbox-java all 1:1.8.16-5 [211 kB] Fetched 211 kB in 0s (2388 kB/s) dpkg-name: info: moved 'libfontbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpegeougje/libfontbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 librtmp-dev riscv64 2.4+20151223.gitfa8646d.1-2+b5 [118 kB] Fetched 118 kB in 0s (1140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8bzsl40/librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libepoxy0 riscv64 1.5.10-2 [185 kB] Fetched 185 kB in 0s (1949 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgiu6yo46/libepoxy0_1.5.10-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gcc-14-riscv64-linux-gnu riscv64 14.2.0-19 [27.1 MB] Fetched 27.1 MB in 2s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp190s7ejl/gcc-14-riscv64-linux-gnu_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 diffutils riscv64 1:3.10-4 [387 kB] Fetched 387 kB in 0s (11.2 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.10-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpp211dlwx/diffutils_3.10-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglx-mesa0 riscv64 25.0.4-1 [162 kB] Fetched 162 kB in 0s (1688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2_c6w_f/libglx-mesa0_25.0.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 binutils-riscv64-linux-gnu riscv64 2.44-3 [856 kB] Fetched 856 kB in 0s (9450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8li3m6in/binutils-riscv64-linux-gnu_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcsclite1 riscv64 2.3.3-1 [55.8 kB] Fetched 55.8 kB in 0s (1122 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpehh2xuk4/libpcsclite1_2.3.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpam-modules-bin riscv64 1.7.0-3 [49.0 kB] Fetched 49.0 kB in 0s (631 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi82rlmj8/libpam-modules-bin_1.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libasound2-data all 1.2.14-1 [21.1 kB] Fetched 21.1 kB in 0s (184 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6cpeqhqx/libasound2-data_1.2.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (2917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9euk4lp9/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 build-essential riscv64 12.12 [4628 B] Fetched 4628 B in 0s (82.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp33s2a85c/build-essential_12.12_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libuchardet0 riscv64 0.0.8-1+b2 [68.8 kB] Fetched 68.8 kB in 0s (1296 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr9m1r970/libuchardet0_0.0.8-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libicu76 riscv64 76.1-3 [9698 kB] Fetched 9698 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphni79ry9/libicu76_76.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (925 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjxdj7qye/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libvulkan1 riscv64 1.4.309.0-1 [129 kB] Fetched 129 kB in 0s (1516 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpin5v_cid/libvulkan1_1.4.309.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus-daemon riscv64 1.16.2-2 [159 kB] Fetched 159 kB in 0s (1828 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzsydpe1j/dbus-daemon_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (7529 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0gtdfh6m/x11proto-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (1260 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdu78jbt3/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_7ehkx8/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcc1-0 riscv64 14.2.0-19 [40.1 kB] Fetched 40.1 kB in 0s (498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa3bqdram/libcc1-0_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfreetype6 riscv64 2.13.3+dfsg-1 [467 kB] Fetched 467 kB in 0s (6398 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcqcxeh_z/libfreetype6_2.13.3+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgssapi-krb5-2 riscv64 1.21.3-5 [143 kB] Fetched 143 kB in 0s (1555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfwrtwfs5/libgssapi-krb5-2_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libx11-xcb1 riscv64 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (3658 kB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpa15kwtro/libx11-xcb1_1.8.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 man-db riscv64 2.13.0-1 [1407 kB] Fetched 1407 kB in 0s (9332 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmped57cqfn/man-db_2.13.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpotrace0 riscv64 1.16-2+b2 [24.5 kB] Fetched 24.5 kB in 0s (314 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkb3vrclg/libpotrace0_1.16-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gfortran-riscv64-linux-gnu riscv64 4:14.2.0-1 [1284 B] Fetched 1284 B in 0s (24.4 kB/s) dpkg-name: info: moved 'gfortran-riscv64-linux-gnu_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4_rl7g05/gfortran-riscv64-linux-gnu_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libstdc++6 riscv64 14.2.0-19 [707 kB] Fetched 707 kB in 0s (7309 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdg7gagv8/libstdc++6_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libexpat1 riscv64 2.7.1-1 [101 kB] Fetched 101 kB in 0s (973 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzz8_yunl/libexpat1_2.7.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 cpp riscv64 4:14.2.0-1 [1576 B] Fetched 1576 B in 0s (43.0 kB/s) dpkg-name: info: moved 'cpp_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmph4iot4x2/cpp_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 krb5-multidev riscv64 1.21.3-5 [126 kB] Fetched 126 kB in 0s (1525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyq4f616e/krb5-multidev_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsqlite3-0 riscv64 3.46.1-3 [906 kB] Fetched 906 kB in 0s (9980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgk7176b/libsqlite3-0_3.46.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsensors5 riscv64 1:3.6.2-2 [36.9 kB] Fetched 36.9 kB in 0s (1281 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1r6rh_d7/libsensors5_3.6.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtiff-dev riscv64 4.7.0-3 [763 kB] Fetched 763 kB in 0s (9789 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzezkybfy/libtiff-dev_4.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfontenc1 riscv64 1:1.1.8-1+b2 [22.8 kB] Fetched 22.8 kB in 0s (260 kB/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpp1wqw27u/libfontenc1_1.1.8-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7g8zzib/fonts-lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libuuid1 riscv64 2.41-4 [39.7 kB] Fetched 39.7 kB in 0s (1581 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp67moapdz/libuuid1_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-base all 2024.20250309-1 [23.1 MB] Fetched 23.1 MB in 1s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmbekjirl/texlive-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tk8.6 riscv64 8.6.16-1 [69.6 kB] Fetched 69.6 kB in 0s (790 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3z4bpxaq/tk8.6_8.6.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxt-dev riscv64 1:1.2.1-1.2+b2 [624 kB] Fetched 624 kB in 0s (5727 kB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.2+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7s569cq1/libxt-dev_1.2.1-1.2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkrb5-3 riscv64 1.21.3-5 [334 kB] Fetched 334 kB in 0s (3220 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpip3myesh/libkrb5-3_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libproc2-0 riscv64 2:4.0.4-8 [65.7 kB] Fetched 65.7 kB in 0s (1220 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-8_riscv64.deb' to '/srv/rebuilderd/tmp/tmp2nbjtjmz/libproc2-0_4.0.4-8_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-extra-utils all 2024.20250309-2 [67.6 MB] Fetched 67.6 MB in 4s (18.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaqhen4v6/texlive-extra-utils_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libc6 riscv64 2.41-7 [2466 kB] Fetched 2466 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5dbrc603/libc6_2.41-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfontconfig1-dev riscv64 2.15.0-2.3 [269 kB] Fetched 269 kB in 0s (2861 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_gyxsz1y/libfontconfig1-dev_2.15.0-2.3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxkbfile1 riscv64 1:1.1.0-1+b4 [77.4 kB] Fetched 77.4 kB in 0s (916 kB/s) dpkg-name: info: moved 'libxkbfile1_1%3a1.1.0-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7dcfbxu9/libxkbfile1_1.1.0-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwayland-cursor0 riscv64 1.23.1-3 [11.6 kB] Fetched 11.6 kB in 0s (143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp86gwesit/libwayland-cursor0_1.23.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 sensible-utils all 0.0.25 [25.0 kB] Fetched 25.0 kB in 0s (515 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo8h8_m2t/sensible-utils_0.0.25_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dash riscv64 0.5.12-12 [101 kB] Fetched 101 kB in 0s (1577 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9z0z59k8/dash_0.5.12-12_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpng16-16t64 riscv64 1.6.47-1.1 [285 kB] Fetched 285 kB in 0s (3629 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaptedjms/libpng16-16t64_1.6.47-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libldap-dev riscv64 2.6.9+dfsg-2 [581 kB] Fetched 581 kB in 0s (5340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplgv99nag/libldap-dev_2.6.9+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gcc riscv64 4:14.2.0-1 [5132 B] Fetched 5132 B in 0s (72.3 kB/s) dpkg-name: info: moved 'gcc_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp5kd47_of/gcc_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsmartcols1 riscv64 2.41-4 [155 kB] Fetched 155 kB in 0s (2635 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8bgt8eq/libsmartcols1_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsm-dev riscv64 2:1.2.6-1 [58.6 kB] Fetched 58.6 kB in 0s (715 kB/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpuoaeryut/libsm-dev_1.2.6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcairo-gobject2 riscv64 1.18.4-1+b1 [130 kB] Fetched 130 kB in 0s (1691 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnszen9bx/libcairo-gobject2_1.18.4-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz-dev riscv64 10.2.0-1+b1 [145 kB] Fetched 145 kB in 0s (1597 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkpy48x9p/libharfbuzz-dev_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbsd0 riscv64 0.12.2-2 [132 kB] Fetched 132 kB in 0s (1814 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpggqe74jr/libbsd0_0.12.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcre2-32-0 riscv64 10.45-1 [264 kB] Fetched 264 kB in 0s (2467 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcr6aq1nn/libpcre2-32-0_10.45-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxft2 riscv64 2.3.6-1+b4 [53.1 kB] Fetched 53.1 kB in 0s (1072 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbhxiu44/libxft2_2.3.6-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-harfbuzz-0.0 riscv64 10.2.0-1+b1 [42.3 kB] Fetched 42.3 kB in 0s (893 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpok9219cn/gir1.2-harfbuzz-0.0_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnss3 riscv64 2:3.110-1 [1475 kB] Fetched 1475 kB in 0s (8002 kB/s) dpkg-name: info: moved 'libnss3_2%3a3.110-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpxejkfq_f/libnss3_3.110-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtsan2 riscv64 14.2.0-19 [2241 kB] Fetched 2241 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1p594pv9/libtsan2_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gettext-base riscv64 0.23.1-2 [243 kB] Fetched 243 kB in 0s (3342 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpatdew87i/gettext-base_0.23.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpdfbox-java all 1:1.8.16-5 [5527 kB] Fetched 5527 kB in 0s (17.2 MB/s) dpkg-name: info: moved 'libpdfbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmp5tj2jrzt/libpdfbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 rpcsvc-proto riscv64 1.4.3-1+b2 [62.3 kB] Fetched 62.3 kB in 0s (1129 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rj94bpr/rpcsvc-proto_1.4.3-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 init-system-helpers all 1.68 [38.7 kB] Fetched 38.7 kB in 0s (798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mlr9538/init-system-helpers_1.68_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (6528 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphbuu32_i/fonts-dejavu-mono_2.37-8_all.deb' Downloading dependency 1 of 519: libc-bin:riscv64=2.41-7 Downloading dependency 2 of 519: bsdutils:riscv64=1:2.41-4 Downloading dependency 3 of 519: libxcb-glx0:riscv64=1.17.0-2+b1 Downloading dependency 4 of 519: libncursesw6:riscv64=6.5+20250216-2 Downloading dependency 5 of 519: mesa-libgallium:riscv64=25.0.4-1 Downloading dependency 6 of 519: xfonts-base:riscv64=1:1.0.5+nmu1 Downloading dependency 7 of 519: libgirepository-2.0-0:riscv64=2.84.1-2 Downloading dependency 8 of 519: libgnutls-dane0t64:riscv64=3.8.9-2 Downloading dependency 9 of 519: adwaita-icon-theme:riscv64=48.0-1 Downloading dependency 10 of 519: libxdamage1:riscv64=1:1.1.6-1+b2 Downloading dependency 11 of 519: default-jdk-headless:riscv64=2:1.21-76 Downloading dependency 12 of 519: libzzip-0-13t64:riscv64=0.13.78+dfsg.1-0.1 Downloading dependency 13 of 519: libcolord2:riscv64=1.4.7-3 Downloading dependency 14 of 519: libxmu6:riscv64=2:1.1.3-3+b4 Downloading dependency 15 of 519: libp11-kit-dev:riscv64=0.25.5-3 Downloading dependency 16 of 519: libtiff6:riscv64=4.7.0-3 Downloading dependency 17 of 519: libxpm4:riscv64=1:3.5.17-1+b3 Downloading dependency 18 of 519: libjbig-dev:riscv64=2.1-6.1+b2 Downloading dependency 19 of 519: libc-dev-bin:riscv64=2.41-7 Downloading dependency 20 of 519: libldap2:riscv64=2.6.9+dfsg-2 Downloading dependency 21 of 519: python3.13-minimal:riscv64=3.13.3-2 Downloading dependency 22 of 519: libssh2-1t64:riscv64=1.11.1-1 Downloading dependency 23 of 519: libatk-bridge2.0-0t64:riscv64=2.56.2-1 Downloading dependency 24 of 519: libpangoxft-1.0-0:riscv64=1.56.3-1 Downloading dependency 25 of 519: libgnutls30t64:riscv64=3.8.9-2 Downloading dependency 26 of 519: libgraphite2-dev:riscv64=1.3.14-2+b1 Downloading dependency 27 of 519: tk8.6-dev:riscv64=8.6.16-1 Downloading dependency 28 of 519: dpkg:riscv64=1.22.18 Downloading dependency 29 of 519: texlive-luatex:riscv64=2024.20250309-1 Downloading dependency 30 of 519: libxi6:riscv64=2:1.8.2-1 Downloading dependency 31 of 519: libxcb-present0:riscv64=1.17.0-2+b1 Downloading dependency 32 of 519: libgnutls28-dev:riscv64=3.8.9-2 Downloading dependency 33 of 519: libglib2.0-data:riscv64=2.84.1-2 Downloading dependency 34 of 519: libzstd1:riscv64=1.5.7+dfsg-1 Downloading dependency 35 of 519: libwebpdemux2:riscv64=1.5.0-0.1 Downloading dependency 36 of 519: libxkbcommon0:riscv64=1.7.0-2 Downloading dependency 37 of 519: libblkid-dev:riscv64=2.41-4 Downloading dependency 38 of 519: autopoint:riscv64=0.23.1-2 Downloading dependency 39 of 519: libpaper-utils:riscv64=2.2.5-0.3+b2 Downloading dependency 40 of 519: libxaw7:riscv64=2:1.0.16-1 Downloading dependency 41 of 519: libsepol-dev:riscv64=3.8.1-1 Downloading dependency 42 of 519: libgfortran-14-dev:riscv64=14.2.0-19 Downloading dependency 43 of 519: libpixman-1-0:riscv64=0.44.0-3 Downloading dependency 44 of 519: libcairo2-dev:riscv64=1.18.4-1+b1 Downloading dependency 45 of 519: cpp-14:riscv64=14.2.0-19 Downloading dependency 46 of 519: hicolor-icon-theme:riscv64=0.18-2 Downloading dependency 47 of 519: libkeyutils1:riscv64=1.6.3-6 Downloading dependency 48 of 519: libxt6t64:riscv64=1:1.2.1-1.2+b2 Downloading dependency 49 of 519: texlive-latex-extra:riscv64=2024.20250309-2 Downloading dependency 50 of 519: libncurses6:riscv64=6.5+20250216-2 Downloading dependency 51 of 519: libnghttp3-dev:riscv64=1.8.0-1 Downloading dependency 52 of 519: libicu-dev:riscv64=76.1-3 Downloading dependency 53 of 519: libselinux1:riscv64=3.8.1-1 Downloading dependency 54 of 519: bzip2:riscv64=1.0.8-6 Downloading dependency 55 of 519: comerr-dev:riscv64=2.1-1.47.2-1+b1 Downloading dependency 56 of 519: libx11-6:riscv64=2:1.8.12-1 Downloading dependency 57 of 519: libkadm5srv-mit12:riscv64=1.21.3-5 Downloading dependency 58 of 519: libfontbox-java:riscv64=1:1.8.16-5 Downloading dependency 59 of 519: librtmp-dev:riscv64=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 60 of 519: libepoxy0:riscv64=1.5.10-2 Downloading dependency 61 of 519: gcc-14-riscv64-linux-gnu:riscv64=14.2.0-19 Downloading dependency 62 of 519: diffutils:riscv64=1:3.10-4 Downloading dependency 63 of 519: libglx-mesa0:riscv64=25.0.4-1 Downloading dependency 64 of 519: binutils-riscv64-linux-gnu:riscv64=2.44-3 Downloading dependency 65 of 519: libpcsclite1:riscv64=2.3.3-1 Downloading dependency 66 of 519: libpam-modules-bin:riscv64=1.7.0-3 Downloading dependency 67 of 519: libasound2-data:riscv64=1.2.14-1 Downloading dependency 68 of 519: ncurses-base:riscv64=6.5+20250216-2 Downloading dependency 69 of 519: build-essential:riscv64=12.12 Downloading dependency 70 of 519: libuchardet0:riscv64=0.0.8-1+b2 Downloading dependency 71 of 519: libicu76:riscv64=76.1-3 Downloading dependency 72 of 519: libtext-unidecode-perl:riscv64=1.30-3 Downloading dependency 73 of 519: libvulkan1:riscv64=1.4.309.0-1 Downloading dependency 74 of 519: dbus-daemon:riscv64=1.16.2-2 Downloading dependency 75 of 519: x11proto-dev:riscv64=2024.1-1 Downloading dependency 76 of 519: autotools-dev:riscv64=20240727.1 Downloading dependency 77 of 519: intltool-debian:riscv64=0.35.0+20060710.6 Downloading dependency 78 of 519: libcc1-0:riscv64=14.2.0-19 Downloading dependency 79 of 519: libfreetype6:riscv64=2.13.3+dfsg-1 Downloading dependency 80 of 519: libgssapi-krb5-2:riscv64=1.21.3-5 Downloading dependency 81 of 519: libx11-xcb1:riscv64=2:1.8.12-1 Downloading dependency 82 of 519: man-db:riscv64=2.13.0-1 Downloading dependency 83 of 519: libpotrace0:riscv64=1.16-2+b2 Downloading dependency 84 of 519: gfortran-riscv64-linux-gnu:riscv64=4:14.2.0-1 Downloading dependency 85 of 519: libstdc++6:riscv64=14.2.0-19 Downloading dependency 86 of 519: libexpat1:riscv64=2.7.1-1 Downloading dependency 87 of 519: cpp:riscv64=4:14.2.0-1 Downloading dependency 88 of 519: krb5-multidev:riscv64=1.21.3-5 Downloading dependency 89 of 519: libsqlite3-0:riscv64=3.46.1-3 Downloading dependency 90 of 519: libsensors5:riscv64=1:3.6.2-2 Downloading dependency 91 of 519: libtiff-dev:riscv64=4.7.0-3 Downloading dependency 92 of 519: libfontenc1:riscv64=1:1.1.8-1+b2 Downloading dependency 93 of 519: fonts-lmodern:riscv64=2.005-1 Downloading dependency 94 of 519: libuuid1:riscv64=2.41-4 Downloading dependency 95 of 519: texlive-base:riscv64=2024.20250309-1 Downloading dependency 96 of 519: tk8.6:riscv64=8.6.16-1 Downloading dependency 97 of 519: libxt-dev:riscv64=1:1.2.1-1.2+b2 Downloading dependency 98 of 519: libkrb5-3:riscv64=1.21.3-5 Downloading dependency 99 of 519: libproc2-0:riscv64=2:4.0.4-8 Downloading dependency 100 of 519: texlive-extra-utils:riscv64=2024.20250309-2 Downloading dependency 101 of 519: libc6:riscv64=2.41-7 Downloading dependency 102 of 519: libfontconfig1-dev:riscv64=2.15.0-2.3 Downloading dependency 103 of 519: libxkbfile1:riscv64=1:1.1.0-1+b4 Downloading dependency 104 of 519: libwayland-cursor0:riscv64=1.23.1-3 Downloading dependency 105 of 519: sensible-utils:riscv64=0.0.25 Downloading dependency 106 of 519: dash:riscv64=0.5.12-12 Downloading dependency 107 of 519: libpng16-16t64:riscv64=1.6.47-1.1 Downloading dependency 108 of 519: libldap-dev:riscv64=2.6.9+dfsg-2 Downloading dependency 109 of 519: gcc:riscv64=4:14.2.0-1 Downloading dependency 110 of 519: libsmartcols1:riscv64=2.41-4 Downloading dependency 111 of 519: libsm-dev:riscv64=2:1.2.6-1 Downloading dependency 112 of 519: libcairo-gobject2:riscv64=1.18.4-1+b1 Downloading dependency 113 of 519: libharfbuzz-dev:riscv64=10.2.0-1+b1 Downloading dependency 114 of 519: libbsd0:riscv64=0.12.2-2 Downloading dependency 115 of 519: libpcre2-32-0:riscv64=10.45-1 Downloading dependency 116 of 519: libxft2:riscv64=2.3.6-1+b4 Downloading dependency 117 of 519: gir1.2-harfbuzz-0.0:riscv64=10.2.0-1+b1 Downloading dependency 118 of 519: libnss3:riscv64=2:3.110-1 Downloading dependency 119 of 519: libtsan2:riscv64=14.2.0-19 Downloading dependency 120 of 519: gettext-base:riscv64=0.23.1-2 Downloading dependency 121 of 519: libpdfbox-java:riscv64=1:1.8.16-5 Downloading dependency 122 of 519: rpcsvc-proto:riscv64=1.4.3-1+b2 Downloading dependency 123 of 519: init-system-helpers:riscv64=1.68 Downloading dependency 124 of 519: fonts-dejavu-mono:riscv64=2.37-8 Downloading dependency 125 of 519: libxcb-render0:riscv64=1.17.0-2+b1Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-render0 riscv64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (1236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyr82i9d4/libxcb-render0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblerc4 riscv64 4.0.0+ds-5 [181 kB] Fetched 181 kB in 0s (2480 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpibbxw9wm/liblerc4_4.0.0+ds-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xz-utils riscv64 5.8.1-1 [659 kB] Fetched 659 kB in 0s (5838 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpphl2aicm/xz-utils_5.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 binutils-common riscv64 2.44-3 [2509 kB] Fetched 2509 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_vv2xiy/binutils-common_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdeflate0 riscv64 1.23-2 [38.8 kB] Fetched 38.8 kB in 0s (831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphu76hj78/libdeflate0_1.23-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-2+b5 [59.0 kB] Fetched 59.0 kB in 0s (790 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5qae6w3/librtmp1_2.4+20151223.gitfa8646d.1-2+b5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 m4 riscv64 1.4.19-8 [296 kB] Fetched 296 kB in 0s (4862 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpey5t_ia0/m4_1.4.19-8_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bash riscv64 5.2.37-2 [1505 kB] Fetched 1505 kB in 0s (7340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptk73a84k/bash_5.2.37-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libapache-pom-java all 33-2 [5852 B] Fetched 5852 B in 0s (64.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp86inv82n/libapache-pom-java_33-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libblkid1 riscv64 2.41-4 [192 kB] Fetched 192 kB in 0s (1799 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhafkdqs/libblkid1_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnettle8t64 riscv64 3.10.1-1 [335 kB] Fetched 335 kB in 0s (3022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz7s35zrz/libnettle8t64_3.10.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz-subset0 riscv64 10.2.0-1+b1 [620 kB] Fetched 620 kB in 0s (5772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp20nut_uo/libharfbuzz-subset0_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsharpyuv0 riscv64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (1428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj_0887uj/libsharpyuv0_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbinutils riscv64 2.44-3 [520 kB] Fetched 520 kB in 0s (7846 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fqlin63/libbinutils_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 make riscv64 4.4.1-2 [463 kB] Fetched 463 kB in 0s (3524 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphs2edbou/make_4.4.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xauth riscv64 1:1.1.2-1.1 [35.8 kB] Fetched 35.8 kB in 0s (767 kB/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmhln_74t/xauth_1.1.2-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [311 kB] Fetched 311 kB in 0s (3444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmper84wg0f/libgdk-pixbuf2.0-common_2.42.12+dfsg-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbrotli1 riscv64 1.1.0-2+b7 [358 kB] Fetched 358 kB in 0s (3718 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh__hxsy/libbrotli1_1.1.0-2+b7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libperl5.40 riscv64 5.40.1-3 [3926 kB] Fetched 3926 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jghnsfv/libperl5.40_5.40.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dh-autoreconf all 20 [17.1 kB] Fetched 17.1 kB in 0s (348 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaxosajtv/dh-autoreconf_20_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gettext riscv64 0.23.1-2 [1682 kB] Fetched 1682 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzofu1onm/gettext_0.23.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dconf-gsettings-backend riscv64 0.40.0-5 [28.3 kB] Fetched 28.3 kB in 0s (556 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpakols2km/dconf-gsettings-backend_0.40.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwebpmux3 riscv64 1.5.0-0.1 [126 kB] Fetched 126 kB in 0s (1650 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgcwf5efg/libwebpmux3_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 base-files riscv64 13.7 [72.9 kB] Fetched 72.9 kB in 0s (854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpphnkriar/base-files_13.7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (319 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpt0p2u0n3/libsensors-config_3.6.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmime-charset-perl all 1.013.1-2 [34.0 kB] Fetched 34.0 kB in 0s (322 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5gvcw3ld/libmime-charset-perl_1.013.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libptexenc1 riscv64 2024.20240313.70630+ds-6 [49.5 kB] Fetched 49.5 kB in 0s (590 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapl7iso7/libptexenc1_2024.20240313.70630+ds-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texinfo-lib riscv64 7.1.1-1+b1 [231 kB] Fetched 231 kB in 0s (2386 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3hwxs5qh/texinfo-lib_7.1.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgnutls-openssl27t64 riscv64 3.8.9-2 [453 kB] Fetched 453 kB in 0s (9333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpas5v3fzn/libgnutls-openssl27t64_3.8.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libx11-dev riscv64 2:1.8.12-1 [1408 kB] Fetched 1408 kB in 0s (8955 kB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp2sd1h_kn/libx11-dev_1.8.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 pkgconf riscv64 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (284 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc336btb7/pkgconf_1.8.1-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtasn1-6-dev riscv64 4.20.0-2 [149 kB] Fetched 149 kB in 0s (2427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbi8g2pqu/libtasn1-6-dev_4.20.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 procps riscv64 2:4.0.4-8 [880 kB] Fetched 880 kB in 0s (5622 kB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-8_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4wek0_wq/procps_4.0.4-8_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkpathsea6 riscv64 2024.20240313.70630+ds-6 [157 kB] Fetched 157 kB in 0s (1780 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparq9m813/libkpathsea6_2024.20240313.70630+ds-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwayland-server0 riscv64 1.23.1-3 [34.6 kB] Fetched 34.6 kB in 0s (346 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdvx8vd9p/libwayland-server0_1.23.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 lmodern all 2.005-1 [9480 kB] Fetched 9480 kB in 1s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoc0d1o7c/lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libselinux1-dev riscv64 3.8.1-1 [303 kB] Fetched 303 kB in 0s (3082 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1hcuby6t/libselinux1-dev_3.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (3896 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3lpgi7lr/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb1-dev riscv64 1.17.0-2+b1 [241 kB] Fetched 241 kB in 0s (2552 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcvqew3b/libxcb1-dev_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxinerama1 riscv64 2:1.1.4-3+b4 [16.0 kB] Fetched 16.0 kB in 0s (203 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmps4jibr7q/libxinerama1_1.1.4-3+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 ucf all 3.0051 [42.8 kB] Fetched 42.8 kB in 0s (544 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprani59gy/ucf_3.0051_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxext6 riscv64 2:1.3.4-1+b3 [51.7 kB] Fetched 51.7 kB in 0s (666 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmphi_cuweg/libxext6_1.3.4-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcomposite1 riscv64 1:0.4.6-1 [16.3 kB] Fetched 16.3 kB in 0s (212 kB/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpis41qzga/libxcomposite1_0.4.6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbz2-dev riscv64 1.0.8-6 [69.9 kB] Fetched 69.9 kB in 0s (2659 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl7exojyy/libbz2-dev_1.0.8-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwayland-client0 riscv64 1.23.1-3 [26.9 kB] Fetched 26.9 kB in 0s (1142 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ium3a28/libwayland-client0_1.23.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxau-dev riscv64 1:1.0.11-1 [27.6 kB] Fetched 27.6 kB in 0s (341 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpzvbsq4p7/libxau-dev_1.0.11-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libctf-nobfd0 riscv64 2.44-3 [163 kB] Fetched 163 kB in 0s (2757 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5q0tcn2/libctf-nobfd0_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libstdc++-14-dev riscv64 14.2.0-19 [5276 kB] Fetched 5276 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4fejknm/libstdc++-14-dev_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblastlog2-2 riscv64 2.41-4 [28.4 kB] Fetched 28.4 kB in 0s (734 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpszq6pgss/liblastlog2-2_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpam-systemd riscv64 257.5-2 [297 kB] Fetched 297 kB in 0s (3000 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6dim7hgv/libpam-systemd_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpangocairo-1.0-0 riscv64 1.56.3-1 [34.7 kB] Fetched 34.7 kB in 0s (708 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1a0yifld/libpangocairo-1.0-0_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdconf1 riscv64 0.40.0-5 [41.2 kB] Fetched 41.2 kB in 0s (786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3xtqvlvp/libdconf1_0.40.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglib2.0-bin riscv64 2.84.1-2 [126 kB] Fetched 126 kB in 0s (1394 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp13dd0_er/libglib2.0-bin_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gcc-riscv64-linux-gnu riscv64 4:14.2.0-1 [1432 B] Fetched 1432 B in 0s (22.7 kB/s) dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp5318r9bd/gcc-riscv64-linux-gnu_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 perl-base riscv64 5.40.1-3 [1662 kB] Fetched 1662 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4sfkgy2l/perl-base_5.40.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 fontconfig riscv64 2.15.0-2.3 [462 kB] Fetched 462 kB in 0s (6115 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp76_2qfmh/fontconfig_2.15.0-2.3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (180 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpedqcb5dm/libfile-which-perl_1.27-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB] Fetched 40.3 kB in 0s (772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1jf49g4_/libbz2-1.0_1.0.8-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tex-common all 6.19 [29.4 kB] Fetched 29.4 kB in 0s (334 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp24lap3e2/tex-common_6.19_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libidn2-dev riscv64 2.3.8-2 [135 kB] Fetched 135 kB in 0s (1840 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprby71399/libidn2-dev_2.3.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsepol2 riscv64 3.8.1-1 [304 kB] Fetched 304 kB in 0s (3218 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnviirakj/libsepol2_3.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bash-completion all 1:2.16.0-7 [319 kB] Fetched 319 kB in 0s (3192 kB/s) dpkg-name: info: moved 'bash-completion_1%3a2.16.0-7_all.deb' to '/srv/rebuilderd/tmp/tmpymxkmhrm/bash-completion_2.16.0-7_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libblas3 riscv64 3.12.1-2 [123 kB] Fetched 123 kB in 0s (1141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_c7hrfk/libblas3_3.12.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus-session-bus-common all 1.16.2-2 [52.3 kB] Fetched 52.3 kB in 0s (1091 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppr55_98e/dbus-session-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xfonts-utils riscv64 1:7.7+7 [91.9 kB] Fetched 91.9 kB in 0s (995 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_riscv64.deb' to '/srv/rebuilderd/tmp/tmpra4zqlgq/xfonts-utils_7.7+7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtinfo6 riscv64 6.5+20250216-2 [347 kB] Fetched 347 kB in 0s (3616 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi803vck_/libtinfo6_6.5+20250216-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgdk-pixbuf-2.0-0 riscv64 2.42.12+dfsg-2 [140 kB] Fetched 140 kB in 0s (1672 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2g__zo8/libgdk-pixbuf-2.0-0_2.42.12+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtexlua53-5 riscv64 2024.20240313.70630+ds-6 [114 kB] Fetched 114 kB in 0s (1200 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k5786t0/libtexlua53-5_2024.20240313.70630+ds-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b1 [182 kB] Fetched 182 kB in 0s (3170 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiroohadx/libevent-2.1-7t64_2.1.12-stable-10+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libaudit1 riscv64 1:4.0.2-2+b2 [54.1 kB] Fetched 54.1 kB in 0s (671 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.0.2-2+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpfx2mkh2w/libaudit1_4.0.2-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (824 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98862ex0/python3-packaging_25.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgmpxx4ldbl riscv64 2:6.3.0+dfsg-3 [329 kB] Fetched 329 kB in 0s (3035 kB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp8neis1na/libgmpxx4ldbl_6.3.0+dfsg-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 sed riscv64 4.9-2 [329 kB] Fetched 329 kB in 0s (4396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppo9mxkpt/sed_4.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tcl8.6-dev riscv64 8.6.16+dfsg-1 [2264 kB] Fetched 2264 kB in 0s (7854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4y7n4tb/tcl8.6-dev_8.6.16+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openssl-provider-legacy riscv64 3.5.0-1 [307 kB] Fetched 307 kB in 0s (4936 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3x4pbiny/openssl-provider-legacy_3.5.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 debhelper all 13.24.2 [919 kB] Fetched 919 kB in 0s (6822 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppv357ic9/debhelper_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfontconfig1 riscv64 2.15.0-2.3 [398 kB] Fetched 398 kB in 0s (5830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_k0i3k4/libfontconfig1_2.15.0-2.3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpam-runtime all 1.7.0-3 [248 kB] Fetched 248 kB in 0s (2584 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcqkvjyzk/libpam-runtime_1.7.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsframe1 riscv64 2.44-3 [79.1 kB] Fetched 79.1 kB in 0s (1341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqsvmvxb3/libsframe1_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dpkg-dev all 1.22.18 [1338 kB] Fetched 1338 kB in 0s (7617 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp69h5nrkp/dpkg-dev_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgio-2.0-dev-bin riscv64 2.84.1-2 [164 kB] Fetched 164 kB in 0s (1565 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjtoi5r9y/libgio-2.0-dev-bin_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 x11-xkb-utils riscv64 7.7+9 [158 kB] Fetched 158 kB in 0s (1742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf74v_4iz/x11-xkb-utils_7.7+9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 x11proto-core-dev all 2024.1-1 [3312 B] Fetched 3312 B in 0s (38.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy51dse8d/x11proto-core-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdatrie-dev riscv64 0.2.13-3+b1 [38.3 kB] Fetched 38.3 kB in 0s (485 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi_qstl6q/libdatrie-dev_0.2.13-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpython3-stdlib riscv64 3.13.3-1 [10.2 kB] Fetched 10.2 kB in 0s (85.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53rd6zqg/libpython3-stdlib_3.13.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblapack3 riscv64 3.12.1-2 [1993 kB] Fetched 1993 kB in 0s (6777 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdk4v3f1i/liblapack3_3.12.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcom-err2 riscv64 1.47.2-1+b1 [24.0 kB] Fetched 24.0 kB in 0s (243 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjhk10r0k/libcom-err2_1.47.2-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsombok3 riscv64 2.4.0-2+b2 [32.3 kB] Fetched 32.3 kB in 0s (270 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3oesvqzr/libsombok3_2.4.0-2+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxml-libxml-perl riscv64 2.0207+dfsg+really+2.0134-5+b2 [314 kB] Fetched 314 kB in 0s (3279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwro4k30o/libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-freedesktop riscv64 1.84.0-1 [60.5 kB] Fetched 60.5 kB in 0s (828 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpocc1tbq2/gir1.2-freedesktop_1.84.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgbm1 riscv64 25.0.4-1 [45.5 kB] Fetched 45.5 kB in 0s (454 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppp3gkfq1/libgbm1_25.0.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libffi8 riscv64 3.4.8-2 [21.7 kB] Fetched 21.7 kB in 0s (277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcsks87nx/libffi8_3.4.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-render0-dev riscv64 1.17.0-2+b1 [131 kB] Fetched 131 kB in 0s (1681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp50onjq71/libxcb-render0-dev_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtirpc-common all 1.3.6+ds-1 [11.0 kB] Fetched 11.0 kB in 0s (230 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptd4zjx32/libtirpc-common_1.3.6+ds-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglx0 riscv64 1.7.0-1+b2 [30.8 kB] Fetched 30.8 kB in 0s (355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpprzf2qf5/libglx0_1.7.0-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsystemd-shared riscv64 257.5-2 [2135 kB] Fetched 2135 kB in 0s (9376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51aq9oh8/libsystemd-shared_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gzip riscv64 1.13-1 [139 kB] Fetched 139 kB in 0s (2008 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj57fr4a_/gzip_1.13-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmount1 riscv64 2.41-4 [226 kB] Fetched 226 kB in 0s (7762 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsnibm4zy/libmount1_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 default-jre-headless riscv64 2:1.21-76 [3196 B] Fetched 3196 B in 0s (25.8 kB/s) dpkg-name: info: moved 'default-jre-headless_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmpo6ryywp2/default-jre-headless_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmpc3 riscv64 1.3.1-1+b3 [56.7 kB] Fetched 56.7 kB in 0s (880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6vuq1jtj/libmpc3_1.3.1-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgio-2.0-dev riscv64 2.84.1-2 [4039 kB] Fetched 4039 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1nnczn5w/libgio-2.0-dev_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libctf0 riscv64 2.44-3 [96.1 kB] Fetched 96.1 kB in 0s (2423 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4sr9q75m/libctf0_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dconf-service riscv64 0.40.0-5 [32.2 kB] Fetched 32.2 kB in 0s (656 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1xzy5jj/dconf-service_0.40.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 default-jdk riscv64 2:1.21-76 [1080 B] Fetched 1080 B in 0s (14.1 kB/s) dpkg-name: info: moved 'default-jdk_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmpr810hl8n/default-jdk_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 pkgconf-bin riscv64 1.8.1-4 [29.8 kB] Fetched 29.8 kB in 0s (317 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesxel36q/pkgconf-bin_1.8.1-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcre2-posix3 riscv64 10.45-1 [63.3 kB] Fetched 63.3 kB in 0s (796 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprpzwsqzv/libpcre2-posix3_10.45-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (7794 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphxgcvdcu/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfontconfig-dev riscv64 2.15.0-2.3 [604 kB] Fetched 604 kB in 0s (5178 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyjssc6gd/libfontconfig-dev_2.15.0-2.3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxdmcp6 riscv64 1:1.1.5-1 [28.0 kB] Fetched 28.0 kB in 0s (355 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp47pah2p7/libxdmcp6_1.1.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bison riscv64 2:3.8.2+dfsg-1+b2 [1166 kB] Fetched 1166 kB in 0s (6465 kB/s) dpkg-name: info: moved 'bison_2%3a3.8.2+dfsg-1+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_fpcz563/bison_3.8.2+dfsg-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpixman-1-dev riscv64 0.44.0-3 [11.4 kB] Fetched 11.4 kB in 0s (148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqnlui3sl/libpixman-1-dev_0.44.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 shared-mime-info riscv64 2.4-5+b2 [758 kB] Fetched 758 kB in 0s (3531 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xdog585/shared-mime-info_2.4-5+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libice6 riscv64 2:1.1.1-1 [64.8 kB] Fetched 64.8 kB in 0s (1001 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpurzl7h3j/libice6_1.1.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 preview-latex-style all 13.2-1 [350 kB] Fetched 350 kB in 0s (4980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoj7m1l14/preview-latex-style_13.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmagic1t64 riscv64 1:5.46-5 [117 kB] Fetched 117 kB in 0s (2152 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpua4_cawm/libmagic1t64_5.46-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tzdata all 2025b-2 [260 kB] Fetched 260 kB in 0s (2535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpab2q3fju/tzdata_2025b-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (2155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1v00urje/ca-certificates_20250419_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsysprof-capture-4-dev riscv64 48.0-2 [112 kB] Fetched 112 kB in 0s (1401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsn9cev80/libsysprof-capture-4-dev_48.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xvfb riscv64 2:21.1.16-1 [3240 kB] Fetched 3240 kB in 0s (14.3 MB/s) dpkg-name: info: moved 'xvfb_2%3a21.1.16-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmphxpf_2ce/xvfb_21.1.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcloudproviders0 riscv64 0.3.6-2 [27.8 kB] Fetched 27.8 kB in 0s (306 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefzei7gn/libcloudproviders0_0.3.6-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblsan0 riscv64 14.2.0-19 [1078 kB] Fetched 1078 kB in 0s (8966 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5r9k2rip/liblsan0_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 icu-devtools riscv64 76.1-3 [210 kB] Fetched 210 kB in 0s (3330 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2fr5gxz/icu-devtools_76.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxss-dev riscv64 1:1.2.3-1+b3 [26.2 kB] Fetched 26.2 kB in 0s (312 kB/s) dpkg-name: info: moved 'libxss-dev_1%3a1.2.3-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp6al8l646/libxss-dev_1.2.3-1+b3_riscv64.deb' Downloading dependency 126 of 519: liblerc4:riscv64=4.0.0+ds-5 Downloading dependency 127 of 519: xz-utils:riscv64=5.8.1-1 Downloading dependency 128 of 519: binutils-common:riscv64=2.44-3 Downloading dependency 129 of 519: libdeflate0:riscv64=1.23-2 Downloading dependency 130 of 519: librtmp1:riscv64=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 131 of 519: m4:riscv64=1.4.19-8 Downloading dependency 132 of 519: bash:riscv64=5.2.37-2 Downloading dependency 133 of 519: libapache-pom-java:riscv64=33-2 Downloading dependency 134 of 519: libblkid1:riscv64=2.41-4 Downloading dependency 135 of 519: libnettle8t64:riscv64=3.10.1-1 Downloading dependency 136 of 519: libharfbuzz-subset0:riscv64=10.2.0-1+b1 Downloading dependency 137 of 519: libsharpyuv0:riscv64=1.5.0-0.1 Downloading dependency 138 of 519: libbinutils:riscv64=2.44-3 Downloading dependency 139 of 519: make:riscv64=4.4.1-2 Downloading dependency 140 of 519: xauth:riscv64=1:1.1.2-1.1 Downloading dependency 141 of 519: libgdk-pixbuf2.0-common:riscv64=2.42.12+dfsg-2 Downloading dependency 142 of 519: libbrotli1:riscv64=1.1.0-2+b7 Downloading dependency 143 of 519: libperl5.40:riscv64=5.40.1-3 Downloading dependency 144 of 519: dh-autoreconf:riscv64=20 Downloading dependency 145 of 519: gettext:riscv64=0.23.1-2 Downloading dependency 146 of 519: dconf-gsettings-backend:riscv64=0.40.0-5 Downloading dependency 147 of 519: libwebpmux3:riscv64=1.5.0-0.1 Downloading dependency 148 of 519: base-files:riscv64=13.7 Downloading dependency 149 of 519: libsensors-config:riscv64=1:3.6.2-2 Downloading dependency 150 of 519: libmime-charset-perl:riscv64=1.013.1-2 Downloading dependency 151 of 519: libptexenc1:riscv64=2024.20240313.70630+ds-6 Downloading dependency 152 of 519: texinfo-lib:riscv64=7.1.1-1+b1 Downloading dependency 153 of 519: libgnutls-openssl27t64:riscv64=3.8.9-2 Downloading dependency 154 of 519: libx11-dev:riscv64=2:1.8.12-1 Downloading dependency 155 of 519: pkgconf:riscv64=1.8.1-4 Downloading dependency 156 of 519: libtasn1-6-dev:riscv64=4.20.0-2 Downloading dependency 157 of 519: procps:riscv64=2:4.0.4-8 Downloading dependency 158 of 519: libkpathsea6:riscv64=2024.20240313.70630+ds-6 Downloading dependency 159 of 519: libwayland-server0:riscv64=1.23.1-3 Downloading dependency 160 of 519: lmodern:riscv64=2.005-1 Downloading dependency 161 of 519: libselinux1-dev:riscv64=3.8.1-1 Downloading dependency 162 of 519: po-debconf:riscv64=1.0.21+nmu1 Downloading dependency 163 of 519: libxcb1-dev:riscv64=1.17.0-2+b1 Downloading dependency 164 of 519: libxinerama1:riscv64=2:1.1.4-3+b4 Downloading dependency 165 of 519: ucf:riscv64=3.0051 Downloading dependency 166 of 519: libxext6:riscv64=2:1.3.4-1+b3 Downloading dependency 167 of 519: libxcomposite1:riscv64=1:0.4.6-1 Downloading dependency 168 of 519: libbz2-dev:riscv64=1.0.8-6 Downloading dependency 169 of 519: libwayland-client0:riscv64=1.23.1-3 Downloading dependency 170 of 519: libxau-dev:riscv64=1:1.0.11-1 Downloading dependency 171 of 519: libctf-nobfd0:riscv64=2.44-3 Downloading dependency 172 of 519: libstdc++-14-dev:riscv64=14.2.0-19 Downloading dependency 173 of 519: liblastlog2-2:riscv64=2.41-4 Downloading dependency 174 of 519: libpam-systemd:riscv64=257.5-2 Downloading dependency 175 of 519: libpangocairo-1.0-0:riscv64=1.56.3-1 Downloading dependency 176 of 519: libdconf1:riscv64=0.40.0-5 Downloading dependency 177 of 519: libglib2.0-bin:riscv64=2.84.1-2 Downloading dependency 178 of 519: gcc-riscv64-linux-gnu:riscv64=4:14.2.0-1 Downloading dependency 179 of 519: perl-base:riscv64=5.40.1-3 Downloading dependency 180 of 519: fontconfig:riscv64=2.15.0-2.3 Downloading dependency 181 of 519: libfile-which-perl:riscv64=1.27-2 Downloading dependency 182 of 519: libbz2-1.0:riscv64=1.0.8-6 Downloading dependency 183 of 519: tex-common:riscv64=6.19 Downloading dependency 184 of 519: libidn2-dev:riscv64=2.3.8-2 Downloading dependency 185 of 519: libsepol2:riscv64=3.8.1-1 Downloading dependency 186 of 519: bash-completion:riscv64=1:2.16.0-7 Downloading dependency 187 of 519: libblas3:riscv64=3.12.1-2 Downloading dependency 188 of 519: dbus-session-bus-common:riscv64=1.16.2-2 Downloading dependency 189 of 519: xfonts-utils:riscv64=1:7.7+7 Downloading dependency 190 of 519: libtinfo6:riscv64=6.5+20250216-2 Downloading dependency 191 of 519: libgdk-pixbuf-2.0-0:riscv64=2.42.12+dfsg-2 Downloading dependency 192 of 519: libtexlua53-5:riscv64=2024.20240313.70630+ds-6 Downloading dependency 193 of 519: libevent-2.1-7t64:riscv64=2.1.12-stable-10+b1 Downloading dependency 194 of 519: libaudit1:riscv64=1:4.0.2-2+b2 Downloading dependency 195 of 519: python3-packaging:riscv64=25.0-1 Downloading dependency 196 of 519: libgmpxx4ldbl:riscv64=2:6.3.0+dfsg-3 Downloading dependency 197 of 519: sed:riscv64=4.9-2 Downloading dependency 198 of 519: tcl8.6-dev:riscv64=8.6.16+dfsg-1 Downloading dependency 199 of 519: openssl-provider-legacy:riscv64=3.5.0-1 Downloading dependency 200 of 519: debhelper:riscv64=13.24.2 Downloading dependency 201 of 519: libfontconfig1:riscv64=2.15.0-2.3 Downloading dependency 202 of 519: libpam-runtime:riscv64=1.7.0-3 Downloading dependency 203 of 519: libsframe1:riscv64=2.44-3 Downloading dependency 204 of 519: dpkg-dev:riscv64=1.22.18 Downloading dependency 205 of 519: libgio-2.0-dev-bin:riscv64=2.84.1-2 Downloading dependency 206 of 519: x11-xkb-utils:riscv64=7.7+9 Downloading dependency 207 of 519: x11proto-core-dev:riscv64=2024.1-1 Downloading dependency 208 of 519: libdatrie-dev:riscv64=0.2.13-3+b1 Downloading dependency 209 of 519: libpython3-stdlib:riscv64=3.13.3-1 Downloading dependency 210 of 519: liblapack3:riscv64=3.12.1-2 Downloading dependency 211 of 519: libcom-err2:riscv64=1.47.2-1+b1 Downloading dependency 212 of 519: libsombok3:riscv64=2.4.0-2+b2 Downloading dependency 213 of 519: libxml-libxml-perl:riscv64=2.0207+dfsg+really+2.0134-5+b2 Downloading dependency 214 of 519: gir1.2-freedesktop:riscv64=1.84.0-1 Downloading dependency 215 of 519: libgbm1:riscv64=25.0.4-1 Downloading dependency 216 of 519: libffi8:riscv64=3.4.8-2 Downloading dependency 217 of 519: libxcb-render0-dev:riscv64=1.17.0-2+b1 Downloading dependency 218 of 519: libtirpc-common:riscv64=1.3.6+ds-1 Downloading dependency 219 of 519: libglx0:riscv64=1.7.0-1+b2 Downloading dependency 220 of 519: libsystemd-shared:riscv64=257.5-2 Downloading dependency 221 of 519: gzip:riscv64=1.13-1 Downloading dependency 222 of 519: libmount1:riscv64=2.41-4 Downloading dependency 223 of 519: default-jre-headless:riscv64=2:1.21-76 Downloading dependency 224 of 519: libmpc3:riscv64=1.3.1-1+b3 Downloading dependency 225 of 519: libgio-2.0-dev:riscv64=2.84.1-2 Downloading dependency 226 of 519: libctf0:riscv64=2.44-3 Downloading dependency 227 of 519: dconf-service:riscv64=0.40.0-5 Downloading dependency 228 of 519: default-jdk:riscv64=2:1.21-76 Downloading dependency 229 of 519: pkgconf-bin:riscv64=1.8.1-4 Downloading dependency 230 of 519: libpcre2-posix3:riscv64=10.45-1 Downloading dependency 231 of 519: fonts-dejavu-core:riscv64=2.37-8 Downloading dependency 232 of 519: libfontconfig-dev:riscv64=2.15.0-2.3 Downloading dependency 233 of 519: libxdmcp6:riscv64=1:1.1.5-1 Downloading dependency 234 of 519: bison:riscv64=2:3.8.2+dfsg-1+b2 Downloading dependency 235 of 519: libpixman-1-dev:riscv64=0.44.0-3 Downloading dependency 236 of 519: shared-mime-info:riscv64=2.4-5+b2 Downloading dependency 237 of 519: libice6:riscv64=2:1.1.1-1 Downloading dependency 238 of 519: preview-latex-style:riscv64=13.2-1 Downloading dependency 239 of 519: libmagic1t64:riscv64=1:5.46-5 Downloading dependency 240 of 519: tzdata:riscv64=2025b-2 Downloading dependency 241 of 519: ca-certificates:riscv64=20250419 Downloading dependency 242 of 519: libsysprof-capture-4-dev:riscv64=48.0-2 Downloading dependency 243 of 519: xvfb:riscv64=2:21.1.16-1 Downloading dependency 244 of 519: libcloudproviders0:riscv64=0.3.6-2 Downloading dependency 245 of 519: liblsan0:riscv64=14.2.0-19 Downloading dependency 246 of 519: icu-devtools:riscv64=76.1-3 Downloading dependency 247 of 519: libxss-dev:riscv64=1:1.2.3-1+b3 Downloading dependency 248 of 519: zlib1g-dev:riscv64=1:1.3.dfsg+really1.3.1-1+b1Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Fetched 978 kB in 0s (7022 kB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmptp979td2/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 nettle-dev riscv64 3.10.1-1 [1523 kB] Fetched 1523 kB in 0s (9125 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9shmua4/nettle-dev_3.10.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkadm5clnt-mit12 riscv64 1.21.3-5 [42.2 kB] Fetched 42.2 kB in 0s (535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpncaeauzm/libkadm5clnt-mit12_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus-user-session riscv64 1.16.2-2 [52.1 kB] Fetched 52.1 kB in 0s (659 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprp21wev0/dbus-user-session_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libthai-dev riscv64 0.1.29-2+b1 [42.3 kB] Fetched 42.3 kB in 0s (698 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphho14edn/libthai-dev_0.1.29-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-glib-2.0-dev riscv64 2.84.1-2 [914 kB] Fetched 914 kB in 0s (6968 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpudcfj3ve/gir1.2-glib-2.0-dev_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libunicode-linebreak-perl riscv64 0.0.20190101-1+b4 [96.7 kB] Fetched 96.7 kB in 0s (1165 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwu1qt590/libunicode-linebreak-perl_0.0.20190101-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Fetched 8745 kB in 1s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr97asqe4/texlive-latex-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libidn2-0 riscv64 2.3.8-2 [109 kB] Fetched 109 kB in 0s (1173 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_z0fex1e/libidn2-0_2.3.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 grep riscv64 3.11-4 [430 kB] Fetched 430 kB in 0s (5897 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9h65pq6n/grep_3.11-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (125 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpagfjguyo/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openssl riscv64 3.5.0-1 [1471 kB] Fetched 1471 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplzisvkx0/openssl_3.5.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnspr4 riscv64 2:4.36-1 [111 kB] Fetched 111 kB in 0s (1891 kB/s) dpkg-name: info: moved 'libnspr4_2%3a4.36-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpjywl7acz/libnspr4_4.36-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtiffxx6 riscv64 4.7.0-3 [164 kB] Fetched 164 kB in 0s (2281 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8okc4ro/libtiffxx6_4.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsystemd0 riscv64 257.5-2 [470 kB] Fetched 470 kB in 0s (4616 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp23sci11w/libsystemd0_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 python3.13 riscv64 3.13.3-2 [751 kB] Fetched 751 kB in 0s (6580 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps0pq2u_b/python3.13_3.13.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfreetype-dev riscv64 2.13.3+dfsg-1 [1145 kB] Fetched 1145 kB in 0s (9606 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7i1rdhvs/libfreetype-dev_2.13.3+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libudev1 riscv64 257.5-2 [153 kB] Fetched 153 kB in 0s (2273 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpznhou9xk/libudev1_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 coreutils riscv64 9.7-2 [3036 kB] Fetched 3036 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe87hr_71/coreutils_9.7-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcairo2 riscv64 1.18.4-1+b1 [544 kB] Fetched 544 kB in 0s (7144 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1xj7ciyr/libcairo2_1.18.4-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (217 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0dkbxij/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-pictures all 2024.20250309-1 [17.0 MB] Fetched 17.0 MB in 1s (19.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpls0ehalh/texlive-pictures_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz0b riscv64 10.2.0-1+b1 [533 kB] Fetched 533 kB in 0s (5299 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjcmhazmd/libharfbuzz0b_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxrandr2 riscv64 2:1.5.4-1+b3 [37.0 kB] Fetched 37.0 kB in 0s (658 kB/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpikxwlchj/libxrandr2_1.5.4-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libisl23 riscv64 0.27-1 [664 kB] Fetched 664 kB in 0s (5349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4mb4oewu/libisl23_0.27-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcre2-8-0 riscv64 10.45-1 [300 kB] Fetched 300 kB in 0s (2813 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwk0ie8bp/libpcre2-8-0_10.45-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgl1 riscv64 1.7.0-1+b2 [115 kB] Fetched 115 kB in 0s (1387 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpla5_35i0/libgl1_1.7.0-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libk5crypto3 riscv64 1.21.3-5 [100 kB] Fetched 100 kB in 0s (1087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpti6mo3tm/libk5crypto3_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-randr0 riscv64 1.17.0-2+b1 [117 kB] Fetched 117 kB in 0s (1350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg52akctm/libxcb-randr0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgtk-3-0t64 riscv64 3.24.49-3 [2774 kB] Fetched 2774 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwckdfaq6/libgtk-3-0t64_3.24.49-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 linux-libc-dev all 6.12.25-1 [2565 kB] Fetched 2565 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp48vdaemd/linux-libc-dev_6.12.25-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB] Fetched 106 kB in 0s (1467 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpgjr4vq7e/libcrypt1_4.4.38-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-shm0-dev riscv64 1.17.0-2+b1 [110 kB] Fetched 110 kB in 0s (2837 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcfqc8ky/libxcb-shm0-dev_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 sysvinit-utils riscv64 3.14-4 [33.7 kB] Fetched 33.7 kB in 0s (309 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphd4i94s2/sysvinit-utils_3.14-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libllvm19 riscv64 1:19.1.7-3 [24.9 MB] Fetched 24.9 MB in 2s (16.3 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpck4gw819/libllvm19_19.1.7-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libasound2t64 riscv64 1.2.14-1 [382 kB] Fetched 382 kB in 0s (3073 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd1s95_97/libasound2t64_1.2.14-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtirpc3t64 riscv64 1.3.6+ds-1 [86.0 kB] Fetched 86.0 kB in 0s (2485 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqe6pu2rm/libtirpc3t64_1.3.6+ds-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 base-passwd riscv64 3.6.7 [53.8 kB] Fetched 53.8 kB in 0s (1017 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wr9p_5u/base-passwd_3.6.7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb1 riscv64 1.17.0-2+b1 [145 kB] Fetched 145 kB in 0s (1578 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_dssnzq/libxcb1_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (2984 kB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpihdcmq8s/libx11-data_1.8.12-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 file riscv64 1:5.46-5 [43.4 kB] Fetched 43.4 kB in 0s (470 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp135ebj5q/file_5.46-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcre2-dev riscv64 10.45-1 [1918 kB] Fetched 1918 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcykzgw4k/libpcre2-dev_10.45-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libreadline-dev riscv64 8.2-6 [342 kB] Fetched 342 kB in 0s (3421 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp495_c6up/libreadline-dev_8.2-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libssl3t64 riscv64 3.5.0-1 [2217 kB] Fetched 2217 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmm7phnkn/libssl3t64_3.5.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgdbm-compat4t64 riscv64 1.24-2 [50.5 kB] Fetched 50.5 kB in 0s (1337 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp179ayc6n/libgdbm-compat4t64_1.24-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz-gobject0 riscv64 10.2.0-1+b1 [30.7 kB] Fetched 30.7 kB in 0s (617 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppmzw7r_3/libharfbuzz-gobject0_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 mawk riscv64 1.3.4.20250131-1 [142 kB] Fetched 142 kB in 0s (1236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf633rx0_/mawk_1.3.4.20250131-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtcl8.6 riscv64 8.6.16+dfsg-1 [1065 kB] Fetched 1065 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcw26q533/libtcl8.6_8.6.16+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 debianutils riscv64 5.22 [91.6 kB] Fetched 91.6 kB in 0s (1718 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpskxdb1fl/debianutils_5.22_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libasan8 riscv64 14.2.0-19 [2365 kB] Fetched 2365 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0tzes7xj/libasan8_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcups2t64 riscv64 2.4.10-2+b1 [251 kB] Fetched 251 kB in 0s (3713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ue_re1u/libcups2t64_2.4.10-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 g++-14-riscv64-linux-gnu riscv64 14.2.0-19 [15.0 MB] Fetched 15.0 MB in 1s (18.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvdei3gn_/g++-14-riscv64-linux-gnu_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 fontconfig-config riscv64 2.15.0-2.3 [318 kB] Fetched 318 kB in 0s (3512 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphrmbl30b/fontconfig-config_2.15.0-2.3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texinfo all 7.1.1-1 [1753 kB] Fetched 1753 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43zd6arn/texinfo_7.1.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjpeg62-turbo-dev riscv64 1:2.1.5-3.1 [420 kB] Fetched 420 kB in 0s (4513 kB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-3.1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1qxl52jb/libjpeg62-turbo-dev_2.1.5-3.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkrb5support0 riscv64 1.21.3-5 [34.0 kB] Fetched 34.0 kB in 0s (410 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcus5c5ay/libkrb5support0_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libacl1 riscv64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1m0if9s/libacl1_2.3.2-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libelf1t64 riscv64 0.192-4 [194 kB] Fetched 194 kB in 0s (2029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxg6xdgj6/libelf1t64_0.192-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openjdk-21-jdk riscv64 21.0.7+6-1 [10.4 kB] Fetched 10.4 kB in 0s (125 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp5diudek/openjdk-21-jdk_21.0.7+6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcurl4-openssl-dev riscv64 8.13.0-5 [1119 kB] Fetched 1119 kB in 0s (7895 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmysqmit/libcurl4-openssl-dev_8.13.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 media-types all 13.0.0 [29.3 kB] Fetched 29.3 kB in 0s (514 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhw01123/media-types_13.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfile-homedir-perl all 1.006-2 [42.4 kB] Fetched 42.4 kB in 0s (555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6gtug9qs/libfile-homedir-perl_1.006-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libblas-dev riscv64 3.12.1-2 [275 kB] Fetched 275 kB in 0s (3097 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgyjkwc8m/libblas-dev_3.12.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjpeg62-turbo riscv64 1:2.1.5-3.1 [155 kB] Fetched 155 kB in 0s (1878 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-3.1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp1r8evmag/libjpeg62-turbo_2.1.5-3.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libc6-dev riscv64 2.41-7 [3125 kB] Fetched 3125 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6g075vae/libc6-dev_2.41-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus-system-bus-common all 1.16.2-2 [53.5 kB] Fetched 53.5 kB in 0s (723 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv52zadpv/dbus-system-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-dri3-0 riscv64 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (1245 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4i2q8ho/libxcb-dri3-0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 g++ riscv64 4:14.2.0-1 [1328 B] Fetched 1328 B in 0s (17.8 kB/s) dpkg-name: info: moved 'g++_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpm3enezb1/g++_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglib2.0-dev-bin riscv64 2.84.1-2 [53.0 kB] Fetched 53.0 kB in 0s (704 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9z49tk8z/libglib2.0-dev-bin_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gfortran-14-riscv64-linux-gnu riscv64 14.2.0-19 [14.5 MB] Fetched 14.5 MB in 1s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_zdbxh_/gfortran-14-riscv64-linux-gnu_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgtk-3-common all 3.24.49-3 [4908 kB] Fetched 4908 kB in 0s (23.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdl4jlcp/libgtk-3-common_3.24.49-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libbrotli-dev riscv64 1.1.0-2+b7 [798 kB] Fetched 798 kB in 0s (8812 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt457pmvf/libbrotli-dev_1.1.0-2+b7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 at-spi2-common all 2.56.2-1 [171 kB] Fetched 171 kB in 0s (2986 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnczdg445/at-spi2-common_2.56.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 ncurses-bin riscv64 6.5+20250216-2 [436 kB] Fetched 436 kB in 0s (6681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdt8o8m0b/ncurses-bin_6.5+20250216-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 readline-common all 8.2-6 [69.4 kB] Fetched 69.4 kB in 0s (868 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjwq480i7/readline-common_8.2-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsm6 riscv64 2:1.2.6-1 [37.3 kB] Fetched 37.3 kB in 0s (717 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp407yd3b5/libsm6_1.2.6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 g++-14 riscv64 14.2.0-19 [22.5 kB] Fetched 22.5 kB in 0s (282 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp64dmg5pr/g++-14_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libice-dev riscv64 2:1.1.1-1 [130 kB] Fetched 130 kB in 0s (1485 kB/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpppm2afyw/libice-dev_1.1.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnghttp2-14 riscv64 1.64.0-1.1 [77.8 kB] Fetched 77.8 kB in 0s (902 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdl48z_bn/libnghttp2-14_1.64.0-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xkb-data all 2.42-1 [790 kB] Fetched 790 kB in 0s (6251 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaly4ai96/xkb-data_2.42-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjansson4 riscv64 2.14-2+b3 [40.7 kB] Fetched 40.7 kB in 0s (781 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp42ii0p15/libjansson4_2.14-2+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgmp-dev riscv64 2:6.3.0+dfsg-3 [1024 kB] Fetched 1024 kB in 0s (6556 kB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp72fl0vi9/libgmp-dev_6.3.0+dfsg-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gfortran riscv64 4:14.2.0-1 [1424 B] Fetched 1424 B in 0s (19.8 kB/s) dpkg-name: info: moved 'gfortran_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpo7fo8xci/gfortran_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libreadline8t64 riscv64 8.2-6 [169 kB] Fetched 169 kB in 0s (3928 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnt2ariok/libreadline8t64_8.2-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus-bin riscv64 1.16.2-2 [78.5 kB] Fetched 78.5 kB in 0s (1004 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmd49arua/dbus-bin_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-sync1 riscv64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (2012 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2z5hgmzu/libxcb-sync1_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 systemd-sysv riscv64 257.5-2 [63.9 kB] Fetched 63.9 kB in 0s (769 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqzov92u5/systemd-sysv_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsharpyuv-dev riscv64 1.5.0-0.1 [129 kB] Fetched 129 kB in 0s (1556 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpibsdm97a/libsharpyuv-dev_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libapparmor1 riscv64 4.1.0-1 [44.6 kB] Fetched 44.6 kB in 0s (596 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps2p1j5ar/libapparmor1_4.1.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libaudit-common all 1:4.0.2-2 [12.7 kB] Fetched 12.7 kB in 0s (239 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.0.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp8x516wkv/libaudit-common_4.0.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmpfr6 riscv64 4.2.2-1 [664 kB] Fetched 664 kB in 0s (8343 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9xmnkct2/libmpfr6_4.2.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libthai-data all 0.1.29-2 [168 kB] Fetched 168 kB in 0s (2390 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcinrjsra/libthai-data_0.1.29-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxxf86vm1 riscv64 1:1.1.4-1+b4 [19.8 kB] Fetched 19.8 kB in 0s (218 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-1+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpvf89w_hp/libxxf86vm1_1.1.4-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdrm2 riscv64 2.4.124-2 [40.1 kB] Fetched 40.1 kB in 0s (747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps1kw_iod/libdrm2_2.4.124-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 systemd riscv64 257.5-2 [3057 kB] Fetched 3057 kB in 0s (13.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdplnwiiw/systemd_257.5-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwebp-dev riscv64 1.5.0-0.1 [762 kB] Fetched 762 kB in 0s (6184 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfpn4flbh/libwebp-dev_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblcms2-2 riscv64 2.16-2 [169 kB] Fetched 169 kB in 0s (5817 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpycnnlbd_/liblcms2-2_2.16-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwebp7 riscv64 1.5.0-0.1 [286 kB] Fetched 286 kB in 0s (3816 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp93zpp_3_/libwebp7_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (5868 kB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmp1m8ktcke/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjpeg-dev riscv64 1:2.1.5-3.1 [72.0 kB] Fetched 72.0 kB in 0s (1130 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-3.1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpff8gb968/libjpeg-dev_2.1.5-3.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xserver-common all 2:21.1.16-1 [2409 kB] Fetched 2409 kB in 0s (12.9 MB/s) dpkg-name: info: moved 'xserver-common_2%3a21.1.16-1_all.deb' to '/srv/rebuilderd/tmp/tmphpu18zpl/xserver-common_21.1.16-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpam0g riscv64 1.7.0-3 [70.0 kB] Fetched 70.0 kB in 0s (806 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcoi15c80/libpam0g_1.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (827 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmk_vzol8/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openjdk-21-jdk-headless riscv64 21.0.7+6-1 [82.0 MB] Fetched 82.0 MB in 5s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt12b700y/openjdk-21-jdk-headless_21.0.7+6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libteckit0 riscv64 2.5.12+ds1-1+b1 [275 kB] Fetched 275 kB in 0s (2893 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuhe91k0c/libteckit0_2.5.12+ds1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpango1.0-dev riscv64 1.56.3-1 [155 kB] Fetched 155 kB in 0s (1802 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsp7oq3ld/libpango1.0-dev_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Fetched 68.6 kB in 0s (874 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7py0dksr/libcommons-logging-java_1.3.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gfortran-14 riscv64 14.2.0-19 [14.5 kB] Fetched 14.5 kB in 0s (273 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3nhdy6hx/gfortran-14_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz-cairo0 riscv64 10.2.0-1+b1 [48.3 kB] Fetched 48.3 kB in 0s (769 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuoj9t08e/libharfbuzz-cairo0_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmpfi0 riscv64 1.5.4+ds-4 [37.0 kB] Fetched 37.0 kB in 0s (473 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_2x98oq/libmpfi0_1.5.4+ds-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 binutils riscv64 2.44-3 [267 kB] Fetched 267 kB in 0s (2720 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumx1jlf9/binutils_2.44-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblerc-dev riscv64 4.0.0+ds-5 [724 kB] Fetched 724 kB in 0s (6029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaoyr_sr_/liblerc-dev_4.0.0+ds-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmount-dev riscv64 2.41-4 [30.5 kB] Fetched 30.5 kB in 0s (307 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4x5cremo/libmount-dev_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcommons-parent-java all 56-1 [10.8 kB] Fetched 10.8 kB in 0s (131 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphfzjox31/libcommons-parent-java_56-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxft-dev riscv64 2.3.6-1+b4 [124 kB] Fetched 124 kB in 0s (1568 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuvx0idnt/libxft-dev_2.3.6-1+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libz3-4 riscv64 4.13.3-1 [8514 kB] Fetched 8514 kB in 0s (17.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6wn614yr/libz3-4_4.13.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblzma5 riscv64 5.8.1-1 [313 kB] Fetched 313 kB in 0s (4922 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7j9pu9uy/liblzma5_5.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgomp1 riscv64 14.2.0-19 [130 kB] Fetched 130 kB in 0s (2188 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcdzhe67n/libgomp1_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Fetched 19.7 kB in 0s (393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7cr0k2c9/libfile-stripnondeterminism-perl_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxss1 riscv64 1:1.2.3-1+b3 [16.9 kB] Fetched 16.9 kB in 0s (212 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpn8a9u0yw/libxss1_1.2.3-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcursor1 riscv64 1:1.2.3-1 [40.2 kB] Fetched 40.2 kB in 0s (462 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmph4i95f_a/libxcursor1_1.2.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libavahi-common3 riscv64 0.8-16 [44.4 kB] Fetched 44.4 kB in 0s (580 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq7yamznc/libavahi-common3_0.8-16_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libatspi2.0-0t64 riscv64 2.56.2-1 [79.8 kB] Fetched 79.8 kB in 0s (895 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppeq4phi_/libatspi2.0-0t64_2.56.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxmuu1 riscv64 2:1.1.3-3+b4 [21.7 kB] Fetched 21.7 kB in 0s (683 kB/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-3+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpxa_0efyv/libxmuu1_1.1.3-3+b4_riscv64.deb' Downloading dependency 249 of 519: nettle-dev:riscv64=3.10.1-1 Downloading dependency 250 of 519: libkadm5clnt-mit12:riscv64=1.21.3-5 Downloading dependency 251 of 519: dbus-user-session:riscv64=1.16.2-2 Downloading dependency 252 of 519: libthai-dev:riscv64=0.1.29-2+b1 Downloading dependency 253 of 519: gir1.2-glib-2.0-dev:riscv64=2.84.1-2 Downloading dependency 254 of 519: libunicode-linebreak-perl:riscv64=0.0.20190101-1+b4 Downloading dependency 255 of 519: texlive-latex-recommended:riscv64=2024.20250309-1 Downloading dependency 256 of 519: libidn2-0:riscv64=2.3.8-2 Downloading dependency 257 of 519: grep:riscv64=3.11-4 Downloading dependency 258 of 519: netbase:riscv64=6.5 Downloading dependency 259 of 519: openssl:riscv64=3.5.0-1 Downloading dependency 260 of 519: libnspr4:riscv64=2:4.36-1 Downloading dependency 261 of 519: libtiffxx6:riscv64=4.7.0-3 Downloading dependency 262 of 519: libsystemd0:riscv64=257.5-2 Downloading dependency 263 of 519: python3.13:riscv64=3.13.3-2 Downloading dependency 264 of 519: libfreetype-dev:riscv64=2.13.3+dfsg-1 Downloading dependency 265 of 519: libudev1:riscv64=257.5-2 Downloading dependency 266 of 519: coreutils:riscv64=9.7-2 Downloading dependency 267 of 519: libcairo2:riscv64=1.18.4-1+b1 Downloading dependency 268 of 519: libxml-sax-base-perl:riscv64=1.09-3 Downloading dependency 269 of 519: texlive-pictures:riscv64=2024.20250309-1 Downloading dependency 270 of 519: libharfbuzz0b:riscv64=10.2.0-1+b1 Downloading dependency 271 of 519: libxrandr2:riscv64=2:1.5.4-1+b3 Downloading dependency 272 of 519: libisl23:riscv64=0.27-1 Downloading dependency 273 of 519: libpcre2-8-0:riscv64=10.45-1 Downloading dependency 274 of 519: libgl1:riscv64=1.7.0-1+b2 Downloading dependency 275 of 519: libk5crypto3:riscv64=1.21.3-5 Downloading dependency 276 of 519: libxcb-randr0:riscv64=1.17.0-2+b1 Downloading dependency 277 of 519: libgtk-3-0t64:riscv64=3.24.49-3 Downloading dependency 278 of 519: linux-libc-dev:riscv64=6.12.25-1 Downloading dependency 279 of 519: libcrypt1:riscv64=1:4.4.38-1 Downloading dependency 280 of 519: libxcb-shm0-dev:riscv64=1.17.0-2+b1 Downloading dependency 281 of 519: sysvinit-utils:riscv64=3.14-4 Downloading dependency 282 of 519: libllvm19:riscv64=1:19.1.7-3 Downloading dependency 283 of 519: libasound2t64:riscv64=1.2.14-1 Downloading dependency 284 of 519: libtirpc3t64:riscv64=1.3.6+ds-1 Downloading dependency 285 of 519: base-passwd:riscv64=3.6.7 Downloading dependency 286 of 519: libxcb1:riscv64=1.17.0-2+b1 Downloading dependency 287 of 519: libx11-data:riscv64=2:1.8.12-1 Downloading dependency 288 of 519: file:riscv64=1:5.46-5 Downloading dependency 289 of 519: libpcre2-dev:riscv64=10.45-1 Downloading dependency 290 of 519: libreadline-dev:riscv64=8.2-6 Downloading dependency 291 of 519: libssl3t64:riscv64=3.5.0-1 Downloading dependency 292 of 519: libgdbm-compat4t64:riscv64=1.24-2 Downloading dependency 293 of 519: libharfbuzz-gobject0:riscv64=10.2.0-1+b1 Downloading dependency 294 of 519: mawk:riscv64=1.3.4.20250131-1 Downloading dependency 295 of 519: libtcl8.6:riscv64=8.6.16+dfsg-1 Downloading dependency 296 of 519: debianutils:riscv64=5.22 Downloading dependency 297 of 519: libasan8:riscv64=14.2.0-19 Downloading dependency 298 of 519: libcups2t64:riscv64=2.4.10-2+b1 Downloading dependency 299 of 519: g++-14-riscv64-linux-gnu:riscv64=14.2.0-19 Downloading dependency 300 of 519: fontconfig-config:riscv64=2.15.0-2.3 Downloading dependency 301 of 519: texinfo:riscv64=7.1.1-1 Downloading dependency 302 of 519: libjpeg62-turbo-dev:riscv64=1:2.1.5-3.1 Downloading dependency 303 of 519: libkrb5support0:riscv64=1.21.3-5 Downloading dependency 304 of 519: libacl1:riscv64=2.3.2-2+b1 Downloading dependency 305 of 519: libelf1t64:riscv64=0.192-4 Downloading dependency 306 of 519: openjdk-21-jdk:riscv64=21.0.7+6-1 Downloading dependency 307 of 519: libcurl4-openssl-dev:riscv64=8.13.0-5 Downloading dependency 308 of 519: media-types:riscv64=13.0.0 Downloading dependency 309 of 519: libfile-homedir-perl:riscv64=1.006-2 Downloading dependency 310 of 519: libblas-dev:riscv64=3.12.1-2 Downloading dependency 311 of 519: libjpeg62-turbo:riscv64=1:2.1.5-3.1 Downloading dependency 312 of 519: libc6-dev:riscv64=2.41-7 Downloading dependency 313 of 519: dbus-system-bus-common:riscv64=1.16.2-2 Downloading dependency 314 of 519: libxcb-dri3-0:riscv64=1.17.0-2+b1 Downloading dependency 315 of 519: g++:riscv64=4:14.2.0-1 Downloading dependency 316 of 519: libglib2.0-dev-bin:riscv64=2.84.1-2 Downloading dependency 317 of 519: gfortran-14-riscv64-linux-gnu:riscv64=14.2.0-19 Downloading dependency 318 of 519: libgtk-3-common:riscv64=3.24.49-3 Downloading dependency 319 of 519: libbrotli-dev:riscv64=1.1.0-2+b7 Downloading dependency 320 of 519: at-spi2-common:riscv64=2.56.2-1 Downloading dependency 321 of 519: ncurses-bin:riscv64=6.5+20250216-2 Downloading dependency 322 of 519: readline-common:riscv64=8.2-6 Downloading dependency 323 of 519: libsm6:riscv64=2:1.2.6-1 Downloading dependency 324 of 519: g++-14:riscv64=14.2.0-19 Downloading dependency 325 of 519: libice-dev:riscv64=2:1.1.1-1 Downloading dependency 326 of 519: libnghttp2-14:riscv64=1.64.0-1.1 Downloading dependency 327 of 519: xkb-data:riscv64=2.42-1 Downloading dependency 328 of 519: libjansson4:riscv64=2.14-2+b3 Downloading dependency 329 of 519: libgmp-dev:riscv64=2:6.3.0+dfsg-3 Downloading dependency 330 of 519: gfortran:riscv64=4:14.2.0-1 Downloading dependency 331 of 519: libreadline8t64:riscv64=8.2-6 Downloading dependency 332 of 519: dbus-bin:riscv64=1.16.2-2 Downloading dependency 333 of 519: libxcb-sync1:riscv64=1.17.0-2+b1 Downloading dependency 334 of 519: systemd-sysv:riscv64=257.5-2 Downloading dependency 335 of 519: libsharpyuv-dev:riscv64=1.5.0-0.1 Downloading dependency 336 of 519: libapparmor1:riscv64=4.1.0-1 Downloading dependency 337 of 519: libaudit-common:riscv64=1:4.0.2-2 Downloading dependency 338 of 519: libmpfr6:riscv64=4.2.2-1 Downloading dependency 339 of 519: libthai-data:riscv64=0.1.29-2 Downloading dependency 340 of 519: libxxf86vm1:riscv64=1:1.1.4-1+b4 Downloading dependency 341 of 519: libdrm2:riscv64=2.4.124-2 Downloading dependency 342 of 519: systemd:riscv64=257.5-2 Downloading dependency 343 of 519: libwebp-dev:riscv64=1.5.0-0.1 Downloading dependency 344 of 519: liblcms2-2:riscv64=2.16-2 Downloading dependency 345 of 519: libwebp7:riscv64=1.5.0-0.1 Downloading dependency 346 of 519: xfonts-encodings:riscv64=1:1.0.4-2.2 Downloading dependency 347 of 519: libjpeg-dev:riscv64=1:2.1.5-3.1 Downloading dependency 348 of 519: xserver-common:riscv64=2:21.1.16-1 Downloading dependency 349 of 519: libpam0g:riscv64=1.7.0-3 Downloading dependency 350 of 519: libxml-sax-perl:riscv64=1.02+dfsg-4 Downloading dependency 351 of 519: openjdk-21-jdk-headless:riscv64=21.0.7+6-1 Downloading dependency 352 of 519: libteckit0:riscv64=2.5.12+ds1-1+b1 Downloading dependency 353 of 519: libpango1.0-dev:riscv64=1.56.3-1 Downloading dependency 354 of 519: libcommons-logging-java:riscv64=1.3.0-1 Downloading dependency 355 of 519: gfortran-14:riscv64=14.2.0-19 Downloading dependency 356 of 519: libharfbuzz-cairo0:riscv64=10.2.0-1+b1 Downloading dependency 357 of 519: libmpfi0:riscv64=1.5.4+ds-4 Downloading dependency 358 of 519: binutils:riscv64=2.44-3 Downloading dependency 359 of 519: liblerc-dev:riscv64=4.0.0+ds-5 Downloading dependency 360 of 519: libmount-dev:riscv64=2.41-4 Downloading dependency 361 of 519: libcommons-parent-java:riscv64=56-1 Downloading dependency 362 of 519: libxft-dev:riscv64=2.3.6-1+b4 Downloading dependency 363 of 519: libz3-4:riscv64=4.13.3-1 Downloading dependency 364 of 519: liblzma5:riscv64=5.8.1-1 Downloading dependency 365 of 519: libgomp1:riscv64=14.2.0-19 Downloading dependency 366 of 519: libfile-stripnondeterminism-perl:riscv64=1.14.1-2 Downloading dependency 367 of 519: libxss1:riscv64=1:1.2.3-1+b3 Downloading dependency 368 of 519: libxcursor1:riscv64=1:1.2.3-1 Downloading dependency 369 of 519: libavahi-common3:riscv64=0.8-16 Downloading dependency 370 of 519: libatspi2.0-0t64:riscv64=2.56.2-1 Downloading dependency 371 of 519: libxmuu1:riscv64=2:1.1.3-3+b4 Downloading dependency 372 of 519: libxrender1:riscv64=1:0.9.12-1Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxrender1 riscv64 1:0.9.12-1 [28.5 kB] Fetched 28.5 kB in 0s (386 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpx9pyobbt/libxrender1_0.9.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tcl8.6 riscv64 8.6.16+dfsg-1 [121 kB] Fetched 121 kB in 0s (1468 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbiu5yy88/tcl8.6_8.6.16+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Fetched 4989 kB in 0s (14.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9sltcd4z/texlive-fonts-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-glib-2.0 riscv64 2.84.1-2 [197 kB] Fetched 197 kB in 0s (1875 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9xp1vdji/gir1.2-glib-2.0_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgif7 riscv64 5.2.2-1+b1 [44.9 kB] Fetched 44.9 kB in 0s (568 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpagljuybn/libgif7_5.2.2-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblzo2-2 riscv64 2.10-3+b1 [60.9 kB] Fetched 60.9 kB in 0s (696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3898v7gg/liblzo2-2_2.10-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmd0 riscv64 1.1.0-2+b1 [37.6 kB] Fetched 37.6 kB in 0s (770 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9e71h72y/libmd0_1.1.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwayland-egl1 riscv64 1.23.1-3 [5760 B] Fetched 5760 B in 0s (133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvazsmk6x/libwayland-egl1_1.23.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpsl-dev riscv64 0.21.2-1.1+b1 [87.2 kB] Fetched 87.2 kB in 0s (687 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpha33c4_n/libpsl-dev_0.21.2-1.1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Fetched 326 kB in 0s (2944 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv82a5pg8/libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libunbound8 riscv64 1.22.0-1+b1 [605 kB] Fetched 605 kB in 0s (5187 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph0bsvkdg/libunbound8_1.22.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgdbm6t64 riscv64 1.24-2 [75.9 kB] Fetched 75.9 kB in 0s (1548 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk6ryiwcl/libgdbm6t64_1.24-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (4459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvi3by_6i/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-binaries riscv64 2024.20240313.70630+ds-6 [8208 kB] Fetched 8208 kB in 1s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp67r9c31t/texlive-binaries_2024.20240313.70630+ds-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libncurses-dev riscv64 6.5+20250216-2 [838 kB] Fetched 838 kB in 0s (6606 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5lxpyziw/libncurses-dev_6.5+20250216-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtasn1-6 riscv64 4.20.0-2 [50.6 kB] Fetched 50.6 kB in 0s (602 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8o79a5ib/libtasn1-6_4.20.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgl1-mesa-dri riscv64 25.0.4-1 [44.3 kB] Fetched 44.3 kB in 0s (617 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpze3mo1se/libgl1-mesa-dri_25.0.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-9 [716 kB] Fetched 716 kB in 0s (6234 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4zq2fhrx/libdb5.3t64_5.3.28+dfsg2-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libssh2-1-dev riscv64 1.11.1-1 [560 kB] Fetched 560 kB in 0s (4936 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuryxitf5/libssh2-1-dev_1.11.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpcre2-16-0 riscv64 10.45-1 [277 kB] Fetched 277 kB in 0s (3070 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5a6z7r1a/libpcre2-16-0_10.45-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dbus riscv64 1.16.2-2 [71.5 kB] Fetched 71.5 kB in 0s (906 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnlt2prx7/dbus_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (1327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt9gqm5zb/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libseccomp2 riscv64 2.6.0-2 [53.1 kB] Fetched 53.1 kB in 0s (465 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr49udonb/libseccomp2_2.6.0-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcap2 riscv64 1:2.75-7 [28.6 kB] Fetched 28.6 kB in 0s (593 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-7_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmgq1b0ds/libcap2_2.75-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnghttp3-9 riscv64 1.8.0-1 [68.5 kB] Fetched 68.5 kB in 0s (827 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7qw28jq5/libnghttp3-9_1.8.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxext-dev riscv64 2:1.3.4-1+b3 [147 kB] Fetched 147 kB in 0s (5097 kB/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpkghukbdf/libxext-dev_1.3.4-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dwz riscv64 0.15-1+b3 [114 kB] Fetched 114 kB in 0s (1427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyb0igr6h/dwz_0.15-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglib2.0-0t64 riscv64 2.84.1-2 [1525 kB] Fetched 1525 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokoh1ss3/libglib2.0-0t64_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-pango-1.0 riscv64 1.56.3-1 [39.1 kB] Fetched 39.1 kB in 0s (498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgpc6gnsq/gir1.2-pango-1.0_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpython3.13-stdlib riscv64 3.13.3-2 [1918 kB] Fetched 1918 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpojkbycj4/libpython3.13-stdlib_3.13.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 ca-certificates-java all 20240118 [11.6 kB] Fetched 11.6 kB in 0s (143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_skh5otl/ca-certificates-java_20240118_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgraphite2-3 riscv64 1.3.14-2+b1 [78.1 kB] Fetched 78.1 kB in 0s (861 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkevt693k/libgraphite2-3_1.3.14-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-shm0 riscv64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (1120 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplytk16pv/libxcb-shm0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xtrans-dev all 1.4.0-1 [98.7 kB] Fetched 98.7 kB in 0s (998 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpev4dnt_9/xtrans-dev_1.4.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpaper2 riscv64 2.2.5-0.3+b2 [16.6 kB] Fetched 16.6 kB in 0s (194 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xo2fjq7/libpaper2_2.2.5-0.3+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcap-ng0 riscv64 0.8.5-4+b1 [17.2 kB] Fetched 17.2 kB in 0s (212 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnulpwedd/libcap-ng0_0.8.5-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdrm-amdgpu1 riscv64 2.4.124-2 [22.2 kB] Fetched 22.2 kB in 0s (369 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw8jdryt8/libdrm-amdgpu1_2.4.124-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 29.0 MB in 2s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcxf7jvb3/texlive-plain-generic_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsynctex2 riscv64 2024.20240313.70630+ds-6 [62.9 kB] Fetched 62.9 kB in 0s (790 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu6_55gws/libsynctex2_2024.20240313.70630+ds-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 t1utils riscv64 1.41-4+b1 [60.0 kB] Fetched 60.0 kB in 0s (1206 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08e88cml/t1utils_1.41-4+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpam-modules riscv64 1.7.0-3 [175 kB] Fetched 175 kB in 0s (2236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplqdvavn4/libpam-modules_1.7.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtirpc-dev riscv64 1.3.6+ds-1 [308 kB] Fetched 308 kB in 0s (3448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51omrz1v/libtirpc-dev_1.3.6+ds-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-9 [20.5 kB] Fetched 20.5 kB in 0s (256 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3gvipd1h/libsasl2-modules-db_2.1.28+dfsg1-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 hostname riscv64 3.25 [10.7 kB] Fetched 10.7 kB in 0s (203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp361b3ol9/hostname_3.25_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3w8p_mn_/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 mount riscv64 2.41-4 [168 kB] Fetched 168 kB in 0s (1688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppfvx653u/mount_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gir1.2-freedesktop-dev riscv64 1.84.0-1 [51.6 kB] Fetched 51.6 kB in 0s (1423 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc7sfyltg/gir1.2-freedesktop-dev_1.84.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 bsdextrautils riscv64 2.41-4 [98.0 kB] Fetched 98.0 kB in 0s (3831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp785achkq/bsdextrautils_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libedit2 riscv64 3.1-20250104-1 [92.5 kB] Fetched 92.5 kB in 0s (1623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvk64q8ij/libedit2_3.1-20250104-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libatk1.0-0t64 riscv64 2.56.2-1 [51.9 kB] Fetched 51.9 kB in 0s (1054 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpufvl10fd/libatk1.0-0t64_2.56.2-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Fetched 85.7 kB in 0s (1152 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpg45grs7g/zlib1g_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgfortran5 riscv64 14.2.0-19 [398 kB] Fetched 398 kB in 0s (3951 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj_55kalg/libgfortran5_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgcc-s1 riscv64 14.2.0-19 [56.8 kB] Fetched 56.8 kB in 0s (722 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpruaif_n0/libgcc-s1_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libitm1 riscv64 14.2.0-19 [25.8 kB] Fetched 25.8 kB in 0s (496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg_johp8x/libitm1_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxfixes3 riscv64 1:6.0.0-2+b4 [20.3 kB] Fetched 20.3 kB in 0s (258 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpuz79sct1/libxfixes3_6.0.0-2+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpipeline1 riscv64 1.5.8-1 [40.3 kB] Fetched 40.3 kB in 0s (464 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpem7g7hu0/libpipeline1_1.5.8-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxfont2 riscv64 1:2.0.6-1+b3 [132 kB] Fetched 132 kB in 0s (1446 kB/s) dpkg-name: info: moved 'libxfont2_1%3a2.0.6-1+b3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmnubozwu/libxfont2_2.0.6-1+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtext-charwidth-perl riscv64 0.04-11+b4 [9396 B] Fetched 9396 B in 0s (183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppxrtz_9x/libtext-charwidth-perl_0.04-11+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 findutils riscv64 4.10.0-3 [706 kB] Fetched 706 kB in 0s (8933 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt04fdqjq/findutils_4.10.0-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libunistring5 riscv64 1.3-2 [474 kB] Fetched 474 kB in 0s (6936 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahb1m8nd/libunistring5_1.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libjbig0 riscv64 2.1-6.1+b2 [33.0 kB] Fetched 33.0 kB in 0s (417 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ti5kyll/libjbig0_2.1-6.1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 automake all 1:1.17-4 [862 kB] Fetched 862 kB in 0s (5796 kB/s) dpkg-name: info: moved 'automake_1%3a1.17-4_all.deb' to '/srv/rebuilderd/tmp/tmp63mz4zzc/automake_1.17-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libwebpdecoder3 riscv64 1.5.0-0.1 [186 kB] Fetched 186 kB in 0s (2235 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj22wiibn/libwebpdecoder3_1.5.0-0.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxdmcp-dev riscv64 1:1.1.5-1 [52.9 kB] Fetched 52.9 kB in 0s (1023 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_5t_5sqt/libxdmcp-dev_1.1.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxcb-xfixes0 riscv64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (1379 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_3tdx2b/libxcb-xfixes0_1.17.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 patch riscv64 2.8-1 [134 kB] Fetched 134 kB in 0s (2448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpllavjife/patch_2.8-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libffi-dev riscv64 3.4.8-2 [81.1 kB] Fetched 81.1 kB in 0s (985 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_awr2r6d/libffi-dev_3.4.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-latex-base all 2024.20250309-1 [1294 kB] Fetched 1294 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9h3qqn_9/texlive-latex-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 groff-base riscv64 1.23.0-7 [1164 kB] Fetched 1164 kB in 0s (9862 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprlwtf0hs/groff-base_1.23.0-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libhogweed6t64 riscv64 3.10.1-1 [336 kB] Fetched 336 kB in 0s (3631 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpajvdsugm/libhogweed6t64_3.10.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdpkg-perl all 1.22.18 [649 kB] Fetched 649 kB in 0s (4296 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0q1k_dnw/libdpkg-perl_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libssl-dev riscv64 3.5.0-1 [5797 kB] Fetched 5797 kB in 1s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz7escpg3/libssl-dev_3.5.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpython3.13-minimal riscv64 3.13.3-2 [857 kB] Fetched 857 kB in 0s (7694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97moz5m_/libpython3.13-minimal_3.13.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpango-1.0-0 riscv64 1.56.3-1 [232 kB] Fetched 232 kB in 0s (1996 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6di9lito/libpango-1.0-0_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtool all 2.5.4-4 [539 kB] Fetched 539 kB in 0s (7160 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyc3pe5l3/libtool_2.5.4-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 cpp-14-riscv64-linux-gnu riscv64 14.2.0-19 [14.0 MB] Fetched 14.0 MB in 1s (27.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2h9bov7v/cpp-14-riscv64-linux-gnu_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Fetched 8620 B in 0s (116 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkzm5aaa/dh-strip-nondeterminism_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdeflate-dev riscv64 1.23-2 [80.1 kB] Fetched 80.1 kB in 0s (1463 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6086_i4d/libdeflate-dev_1.23-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdebhelper-perl all 13.24.2 [90.9 kB] Fetched 90.9 kB in 0s (1713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdimrdb_x/libdebhelper-perl_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkrb5-dev riscv64 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (201 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpslpkx4rb/libkrb5-dev_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblapack-dev riscv64 3.12.1-2 [11.5 MB] Fetched 11.5 MB in 1s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53aloui4/liblapack-dev_3.12.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglvnd0 riscv64 1.7.0-1+b2 [62.6 kB] Fetched 62.6 kB in 0s (794 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4kbjp6m/libglvnd0_1.7.0-1+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 perl riscv64 5.40.1-3 [267 kB] Fetched 267 kB in 0s (2914 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp36riyg75/perl_5.40.1-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 python3 riscv64 3.13.3-1 [28.2 kB] Fetched 28.2 kB in 0s (283 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9wlsclr_/python3_3.13.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 g++-riscv64-linux-gnu riscv64 4:14.2.0-1 [1196 B] Fetched 1196 B in 0s (13.7 kB/s) dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpv0ujesjz/g++-riscv64-linux-gnu_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdatrie1 riscv64 0.2.13-3+b1 [38.6 kB] Fetched 38.6 kB in 0s (401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_feuoy_4/libdatrie1_0.2.13-3+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprsckzqb8/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxml2 riscv64 2.12.7+dfsg+really2.9.14-0.4 [708 kB] Fetched 708 kB in 0s (8073 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbmf2g7wh/libxml2_2.12.7+dfsg+really2.9.14-0.4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 texlive-fonts-extra all 2024.20250309-2 [624 MB] Fetched 624 MB in 32s (19.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgnuhv6yw/texlive-fonts-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libnghttp2-dev riscv64 1.64.0-1.1 [219 kB] Fetched 219 kB in 0s (3496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbl_yp53i/libnghttp2-dev_1.64.0-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfribidi0 riscv64 1.0.16-1 [27.4 kB] Fetched 27.4 kB in 0s (460 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxndpft8o/libfribidi0_1.0.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libavahi-client3 riscv64 0.8-16 [47.7 kB] Fetched 47.7 kB in 0s (702 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoxzht0qs/libavahi-client3_0.8-16_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-3 [558 kB] Fetched 558 kB in 0s (7137 kB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpawuufjvz/libgmp10_6.3.0+dfsg-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (277 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmp69xoc0lz/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gtk-update-icon-cache riscv64 4.18.4+ds-2 [51.7 kB] Fetched 51.7 kB in 0s (804 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuj1n19to/gtk-update-icon-cache_4.18.4+ds-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 pango1.0-tools riscv64 1.56.3-1 [42.5 kB] Fetched 42.5 kB in 0s (585 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplkqhi1xt/pango1.0-tools_1.56.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxshmfence1 riscv64 1.3.3-1 [10.9 kB] Fetched 10.9 kB in 0s (140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe4dh3xkg/libxshmfence1_1.3.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcairo-script-interpreter2 riscv64 1.18.4-1+b1 [61.6 kB] Fetched 61.6 kB in 0s (1545 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbii7jk1a/libcairo-script-interpreter2_1.18.4-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpng-dev riscv64 1.6.47-1.1 [512 kB] Fetched 512 kB in 0s (4945 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps7ot_9hu/libpng-dev_1.6.47-1.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libthai0 riscv64 0.1.29-2+b1 [49.2 kB] Fetched 49.2 kB in 0s (632 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3tk9clld/libthai0_0.1.29-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libharfbuzz-icu0 riscv64 10.2.0-1+b1 [15.5 kB] Fetched 15.5 kB in 0s (185 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmcuvvuu4/libharfbuzz-icu0_10.2.0-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxrender-dev riscv64 1:0.9.12-1 [62.7 kB] Fetched 62.7 kB in 0s (662 kB/s) dpkg-name: info: moved 'libxrender-dev_1%3a0.9.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpircv84oh/libxrender-dev_0.9.12-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 mpack riscv64 1.6-18+b2 [38.1 kB] Fetched 38.1 kB in 0s (693 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpadtsqs18/mpack_1.6-18+b2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 x11-common all 1:7.7+24 [217 kB] Fetched 217 kB in 0s (3505 kB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+24_all.deb' to '/srv/rebuilderd/tmp/tmph0nczo1d/x11-common_7.7+24_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (1481 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphihk4oaf/xdg-utils_1.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libatomic1 riscv64 14.2.0-19 [8672 B] Fetched 8672 B in 0s (168 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnh1kjae/libatomic1_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpkgconf3 riscv64 1.8.1-4 [36.0 kB] Fetched 36.0 kB in 0s (341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpui6w_fz1/libpkgconf3_1.8.1-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openjdk-21-jre-headless riscv64 21.0.7+6-1 [41.3 MB] Fetched 41.3 MB in 2s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkrwlffaz/openjdk-21-jre-headless_21.0.7+6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdrm-common all 2.4.124-2 [8288 B] Fetched 8288 B in 0s (156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp37x58ric/libdrm-common_2.4.124-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxau6 riscv64 1:1.0.11-1 [20.5 kB] Fetched 20.5 kB in 0s (246 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpu5toyctt/libxau6_1.0.11-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 util-linux riscv64 2.41-4 [1231 kB] Fetched 1231 kB in 0s (7878 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps1ob9jgp/util-linux_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpsl5t64 riscv64 0.21.2-1.1+b1 [57.3 kB] Fetched 57.3 kB in 0s (721 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdzxef726/libpsl5t64_0.21.2-1.1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcurl4t64 riscv64 8.13.0-5 [386 kB] Fetched 386 kB in 0s (3953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpdn0p04/libcurl4t64_8.13.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 java-common all 0.76 [6776 B] Fetched 6776 B in 0s (86.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxuio7bd1/java-common_0.76_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (1350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpkp9915/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-9 [60.9 kB] Fetched 60.9 kB in 0s (1171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy31uo42s/libsasl2-2_2.1.28+dfsg1-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libavahi-common-data riscv64 0.8-16 [112 kB] Fetched 112 kB in 0s (1363 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmwf6g8e4/libavahi-common-data_0.8-16_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgssrpc4t64 riscv64 1.21.3-5 [60.7 kB] Fetched 60.7 kB in 0s (1100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyd119ves/libgssrpc4t64_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libexpat1-dev riscv64 2.7.1-1 [293 kB] Fetched 293 kB in 0s (2616 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprph8t7u8/libexpat1-dev_2.7.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 perl-modules-5.40 all 5.40.1-3 [3021 kB] Fetched 3021 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpce_d01_t/perl-modules-5.40_5.40.1-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libyaml-tiny-perl all 1.76-1 [29.8 kB] Fetched 29.8 kB in 0s (338 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2u8jpway/libyaml-tiny-perl_1.76-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libpangoft2-1.0-0 riscv64 1.56.3-1 [55.9 kB] Fetched 55.9 kB in 0s (674 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdnunxzx/libpangoft2-1.0-0_1.56.3-1_riscv64.deb' Downloading dependency 373 of 519: tcl8.6:riscv64=8.6.16+dfsg-1 Downloading dependency 374 of 519: texlive-fonts-recommended:riscv64=2024.20250309-1 Downloading dependency 375 of 519: gir1.2-glib-2.0:riscv64=2.84.1-2 Downloading dependency 376 of 519: libgif7:riscv64=5.2.2-1+b1 Downloading dependency 377 of 519: liblzo2-2:riscv64=2.10-3+b1 Downloading dependency 378 of 519: libmd0:riscv64=1.1.0-2+b1 Downloading dependency 379 of 519: libwayland-egl1:riscv64=1.23.1-3 Downloading dependency 380 of 519: libpsl-dev:riscv64=0.21.2-1.1+b1 Downloading dependency 381 of 519: libjs-jquery:riscv64=3.6.1+dfsg+~3.5.14-1 Downloading dependency 382 of 519: libunbound8:riscv64=1.22.0-1+b1 Downloading dependency 383 of 519: libgdbm6t64:riscv64=1.24-2 Downloading dependency 384 of 519: autoconf:riscv64=2.72-3.1 Downloading dependency 385 of 519: texlive-binaries:riscv64=2024.20240313.70630+ds-6 Downloading dependency 386 of 519: libncurses-dev:riscv64=6.5+20250216-2 Downloading dependency 387 of 519: libtasn1-6:riscv64=4.20.0-2 Downloading dependency 388 of 519: libgl1-mesa-dri:riscv64=25.0.4-1 Downloading dependency 389 of 519: libdb5.3t64:riscv64=5.3.28+dfsg2-9 Downloading dependency 390 of 519: libssh2-1-dev:riscv64=1.11.1-1 Downloading dependency 391 of 519: libpcre2-16-0:riscv64=10.45-1 Downloading dependency 392 of 519: dbus:riscv64=1.16.2-2 Downloading dependency 393 of 519: debconf:riscv64=1.5.91 Downloading dependency 394 of 519: libseccomp2:riscv64=2.6.0-2 Downloading dependency 395 of 519: libcap2:riscv64=1:2.75-7 Downloading dependency 396 of 519: libnghttp3-9:riscv64=1.8.0-1 Downloading dependency 397 of 519: libxext-dev:riscv64=2:1.3.4-1+b3 Downloading dependency 398 of 519: dwz:riscv64=0.15-1+b3 Downloading dependency 399 of 519: libglib2.0-0t64:riscv64=2.84.1-2 Downloading dependency 400 of 519: gir1.2-pango-1.0:riscv64=1.56.3-1 Downloading dependency 401 of 519: libpython3.13-stdlib:riscv64=3.13.3-2 Downloading dependency 402 of 519: ca-certificates-java:riscv64=20240118 Downloading dependency 403 of 519: libgraphite2-3:riscv64=1.3.14-2+b1 Downloading dependency 404 of 519: libxcb-shm0:riscv64=1.17.0-2+b1 Downloading dependency 405 of 519: xtrans-dev:riscv64=1.4.0-1 Downloading dependency 406 of 519: libpaper2:riscv64=2.2.5-0.3+b2 Downloading dependency 407 of 519: libcap-ng0:riscv64=0.8.5-4+b1 Downloading dependency 408 of 519: libdrm-amdgpu1:riscv64=2.4.124-2 Downloading dependency 409 of 519: texlive-plain-generic:riscv64=2024.20250309-2 Downloading dependency 410 of 519: libsynctex2:riscv64=2024.20240313.70630+ds-6 Downloading dependency 411 of 519: t1utils:riscv64=1.41-4+b1 Downloading dependency 412 of 519: libpam-modules:riscv64=1.7.0-3 Downloading dependency 413 of 519: libtirpc-dev:riscv64=1.3.6+ds-1 Downloading dependency 414 of 519: libsasl2-modules-db:riscv64=2.1.28+dfsg1-9 Downloading dependency 415 of 519: hostname:riscv64=3.25 Downloading dependency 416 of 519: libtext-wrapi18n-perl:riscv64=0.06-10 Downloading dependency 417 of 519: mount:riscv64=2.41-4 Downloading dependency 418 of 519: gir1.2-freedesktop-dev:riscv64=1.84.0-1 Downloading dependency 419 of 519: bsdextrautils:riscv64=2.41-4 Downloading dependency 420 of 519: libedit2:riscv64=3.1-20250104-1 Downloading dependency 421 of 519: libatk1.0-0t64:riscv64=2.56.2-1 Downloading dependency 422 of 519: zlib1g:riscv64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 423 of 519: libgfortran5:riscv64=14.2.0-19 Downloading dependency 424 of 519: libgcc-s1:riscv64=14.2.0-19 Downloading dependency 425 of 519: libitm1:riscv64=14.2.0-19 Downloading dependency 426 of 519: libxfixes3:riscv64=1:6.0.0-2+b4 Downloading dependency 427 of 519: libpipeline1:riscv64=1.5.8-1 Downloading dependency 428 of 519: libxfont2:riscv64=1:2.0.6-1+b3 Downloading dependency 429 of 519: libtext-charwidth-perl:riscv64=0.04-11+b4 Downloading dependency 430 of 519: findutils:riscv64=4.10.0-3 Downloading dependency 431 of 519: libunistring5:riscv64=1.3-2 Downloading dependency 432 of 519: libjbig0:riscv64=2.1-6.1+b2 Downloading dependency 433 of 519: automake:riscv64=1:1.17-4 Downloading dependency 434 of 519: libwebpdecoder3:riscv64=1.5.0-0.1 Downloading dependency 435 of 519: libxdmcp-dev:riscv64=1:1.1.5-1 Downloading dependency 436 of 519: libxcb-xfixes0:riscv64=1.17.0-2+b1 Downloading dependency 437 of 519: patch:riscv64=2.8-1 Downloading dependency 438 of 519: libffi-dev:riscv64=3.4.8-2 Downloading dependency 439 of 519: texlive-latex-base:riscv64=2024.20250309-1 Downloading dependency 440 of 519: groff-base:riscv64=1.23.0-7 Downloading dependency 441 of 519: libhogweed6t64:riscv64=3.10.1-1 Downloading dependency 442 of 519: libdpkg-perl:riscv64=1.22.18 Downloading dependency 443 of 519: libssl-dev:riscv64=3.5.0-1 Downloading dependency 444 of 519: libpython3.13-minimal:riscv64=3.13.3-2 Downloading dependency 445 of 519: libpango-1.0-0:riscv64=1.56.3-1 Downloading dependency 446 of 519: libtool:riscv64=2.5.4-4 Downloading dependency 447 of 519: cpp-14-riscv64-linux-gnu:riscv64=14.2.0-19 Downloading dependency 448 of 519: dh-strip-nondeterminism:riscv64=1.14.1-2 Downloading dependency 449 of 519: libdeflate-dev:riscv64=1.23-2 Downloading dependency 450 of 519: libdebhelper-perl:riscv64=13.24.2 Downloading dependency 451 of 519: libkrb5-dev:riscv64=1.21.3-5 Downloading dependency 452 of 519: liblapack-dev:riscv64=3.12.1-2 Downloading dependency 453 of 519: libglvnd0:riscv64=1.7.0-1+b2 Downloading dependency 454 of 519: perl:riscv64=5.40.1-3 Downloading dependency 455 of 519: python3:riscv64=3.13.3-1 Downloading dependency 456 of 519: g++-riscv64-linux-gnu:riscv64=4:14.2.0-1 Downloading dependency 457 of 519: libdatrie1:riscv64=0.2.13-3+b1 Downloading dependency 458 of 519: libxml-namespacesupport-perl:riscv64=1.12-2 Downloading dependency 459 of 519: libxml2:riscv64=2.12.7+dfsg+really2.9.14-0.4 Downloading dependency 460 of 519: texlive-fonts-extra:riscv64=2024.20250309-2 Downloading dependency 461 of 519: libnghttp2-dev:riscv64=1.64.0-1.1 Downloading dependency 462 of 519: libfribidi0:riscv64=1.0.16-1 Downloading dependency 463 of 519: libavahi-client3:riscv64=0.8-16 Downloading dependency 464 of 519: libgmp10:riscv64=2:6.3.0+dfsg-3 Downloading dependency 465 of 519: xorg-sgml-doctools:riscv64=1:1.11-1.1 Downloading dependency 466 of 519: gtk-update-icon-cache:riscv64=4.18.4+ds-2 Downloading dependency 467 of 519: pango1.0-tools:riscv64=1.56.3-1 Downloading dependency 468 of 519: libxshmfence1:riscv64=1.3.3-1 Downloading dependency 469 of 519: libcairo-script-interpreter2:riscv64=1.18.4-1+b1 Downloading dependency 470 of 519: libpng-dev:riscv64=1.6.47-1.1 Downloading dependency 471 of 519: libthai0:riscv64=0.1.29-2+b1 Downloading dependency 472 of 519: libharfbuzz-icu0:riscv64=10.2.0-1+b1 Downloading dependency 473 of 519: libxrender-dev:riscv64=1:0.9.12-1 Downloading dependency 474 of 519: mpack:riscv64=1.6-18+b2 Downloading dependency 475 of 519: x11-common:riscv64=1:7.7+24 Downloading dependency 476 of 519: xdg-utils:riscv64=1.2.1-2 Downloading dependency 477 of 519: libatomic1:riscv64=14.2.0-19 Downloading dependency 478 of 519: libpkgconf3:riscv64=1.8.1-4 Downloading dependency 479 of 519: openjdk-21-jre-headless:riscv64=21.0.7+6-1 Downloading dependency 480 of 519: libdrm-common:riscv64=2.4.124-2 Downloading dependency 481 of 519: libxau6:riscv64=1:1.0.11-1 Downloading dependency 482 of 519: util-linux:riscv64=2.41-4 Downloading dependency 483 of 519: libpsl5t64:riscv64=0.21.2-1.1+b1 Downloading dependency 484 of 519: libcurl4t64:riscv64=8.13.0-5 Downloading dependency 485 of 519: java-common:riscv64=0.76 Downloading dependency 486 of 519: libarchive-zip-perl:riscv64=1.68-1 Downloading dependency 487 of 519: libsasl2-2:riscv64=2.1.28+dfsg1-9 Downloading dependency 488 of 519: libavahi-common-data:riscv64=0.8-16 Downloading dependency 489 of 519: libgssrpc4t64:riscv64=1.21.3-5 Downloading dependency 490 of 519: libexpat1-dev:riscv64=2.7.1-1 Downloading dependency 491 of 519: perl-modules-5.40:riscv64=5.40.1-3 Downloading dependency 492 of 519: libyaml-tiny-perl:riscv64=1.76-1 Downloading dependency 493 of 519: libpangoft2-1.0-0:riscv64=1.56.3-1 Downloading dependency 494 of 519: libdbus-1-3:riscv64=1.16.2-2Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdbus-1-3 riscv64 1.16.2-2 [181 kB] Fetched 181 kB in 0s (1844 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy4nyza45/libdbus-1-3_1.16.2-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libdebconfclient0 riscv64 0.278 [10.3 kB] Fetched 10.3 kB in 0s (152 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfya7k3qk/libdebconfclient0_0.278_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 uuid-dev riscv64 2.41-4 [64.2 kB] Fetched 64.2 kB in 0s (469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo6zw3i3s/uuid-dev_2.41-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 default-jre riscv64 2:1.21-76 [1068 B] Fetched 1068 B in 0s (9953 B/s) dpkg-name: info: moved 'default-jre_2%3a1.21-76_riscv64.deb' to '/srv/rebuilderd/tmp/tmpjb40gp58/default-jre_1.21-76_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 tar riscv64 1.35+dfsg-3.1 [822 kB] Fetched 822 kB in 0s (8041 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkbgr4c1/tar_1.35+dfsg-3.1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 liblzma-dev riscv64 5.8.1-1 [476 kB] Fetched 476 kB in 0s (5112 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd6mtt3sx/liblzma-dev_5.8.1-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gcc-14 riscv64 14.2.0-19 [529 kB] Fetched 529 kB in 0s (7137 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqrfk__e/gcc-14_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libtk8.6 riscv64 8.6.16-1 [799 kB] Fetched 799 kB in 0s (6238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq6dcb0l2/libtk8.6_8.6.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 native-architecture all 0.2.6 [2264 B] Fetched 2264 B in 0s (18.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb_as02cd/native-architecture_0.2.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libubsan1 riscv64 14.2.0-19 [979 kB] Fetched 979 kB in 0s (6405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcje08vq/libubsan1_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB] Fetched 221 kB in 0s (4265 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4yz6y4hy/libcrypt-dev_4.4.38-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 girepository-tools riscv64 2.84.1-2 [144 kB] Fetched 144 kB in 0s (2141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdc8z63k/girepository-tools_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libkdb5-10t64 riscv64 1.21.3-5 [43.4 kB] Fetched 43.4 kB in 0s (556 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wigtnao/libkdb5-10t64_1.21.3-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 python3-minimal riscv64 3.13.3-1 [27.2 kB] Fetched 27.2 kB in 0s (324 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9a0f1e0p/python3-minimal_3.13.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libxtst6 riscv64 2:1.2.5-1 [26.4 kB] Fetched 26.4 kB in 0s (519 kB/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpnjl9jusc/libxtst6_1.2.5-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 cpp-riscv64-linux-gnu riscv64 4:14.2.0-1 [4832 B] Fetched 4832 B in 0s (54.9 kB/s) dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a14.2.0-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpjf7woxqn/cpp-riscv64-linux-gnu_14.2.0-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libmagic-mgc riscv64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (5021 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpcp4tpbb6/libmagic-mgc_5.46-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libglib2.0-dev riscv64 2.84.1-2 [53.7 kB] Fetched 53.7 kB in 0s (680 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl32n7lne/libglib2.0-dev_2.84.1-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libfribidi-dev riscv64 1.0.16-1 [82.6 kB] Fetched 82.6 kB in 0s (836 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0quulng0/libfribidi-dev_1.0.16-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libattr1 riscv64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (430 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpdjfozei8/libattr1_2.5.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgcc-14-dev riscv64 14.2.0-19 [5190 kB] Fetched 5190 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgjnt27zs/libgcc-14-dev_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 openjdk-21-jre riscv64 21.0.7+6-1 [207 kB] Fetched 207 kB in 0s (2156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvjezo4pu/openjdk-21-jre_21.0.7+6-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 gcc-14-base riscv64 14.2.0-19 [49.4 kB] Fetched 49.4 kB in 0s (647 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp56785vmy/gcc-14-base_14.2.0-19_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libp11-kit0 riscv64 0.25.5-3 [444 kB] Fetched 444 kB in 0s (6412 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpauipmhy3/libp11-kit0_0.25.5-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libzstd-dev riscv64 1.5.7+dfsg-1 [1392 kB] Fetched 1392 kB in 0s (9295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyhq78xlo/libzstd-dev_1.5.7+dfsg-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250510T023717Z trixie/main riscv64 libgprofng0 riscv64 2.44-3 [718 kB] Fetched 718 kB in 0s (7286 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_xq9tza1/libgprofng0_2.44-3_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp372q6d8z/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT 127.0.0.1 - - [09/Jul/2025 18:11:40] code 404, message File not found 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45025 ./ InRelease 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:45025 ./ Release [462 B] 127.0.0.1 - - [09/Jul/2025 18:11:40] code 404, message File not found 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45025 ./ Release.gpg 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:45025 ./ Packages [812 kB] Fetched 813 kB in 0s (3948 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./gcc-14-base_14.2.0-19_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:40] "GET /./libc6_2.41-7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libgcc-s1_14.2.0-19_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./mawk_1.3.4.20250131-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./base-files_13.7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libtinfo6_6.5%2b20250216-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./debianutils_5.22_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./bash_5.2.37-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libcap2_2.75-7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libsystemd0_257.5-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./bsdutils_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libacl1_2.3.2-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libattr1_2.5.2-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libgmp10_6.3.0%2bdfsg-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libpcre2-8-0_10.45-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libselinux1_3.8.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libzstd1_1.5.7%2bdfsg-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libssl3t64_3.5.0-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./openssl-provider-legacy_3.5.0-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./coreutils_9.7-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./dash_0.5.12-12_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./diffutils_3.10-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libbz2-1.0_1.0.8-6_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./liblzma5_5.8.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./libmd0_1.1.0-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:41] "GET /./tar_1.35%2bdfsg-3.1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./dpkg_1.22.18_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./findutils_4.10.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./grep_3.11-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./gzip_1.13-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./hostname_3.25_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./ncurses-bin_6.5%2b20250216-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libcrypt1_4.4.38-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./perl-base_5.40.1-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./sed_4.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libaudit-common_4.0.2-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libcap-ng0_0.8.5-4%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libaudit1_4.0.2-2%2bb2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libdb5.3t64_5.3.28%2bdfsg2-9_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libpam0g_1.7.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libpam-modules-bin_1.7.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libpam-modules_1.7.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libpam-runtime_1.7.0-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libblkid1_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libsqlite3-0_3.46.1-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./liblastlog2-2_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libmount1_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libsmartcols1_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libudev1_257.5-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libuuid1_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./util-linux_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libdebconfclient0_0.278_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./base-passwd_3.6.7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./init-system-helpers_1.68_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:42] "GET /./libc-bin_2.41-7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:43] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:11:43] "GET /./sysvinit-utils_3.14-4_riscv64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT 127.0.0.1 - - [09/Jul/2025 18:11:52] code 404, message File not found 127.0.0.1 - - [09/Jul/2025 18:11:52] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45025 ./ InRelease 127.0.0.1 - - [09/Jul/2025 18:11:52] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:45025 ./ Release 127.0.0.1 - - [09/Jul/2025 18:11:52] code 404, message File not found 127.0.0.1 - - [09/Jul/2025 18:11:52] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45025 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./mount_2.41-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./libseccomp2_2.6.0-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./libsystemd-shared_257.5-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./libapparmor1_4.1.0-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./systemd_257.5-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./systemd-sysv_257.5-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./libdbus-1-3_1.16.2-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Jul/2025 18:12:19] "GET /./dbus-bin_1.16.2-2_riscv64.deb HTTP/1.1" 200 - 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I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp372q6d8z/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT Reading package lists... Building dependency tree... Reading state information... libc-bin is already the newest version (2.41-7). bsdutils is already the newest version (1:2.41-4). libxcb-glx0 is already the newest version (1.17.0-2+b1). libxcb-glx0 set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. mesa-libgallium is already the newest version (25.0.4-1). mesa-libgallium set to manually installed. xfonts-base is already the newest version (1:1.0.5+nmu1). xfonts-base set to manually installed. libgirepository-2.0-0 is already the newest version (2.84.1-2). libgirepository-2.0-0 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.9-2). libgnutls-dane0t64 set to manually installed. adwaita-icon-theme is already the newest version (48.0-1). adwaita-icon-theme set to manually installed. libxdamage1 is already the newest version (1:1.1.6-1+b2). libxdamage1 set to manually installed. default-jdk-headless is already the newest version (2:1.21-76). default-jdk-headless set to manually installed. libzzip-0-13t64 is already the newest version (0.13.78+dfsg.1-0.1). libzzip-0-13t64 set to manually installed. libcolord2 is already the newest version (1.4.7-3). libcolord2 set to manually installed. libxmu6 is already the newest version (2:1.1.3-3+b4). libxmu6 set to manually installed. libp11-kit-dev is already the newest version (0.25.5-3). libp11-kit-dev set to manually installed. libtiff6 is already the newest version (4.7.0-3). libtiff6 set to manually installed. libxpm4 is already the newest version (1:3.5.17-1+b3). libxpm4 set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. libc-dev-bin is already the newest version (2.41-7). libc-dev-bin set to manually installed. libldap2 is already the newest version (2.6.9+dfsg-2). libldap2 set to manually installed. python3.13-minimal is already the newest version (3.13.3-2). python3.13-minimal set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. libatk-bridge2.0-0t64 is already the newest version (2.56.2-1). libatk-bridge2.0-0t64 set to manually installed. libpangoxft-1.0-0 is already the newest version (1.56.3-1). libpangoxft-1.0-0 set to manually installed. libgnutls30t64 is already the newest version (3.8.9-2). libgnutls30t64 set to manually installed. libgraphite2-dev is already the newest version (1.3.14-2+b1). libgraphite2-dev set to manually installed. tk8.6-dev is already the newest version (8.6.16-1). tk8.6-dev set to manually installed. dpkg is already the newest version (1.22.18). texlive-luatex is already the newest version (2024.20250309-1). texlive-luatex set to manually installed. libxi6 is already the newest version (2:1.8.2-1). libxi6 set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to manually installed. libgnutls28-dev is already the newest version (3.8.9-2). libgnutls28-dev set to manually installed. libglib2.0-data is already the newest version (2.84.1-2). libglib2.0-data set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-1). libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. libxkbcommon0 is already the newest version (1.7.0-2). libxkbcommon0 set to manually installed. libblkid-dev is already the newest version (2.41-4). libblkid-dev set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b2). libpaper-utils set to manually installed. libxaw7 is already the newest version (2:1.0.16-1). libxaw7 set to manually installed. libsepol-dev is already the newest version (3.8.1-1). libsepol-dev set to manually installed. libgfortran-14-dev is already the newest version (14.2.0-19). libgfortran-14-dev set to manually installed. libpixman-1-0 is already the newest version (0.44.0-3). libpixman-1-0 set to manually installed. libcairo2-dev is already the newest version (1.18.4-1+b1). libcairo2-dev set to manually installed. cpp-14 is already the newest version (14.2.0-19). cpp-14 set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.2+b2). libxt6t64 set to manually installed. texlive-latex-extra is already the newest version (2024.20250309-2). texlive-latex-extra set to manually installed. libncurses6 is already the newest version (6.5+20250216-2). libncurses6 set to manually installed. libnghttp3-dev is already the newest version (1.8.0-1). libnghttp3-dev set to manually installed. libicu-dev is already the newest version (76.1-3). libicu-dev set to manually installed. libselinux1 is already the newest version (3.8.1-1). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. comerr-dev is already the newest version (2.1-1.47.2-1+b1). comerr-dev set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libkadm5srv-mit12 is already the newest version (1.21.3-5). libkadm5srv-mit12 set to manually installed. libfontbox-java is already the newest version (1:1.8.16-5). libfontbox-java set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp-dev set to manually installed. libepoxy0 is already the newest version (1.5.10-2). libepoxy0 set to manually installed. gcc-14-riscv64-linux-gnu is already the newest version (14.2.0-19). gcc-14-riscv64-linux-gnu set to manually installed. diffutils is already the newest version (1:3.10-4). libglx-mesa0 is already the newest version (25.0.4-1). libglx-mesa0 set to manually installed. binutils-riscv64-linux-gnu is already the newest version (2.44-3). binutils-riscv64-linux-gnu set to manually installed. libpcsclite1 is already the newest version (2.3.3-1). libpcsclite1 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-3). libasound2-data is already the newest version (1.2.14-1). libasound2-data set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). build-essential is already the newest version (12.12). build-essential set to manually installed. libuchardet0 is already the newest version (0.0.8-1+b2). libuchardet0 set to manually installed. libicu76 is already the newest version (76.1-3). libicu76 set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. libvulkan1 is already the newest version (1.4.309.0-1). libvulkan1 set to manually installed. dbus-daemon is already the newest version (1.16.2-2). dbus-daemon set to manually installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libcc1-0 is already the newest version (14.2.0-19). libcc1-0 set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. man-db is already the newest version (2.13.0-1). man-db set to manually installed. libpotrace0 is already the newest version (1.16-2+b2). libpotrace0 set to manually installed. gfortran-riscv64-linux-gnu is already the newest version (4:14.2.0-1). gfortran-riscv64-linux-gnu set to manually installed. libstdc++6 is already the newest version (14.2.0-19). libstdc++6 set to manually installed. libexpat1 is already the newest version (2.7.1-1). libexpat1 set to manually installed. cpp is already the newest version (4:14.2.0-1). cpp set to manually installed. krb5-multidev is already the newest version (1.21.3-5). krb5-multidev set to manually installed. libsqlite3-0 is already the newest version (3.46.1-3). libsensors5 is already the newest version (1:3.6.2-2). libsensors5 set to manually installed. libtiff-dev is already the newest version (4.7.0-3). libtiff-dev set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. fonts-lmodern is already the newest version (2.005-1). fonts-lmodern set to manually installed. libuuid1 is already the newest version (2.41-4). texlive-base is already the newest version (2024.20250309-1). texlive-base set to manually installed. tk8.6 is already the newest version (8.6.16-1). tk8.6 set to manually installed. libxt-dev is already the newest version (1:1.2.1-1.2+b2). libxt-dev set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. libproc2-0 is already the newest version (2:4.0.4-8). libproc2-0 set to manually installed. texlive-extra-utils is already the newest version (2024.20250309-2). texlive-extra-utils set to manually installed. libc6 is already the newest version (2.41-7). libfontconfig1-dev is already the newest version (2.15.0-2.3). libfontconfig1-dev set to manually installed. libxkbfile1 is already the newest version (1:1.1.0-1+b4). libxkbfile1 set to manually installed. libwayland-cursor0 is already the newest version (1.23.1-3). libwayland-cursor0 set to manually installed. sensible-utils is already the newest version (0.0.25). sensible-utils set to manually installed. dash is already the newest version (0.5.12-12). libpng16-16t64 is already the newest version (1.6.47-1.1). libpng16-16t64 set to manually installed. libldap-dev is already the newest version (2.6.9+dfsg-2). libldap-dev set to manually installed. gcc is already the newest version (4:14.2.0-1). gcc set to manually installed. libsmartcols1 is already the newest version (2.41-4). libsm-dev is already the newest version (2:1.2.6-1). libsm-dev set to manually installed. libcairo-gobject2 is already the newest version (1.18.4-1+b1). libcairo-gobject2 set to manually installed. libharfbuzz-dev is already the newest version (10.2.0-1+b1). libharfbuzz-dev set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. libpcre2-32-0 is already the newest version (10.45-1). libpcre2-32-0 set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. gir1.2-harfbuzz-0.0 is already the newest version (10.2.0-1+b1). gir1.2-harfbuzz-0.0 set to manually installed. libnss3 is already the newest version (2:3.110-1). libnss3 set to manually installed. libtsan2 is already the newest version (14.2.0-19). libtsan2 set to manually installed. gettext-base is already the newest version (0.23.1-2). gettext-base set to manually installed. libpdfbox-java is already the newest version (1:1.8.16-5). libpdfbox-java set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. init-system-helpers is already the newest version (1.68). fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. xz-utils is already the newest version (5.8.1-1). xz-utils set to manually installed. binutils-common is already the newest version (2.44-3). binutils-common set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp1 set to manually installed. m4 is already the newest version (1.4.19-8). m4 set to manually installed. bash is already the newest version (5.2.37-2). libapache-pom-java is already the newest version (33-2). libapache-pom-java set to manually installed. libblkid1 is already the newest version (2.41-4). libnettle8t64 is already the newest version (3.10.1-1). libnettle8t64 set to manually installed. libharfbuzz-subset0 is already the newest version (10.2.0-1+b1). libharfbuzz-subset0 set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libbinutils is already the newest version (2.44-3). libbinutils set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. libgdk-pixbuf2.0-common is already the newest version (2.42.12+dfsg-2). libgdk-pixbuf2.0-common set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. libperl5.40 is already the newest version (5.40.1-3). libperl5.40 set to manually installed. dh-autoreconf is already the newest version (20). dh-autoreconf set to manually installed. gettext is already the newest version (0.23.1-2). gettext set to manually installed. dconf-gsettings-backend is already the newest version (0.40.0-5). dconf-gsettings-backend set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. base-files is already the newest version (13.7). libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. libmime-charset-perl is already the newest version (1.013.1-2). libmime-charset-perl set to manually installed. libptexenc1 is already the newest version (2024.20240313.70630+ds-6). libptexenc1 set to manually installed. texinfo-lib is already the newest version (7.1.1-1+b1). texinfo-lib set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.9-2). libgnutls-openssl27t64 set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. procps is already the newest version (2:4.0.4-8). procps set to manually installed. libkpathsea6 is already the newest version (2024.20240313.70630+ds-6). libkpathsea6 set to manually installed. libwayland-server0 is already the newest version (1.23.1-3). libwayland-server0 set to manually installed. lmodern is already the newest version (2.005-1). lmodern set to manually installed. libselinux1-dev is already the newest version (3.8.1-1). libselinux1-dev set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b1). libxcb1-dev set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b4). libxinerama1 set to manually installed. ucf is already the newest version (3.0051). ucf set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. libxcomposite1 is already the newest version (1:0.4.6-1). libxcomposite1 set to manually installed. libbz2-dev is already the newest version (1.0.8-6). libbz2-dev set to manually installed. libwayland-client0 is already the newest version (1.23.1-3). libwayland-client0 set to manually installed. libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. libctf-nobfd0 is already the newest version (2.44-3). libctf-nobfd0 set to manually installed. libstdc++-14-dev is already the newest version (14.2.0-19). libstdc++-14-dev set to manually installed. liblastlog2-2 is already the newest version (2.41-4). libpam-systemd is already the newest version (257.5-2). libpam-systemd set to manually installed. libpangocairo-1.0-0 is already the newest version (1.56.3-1). libpangocairo-1.0-0 set to manually installed. libdconf1 is already the newest version (0.40.0-5). libdconf1 set to manually installed. libglib2.0-bin is already the newest version (2.84.1-2). libglib2.0-bin set to manually installed. gcc-riscv64-linux-gnu is already the newest version (4:14.2.0-1). gcc-riscv64-linux-gnu set to manually installed. perl-base is already the newest version (5.40.1-3). fontconfig is already the newest version (2.15.0-2.3). fontconfig set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). tex-common is already the newest version (6.19). tex-common set to manually installed. libidn2-dev is already the newest version (2.3.8-2). libidn2-dev set to manually installed. libsepol2 is already the newest version (3.8.1-1). libsepol2 set to manually installed. bash-completion is already the newest version (1:2.16.0-7). bash-completion set to manually installed. libblas3 is already the newest version (3.12.1-2). libblas3 set to manually installed. dbus-session-bus-common is already the newest version (1.16.2-2). dbus-session-bus-common set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libtinfo6 is already the newest version (6.5+20250216-2). libgdk-pixbuf-2.0-0 is already the newest version (2.42.12+dfsg-2). libgdk-pixbuf-2.0-0 set to manually installed. libtexlua53-5 is already the newest version (2024.20240313.70630+ds-6). libtexlua53-5 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. libaudit1 is already the newest version (1:4.0.2-2+b2). python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-3). libgmpxx4ldbl set to manually installed. sed is already the newest version (4.9-2). tcl8.6-dev is already the newest version (8.6.16+dfsg-1). tcl8.6-dev set to manually installed. openssl-provider-legacy is already the newest version (3.5.0-1). debhelper is already the newest version (13.24.2). debhelper set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.3). libfontconfig1 set to manually installed. libpam-runtime is already the newest version (1.7.0-3). libsframe1 is already the newest version (2.44-3). libsframe1 set to manually installed. dpkg-dev is already the newest version (1.22.18). dpkg-dev set to manually installed. libgio-2.0-dev-bin is already the newest version (2.84.1-2). libgio-2.0-dev-bin set to manually installed. x11-xkb-utils is already the newest version (7.7+9). x11-xkb-utils set to manually installed. x11proto-core-dev is already the newest version (2024.1-1). x11proto-core-dev set to manually installed. libdatrie-dev is already the newest version (0.2.13-3+b1). libdatrie-dev set to manually installed. libpython3-stdlib is already the newest version (3.13.3-1). libpython3-stdlib set to manually installed. liblapack3 is already the newest version (3.12.1-2). liblapack3 set to manually installed. libcom-err2 is already the newest version (1.47.2-1+b1). libcom-err2 set to manually installed. libsombok3 is already the newest version (2.4.0-2+b2). libsombok3 set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-5+b2). libxml-libxml-perl set to manually installed. gir1.2-freedesktop is already the newest version (1.84.0-1). gir1.2-freedesktop set to manually installed. libgbm1 is already the newest version (25.0.4-1). libgbm1 set to manually installed. libffi8 is already the newest version (3.4.8-2). libffi8 set to manually installed. libxcb-render0-dev is already the newest version (1.17.0-2+b1). libxcb-render0-dev set to manually installed. libtirpc-common is already the newest version (1.3.6+ds-1). libtirpc-common set to manually installed. libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. libsystemd-shared is already the newest version (257.5-2). libsystemd-shared set to manually installed. gzip is already the newest version (1.13-1). libmount1 is already the newest version (2.41-4). default-jre-headless is already the newest version (2:1.21-76). default-jre-headless set to manually installed. libmpc3 is already the newest version (1.3.1-1+b3). libmpc3 set to manually installed. libgio-2.0-dev is already the newest version (2.84.1-2). libgio-2.0-dev set to manually installed. libctf0 is already the newest version (2.44-3). libctf0 set to manually installed. dconf-service is already the newest version 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manually installed. preview-latex-style is already the newest version (13.2-1). preview-latex-style set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. tzdata is already the newest version (2025b-2). tzdata set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libsysprof-capture-4-dev is already the newest version (48.0-2). libsysprof-capture-4-dev set to manually installed. xvfb is already the newest version (2:21.1.16-1). xvfb set to manually installed. libcloudproviders0 is already the newest version (0.3.6-2). libcloudproviders0 set to manually installed. liblsan0 is already the newest version (14.2.0-19). liblsan0 set to manually installed. icu-devtools is already the newest version (76.1-3). icu-devtools set to manually installed. libxss-dev is already the newest version (1:1.2.3-1+b3). libxss-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. nettle-dev is already the newest version (3.10.1-1). nettle-dev set to manually installed. libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. dbus-user-session is already the newest version (1.16.2-2). dbus-user-session set to manually installed. libthai-dev is already the newest version (0.1.29-2+b1). libthai-dev set to manually installed. gir1.2-glib-2.0-dev is already the newest version (2.84.1-2). gir1.2-glib-2.0-dev set to manually installed. libunicode-linebreak-perl is already the newest version (0.0.20190101-1+b4). libunicode-linebreak-perl set to manually installed. texlive-latex-recommended is already the newest version (2024.20250309-1). texlive-latex-recommended set to manually installed. libidn2-0 is already the newest version (2.3.8-2). libidn2-0 set to manually installed. grep is already the newest version (3.11-4). 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libharfbuzz0b is already the newest version (10.2.0-1+b1). libharfbuzz0b set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b3). libxrandr2 set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libpcre2-8-0 is already the newest version (10.45-1). libgl1 is already the newest version (1.7.0-1+b2). libgl1 set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b1). libxcb-randr0 set to manually installed. libgtk-3-0t64 is already the newest version (3.24.49-3). libgtk-3-0t64 set to manually installed. linux-libc-dev is already the newest version (6.12.25-1). linux-libc-dev set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libxcb-shm0-dev is already the newest version (1.17.0-2+b1). libxcb-shm0-dev set to manually installed. sysvinit-utils is already the 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already the newest version (10.2.0-1+b1). libharfbuzz-gobject0 set to manually installed. mawk is already the newest version (1.3.4.20250131-1). libtcl8.6 is already the newest version (8.6.16+dfsg-1). libtcl8.6 set to manually installed. debianutils is already the newest version (5.22). libasan8 is already the newest version (14.2.0-19). libasan8 set to manually installed. libcups2t64 is already the newest version (2.4.10-2+b1). libcups2t64 set to manually installed. g++-14-riscv64-linux-gnu is already the newest version (14.2.0-19). g++-14-riscv64-linux-gnu set to manually installed. fontconfig-config is already the newest version (2.15.0-2.3). fontconfig-config set to manually installed. texinfo is already the newest version (7.1.1-1). texinfo set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-3.1). libjpeg62-turbo-dev set to manually installed. libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libelf1t64 is already the newest version (0.192-4). libelf1t64 set to manually installed. openjdk-21-jdk is already the newest version (21.0.7+6-1). openjdk-21-jdk set to manually installed. libcurl4-openssl-dev is already the newest version (8.13.0-5). libcurl4-openssl-dev set to manually installed. media-types is already the newest version (13.0.0). media-types set to manually installed. libfile-homedir-perl is already the newest version (1.006-2). libfile-homedir-perl set to manually installed. libblas-dev is already the newest version (3.12.1-2). libblas-dev set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-3.1). libjpeg62-turbo set to manually installed. libc6-dev is already the newest version (2.41-7). libc6-dev set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-2). dbus-system-bus-common set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b1). libxcb-dri3-0 set to manually installed. g++ is already the newest version (4:14.2.0-1). g++ set to manually installed. libglib2.0-dev-bin is already the newest version (2.84.1-2). libglib2.0-dev-bin set to manually installed. gfortran-14-riscv64-linux-gnu is already the newest version (14.2.0-19). gfortran-14-riscv64-linux-gnu set to manually installed. libgtk-3-common is already the newest version (3.24.49-3). libgtk-3-common set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. at-spi2-common is already the newest version (2.56.2-1). at-spi2-common set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). readline-common is already the newest version (8.2-6). readline-common set to manually installed. libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. g++-14 is already the newest version (14.2.0-19). g++-14 set to manually installed. libice-dev is already the newest version (2:1.1.1-1). libice-dev set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1). libnghttp2-14 set to manually installed. xkb-data is already the newest version (2.42-1). xkb-data set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-3). libgmp-dev set to manually installed. gfortran is already the newest version (4:14.2.0-1). gfortran set to manually installed. libreadline8t64 is already the newest version (8.2-6). libreadline8t64 set to manually installed. dbus-bin is already the newest version (1.16.2-2). dbus-bin set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b1). libxcb-sync1 set to manually installed. systemd-sysv is already the newest version (257.5-2). systemd-sysv set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libapparmor1 is already the newest version (4.1.0-1). libapparmor1 set to manually installed. libaudit-common is already the newest version (1:4.0.2-2). libmpfr6 is already the newest version (4.2.2-1). libmpfr6 set to manually installed. libthai-data is already the newest version (0.1.29-2). libthai-data set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-1+b4). libxxf86vm1 set to manually installed. libdrm2 is already the newest version (2.4.124-2). libdrm2 set to manually installed. systemd is already the newest version (257.5-2). systemd set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. liblcms2-2 is already the newest version (2.16-2). liblcms2-2 set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-3.1). libjpeg-dev set to manually installed. xserver-common is already the newest version (2:21.1.16-1). xserver-common set to manually installed. libpam0g is already the newest version (1.7.0-3). libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. openjdk-21-jdk-headless is already the newest version (21.0.7+6-1). openjdk-21-jdk-headless set to manually installed. libteckit0 is already the newest version (2.5.12+ds1-1+b1). libteckit0 set to manually installed. libpango1.0-dev is already the newest version (1.56.3-1). libpango1.0-dev set to manually installed. libcommons-logging-java is already the newest version (1.3.0-1). libcommons-logging-java set to manually installed. gfortran-14 is already the newest version (14.2.0-19). gfortran-14 set to manually installed. libharfbuzz-cairo0 is already the newest version (10.2.0-1+b1). libharfbuzz-cairo0 set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-4). libmpfi0 set to manually installed. binutils is already the newest version (2.44-3). binutils set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. libmount-dev is already the newest version (2.41-4). libmount-dev set to manually installed. libcommons-parent-java is already the newest version (56-1). libcommons-parent-java set to manually installed. libxft-dev is already the newest version (2.3.6-1+b4). libxft-dev set to manually installed. libz3-4 is already the newest version (4.13.3-1). libz3-4 set to manually installed. liblzma5 is already the newest version (5.8.1-1). libgomp1 is already the newest version (14.2.0-19). libgomp1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.14.1-2). libfile-stripnondeterminism-perl set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. libavahi-common3 is already the newest version (0.8-16). libavahi-common3 set to manually installed. libatspi2.0-0t64 is already the newest version (2.56.2-1). libatspi2.0-0t64 set to manually installed. libxmuu1 is already the newest version (2:1.1.3-3+b4). libxmuu1 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. tcl8.6 is already the newest version (8.6.16+dfsg-1). tcl8.6 set to manually installed. texlive-fonts-recommended is already the newest version (2024.20250309-1). texlive-fonts-recommended set to manually installed. gir1.2-glib-2.0 is already the newest version (2.84.1-2). gir1.2-glib-2.0 set to manually installed. libgif7 is already the newest version (5.2.2-1+b1). libgif7 set to manually installed. liblzo2-2 is already the newest version (2.10-3+b1). liblzo2-2 set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). libwayland-egl1 is already the newest version (1.23.1-3). libwayland-egl1 set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. libjs-jquery is already the newest version (3.6.1+dfsg+~3.5.14-1). libjs-jquery set to manually installed. libunbound8 is already the newest version (1.22.0-1+b1). libunbound8 set to manually installed. libgdbm6t64 is already the newest version (1.24-2). libgdbm6t64 set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. texlive-binaries is already the newest version (2024.20240313.70630+ds-6). texlive-binaries set to manually installed. libncurses-dev is already the newest version (6.5+20250216-2). libncurses-dev set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. libgl1-mesa-dri is already the newest version (25.0.4-1). libgl1-mesa-dri set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-9). libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. libpcre2-16-0 is already the newest version (10.45-1). libpcre2-16-0 set to manually installed. dbus is already the newest version (1.16.2-2). dbus set to manually installed. debconf is already the newest version (1.5.91). libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. libcap2 is already the newest version (1:2.75-7). libnghttp3-9 is already the newest version (1.8.0-1). libnghttp3-9 set to manually installed. libxext-dev is already the newest version (2:1.3.4-1+b3). libxext-dev set to manually installed. dwz is already the newest version (0.15-1+b3). dwz set to manually installed. libglib2.0-0t64 is already the newest version (2.84.1-2). libglib2.0-0t64 set to manually installed. gir1.2-pango-1.0 is already the newest version (1.56.3-1). gir1.2-pango-1.0 set to manually installed. libpython3.13-stdlib is already the newest version (3.13.3-2). libpython3.13-stdlib set to manually installed. ca-certificates-java is already the newest version (20240118). ca-certificates-java set to manually installed. libgraphite2-3 is already the newest version (1.3.14-2+b1). libgraphite2-3 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. xtrans-dev is already the newest version (1.4.0-1). xtrans-dev set to manually installed. libpaper2 is already the newest version (2.2.5-0.3+b2). libpaper2 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libdrm-amdgpu1 is already the newest version (2.4.124-2). libdrm-amdgpu1 set to manually installed. texlive-plain-generic is already the newest version (2024.20250309-2). texlive-plain-generic set to manually installed. libsynctex2 is already the newest version (2024.20240313.70630+ds-6). libsynctex2 set to manually installed. t1utils is already the newest version (1.41-4+b1). t1utils set to manually installed. libpam-modules is already the newest version (1.7.0-3). libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-9). libsasl2-modules-db set to manually installed. hostname is already the newest version (3.25). libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. mount is already the newest version (2.41-4). mount set to manually installed. gir1.2-freedesktop-dev is already the newest version (1.84.0-1). gir1.2-freedesktop-dev set to manually installed. bsdextrautils is already the newest version (2.41-4). bsdextrautils set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. libatk1.0-0t64 is already the newest version (2.56.2-1). libatk1.0-0t64 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libgfortran5 is already the newest version (14.2.0-19). libgfortran5 set to manually installed. libgcc-s1 is already the newest version (14.2.0-19). libitm1 is already the newest version (14.2.0-19). libitm1 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b4). libxfixes3 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libxfont2 is already the newest version (1:2.0.6-1+b3). libxfont2 set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b4). libtext-charwidth-perl set to manually installed. findutils is already the newest version (4.10.0-3). libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. automake is already the newest version (1:1.17-4). automake set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. patch is already the newest version (2.8-1). patch set to manually installed. libffi-dev is already the newest version (3.4.8-2). libffi-dev set to manually installed. texlive-latex-base is already the newest version (2024.20250309-1). texlive-latex-base set to manually installed. groff-base is already the newest version (1.23.0-7). groff-base set to manually installed. libhogweed6t64 is already the newest version (3.10.1-1). libhogweed6t64 set to manually installed. libdpkg-perl is already the newest version (1.22.18). libdpkg-perl set to manually installed. libssl-dev is already the newest version (3.5.0-1). libssl-dev set to manually installed. libpython3.13-minimal is already the newest version (3.13.3-2). libpython3.13-minimal set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-1). libpango-1.0-0 set to manually installed. libtool is already the newest version (2.5.4-4). libtool set to manually installed. cpp-14-riscv64-linux-gnu is already the newest version (14.2.0-19). cpp-14-riscv64-linux-gnu set to manually installed. dh-strip-nondeterminism is already the newest version (1.14.1-2). dh-strip-nondeterminism set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. libdebhelper-perl is already the newest version (13.24.2). libdebhelper-perl set to manually installed. libkrb5-dev is already the newest version (1.21.3-5). libkrb5-dev set to manually installed. liblapack-dev is already the newest version (3.12.1-2). liblapack-dev set to manually installed. libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. perl is already the newest version (5.40.1-3). perl set to manually installed. python3 is already the newest version (3.13.3-1). python3 set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:14.2.0-1). g++-riscv64-linux-gnu set to manually installed. libdatrie1 is already the newest version (0.2.13-3+b1). libdatrie1 set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. libxml2 is already the newest version (2.12.7+dfsg+really2.9.14-0.4). libxml2 set to manually installed. texlive-fonts-extra is already the newest version (2024.20250309-2). texlive-fonts-extra set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1). libnghttp2-dev set to manually installed. libfribidi0 is already the newest version (1.0.16-1). libfribidi0 set to manually installed. libavahi-client3 is already the newest version (0.8-16). libavahi-client3 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-3). xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. gtk-update-icon-cache is already the newest version (4.18.4+ds-2). gtk-update-icon-cache set to manually installed. pango1.0-tools is already the newest version (1.56.3-1). pango1.0-tools set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. libcairo-script-interpreter2 is already the newest version (1.18.4-1+b1). libcairo-script-interpreter2 set to manually installed. libpng-dev is already the newest version (1.6.47-1.1). libpng-dev set to manually installed. libthai0 is already the newest version (0.1.29-2+b1). libthai0 set to manually installed. libharfbuzz-icu0 is already the newest version (10.2.0-1+b1). libharfbuzz-icu0 set to manually installed. libxrender-dev is already the newest version (1:0.9.12-1). libxrender-dev set to manually installed. mpack is already the newest version (1.6-18+b2). mpack set to manually installed. x11-common is already the newest version (1:7.7+24). x11-common set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libatomic1 is already the newest version (14.2.0-19). libatomic1 set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. openjdk-21-jre-headless is already the newest version (21.0.7+6-1). openjdk-21-jre-headless set to manually installed. libdrm-common is already the newest version (2.4.124-2). libdrm-common set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. util-linux is already the newest version (2.41-4). libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. libcurl4t64 is already the newest version (8.13.0-5). libcurl4t64 set to manually installed. java-common is already the newest version (0.76). java-common set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-9). libsasl2-2 set to manually installed. libavahi-common-data is already the newest version (0.8-16). libavahi-common-data set to manually installed. libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libexpat1-dev is already the newest version (2.7.1-1). libexpat1-dev set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-3). perl-modules-5.40 set to manually installed. libyaml-tiny-perl is already the newest version (1.76-1). libyaml-tiny-perl set to manually installed. libpangoft2-1.0-0 is already the newest version (1.56.3-1). libpangoft2-1.0-0 set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libdebconfclient0 is already the newest version (0.278). uuid-dev is already the newest version (2.41-4). uuid-dev set to manually installed. default-jre is already the newest version (2:1.21-76). default-jre set to manually installed. tar is already the newest version (1.35+dfsg-3.1). liblzma-dev is already the newest version (5.8.1-1). liblzma-dev set to manually installed. gcc-14 is already the newest version (14.2.0-19). gcc-14 set to manually installed. libtk8.6 is already the newest version (8.6.16-1). libtk8.6 set to manually installed. native-architecture is already the newest version (0.2.6). native-architecture set to manually installed. libubsan1 is already the newest version (14.2.0-19). libubsan1 set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. girepository-tools is already the newest version (2.84.1-2). girepository-tools set to manually installed. libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. python3-minimal is already the newest version (3.13.3-1). python3-minimal set to manually installed. libxtst6 is already the newest version (2:1.2.5-1). libxtst6 set to manually installed. cpp-riscv64-linux-gnu is already the newest version (4:14.2.0-1). cpp-riscv64-linux-gnu set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libglib2.0-dev is already the newest version (2.84.1-2). libglib2.0-dev set to manually installed. libfribidi-dev is already the newest version (1.0.16-1). libfribidi-dev set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libgcc-14-dev is already the newest version (14.2.0-19). libgcc-14-dev set to manually installed. openjdk-21-jre is already the newest version (21.0.7+6-1). openjdk-21-jre set to manually installed. gcc-14-base is already the newest version (14.2.0-19). libp11-kit0 is already the newest version (0.25.5-3). libp11-kit0 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-1). libzstd-dev set to manually installed. libgprofng0 is already the newest version (2.44-3). libgprofng0 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT (Reading database ... 174139 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.n4E9tPHiWT... I: success in 1276.8941 seconds Downloading dependency 495 of 519: libdebconfclient0:riscv64=0.278 Downloading dependency 496 of 519: uuid-dev:riscv64=2.41-4 Downloading dependency 497 of 519: default-jre:riscv64=2:1.21-76 Downloading dependency 498 of 519: tar:riscv64=1.35+dfsg-3.1 Downloading dependency 499 of 519: liblzma-dev:riscv64=5.8.1-1 Downloading dependency 500 of 519: gcc-14:riscv64=14.2.0-19 Downloading dependency 501 of 519: libtk8.6:riscv64=8.6.16-1 Downloading dependency 502 of 519: native-architecture:riscv64=0.2.6 Downloading dependency 503 of 519: libubsan1:riscv64=14.2.0-19 Downloading dependency 504 of 519: libcrypt-dev:riscv64=1:4.4.38-1 Downloading dependency 505 of 519: girepository-tools:riscv64=2.84.1-2 Downloading dependency 506 of 519: libkdb5-10t64:riscv64=1.21.3-5 Downloading dependency 507 of 519: python3-minimal:riscv64=3.13.3-1 Downloading dependency 508 of 519: libxtst6:riscv64=2:1.2.5-1 Downloading dependency 509 of 519: cpp-riscv64-linux-gnu:riscv64=4:14.2.0-1 Downloading dependency 510 of 519: libmagic-mgc:riscv64=1:5.46-5 Downloading dependency 511 of 519: libglib2.0-dev:riscv64=2.84.1-2 Downloading dependency 512 of 519: libfribidi-dev:riscv64=1.0.16-1 Downloading dependency 513 of 519: libattr1:riscv64=1:2.5.2-3 Downloading dependency 514 of 519: libgcc-14-dev:riscv64=14.2.0-19 Downloading dependency 515 of 519: openjdk-21-jre:riscv64=21.0.7+6-1 Downloading dependency 516 of 519: gcc-14-base:riscv64=14.2.0-19 Downloading dependency 517 of 519: libp11-kit0:riscv64=0.25.5-3 Downloading dependency 518 of 519: libzstd-dev:riscv64=1.5.7+dfsg-1 Downloading dependency 519 of 519: libgprofng0:riscv64=2.44-3 env --chdir=/srv/rebuilderd/tmp/rebuilderdAWEdSB/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1745963799 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildj7gJn8/debrebuild.sbuildrc.ZGFmCpaMkb8z sbuild --build=riscv64 --host=riscv64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildj7gJn8/debrebuild.tar.9RYyJnYw_Xod --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=r-base-4.5.0 /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3 (07 June 2025) on localhost +==============================================================================+ | r-base 4.5.0-3 (riscv64) Wed, 09 Jul 2025 10:32:57 +0000 | +==============================================================================+ Package: r-base Version: 4.5.0-3 Source Version: 4.5.0-3 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildj7gJn8/debrebuild.tar.9RYyJnYw_Xod to /srv/rebuilderd/tmp/tmp.sbuild.8K4pZQAXMs... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Wed, 09 Jul 2025 10:34:46 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Wed, 09 Jul 2025 10:34:54 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk | openjdk-10-jdk, mpack, bash-completion, libtirpc-dev, build-essential Filtered Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack, bash-completion, libtirpc-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-JazYun/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Wed, 09 Jul 2025 10:35:10 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment Wed, 09 Jul 2025 10:35:12 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.6.87-win2030 #2025.04.20.18.43+bb0c69aea SMP Sun Apr 20 18:58:14 UTC 2025 riscv64 (riscv64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++6_14.2.0-19 linux-libc-dev_6.12.25-1 Package versions: adwaita-icon-theme_48.0-1 at-spi2-common_2.56.2-1 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-2 bash-completion_1:2.16.0-7 binutils_2.44-3 binutils-common_2.44-3 binutils-riscv64-linux-gnu_2.44-3 bison_2:3.8.2+dfsg-1+b2 bsdextrautils_2.41-4 bsdutils_1:2.41-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 ca-certificates-java_20240118 comerr-dev_2.1-1.47.2-1+b1 coreutils_9.7-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-riscv64-linux-gnu_14.2.0-19 cpp-riscv64-linux-gnu_4:14.2.0-1 dash_0.5.12-12 dbus_1.16.2-2 dbus-bin_1.16.2-2 dbus-daemon_1.16.2-2 dbus-session-bus-common_1.16.2-2 dbus-system-bus-common_1.16.2-2 dbus-user-session_1.16.2-2 dconf-gsettings-backend_0.40.0-5 dconf-service_0.40.0-5 debconf_1.5.91 debhelper_13.24.2 debianutils_5.22 default-jdk_2:1.21-76 default-jdk-headless_2:1.21-76 default-jre_2:1.21-76 default-jre-headless_2:1.21-76 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b3 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.3 fontconfig-config_2.15.0-2.3 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-riscv64-linux-gnu_14.2.0-19 g++-riscv64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-riscv64-linux-gnu_14.2.0-19 gcc-riscv64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 gfortran_4:14.2.0-1 gfortran-14_14.2.0-19 gfortran-14-riscv64-linux-gnu_14.2.0-19 gfortran-riscv64-linux-gnu_4:14.2.0-1 gir1.2-freedesktop_1.84.0-1 gir1.2-freedesktop-dev_1.84.0-1 gir1.2-glib-2.0_2.84.1-2 gir1.2-glib-2.0-dev_2.84.1-2 gir1.2-harfbuzz-0.0_10.2.0-1+b1 gir1.2-pango-1.0_1.56.3-1 girepository-tools_2.84.1-2 grep_3.11-4 groff-base_1.23.0-7 gtk-update-icon-cache_4.18.4+ds-2 gzip_1.13-1 hicolor-icon-theme_0.18-2 hostname_3.25 icu-devtools_76.1-3 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 java-common_0.76 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libapache-pom-java_33-2 libapparmor1_4.1.0-1 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasound2-data_1.2.14-1 libasound2t64_1.2.14-1 libatk-bridge2.0-0t64_2.56.2-1 libatk1.0-0t64_2.56.2-1 libatomic1_14.2.0-19 libatspi2.0-0t64_2.56.2-1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libavahi-client3_0.8-16 libavahi-common-data_0.8-16 libavahi-common3_0.8-16 libbinutils_2.44-3 libblas-dev_3.12.1-2 libblas3_3.12.1-2 libblkid-dev_2.41-4 libblkid1_2.41-4 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-7 libc-dev-bin_2.41-7 libc6_2.41-7 libc6-dev_2.41-7 libcairo-gobject2_1.18.4-1+b1 libcairo-script-interpreter2_1.18.4-1+b1 libcairo2_1.18.4-1+b1 libcairo2-dev_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-7 libcc1-0_14.2.0-19 libcloudproviders0_0.3.6-2 libcolord2_1.4.7-3 libcom-err2_1.47.2-1+b1 libcommons-logging-java_1.3.0-1 libcommons-parent-java_56-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcups2t64_2.4.10-2+b1 libcurl4-openssl-dev_8.13.0-5 libcurl4t64_8.13.0-5 libdatrie-dev_0.2.13-3+b1 libdatrie1_0.2.13-3+b1 libdb5.3t64_5.3.28+dfsg2-9 libdbus-1-3_1.16.2-2 libdconf1_0.40.0-5 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdpkg-perl_1.22.18 libdrm-amdgpu1_2.4.124-2 libdrm-common_2.4.124-2 libdrm2_2.4.124-2 libedit2_3.1-20250104-1 libelf1t64_0.192-4 libepoxy0_1.5.10-2 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.1-1 libexpat1-dev_2.7.1-1 libffi-dev_3.4.8-2 libffi8_3.4.8-2 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.1-2 libfile-which-perl_1.27-2 libfontbox-java_1:1.8.16-5 libfontconfig-dev_2.15.0-2.3 libfontconfig1_2.15.0-2.3 libfontconfig1-dev_2.15.0-2.3 libfontenc1_1:1.1.8-1+b2 libfreetype-dev_2.13.3+dfsg-1 libfreetype6_2.13.3+dfsg-1 libfribidi-dev_1.0.16-1 libfribidi0_1.0.16-1 libgbm1_25.0.4-1 libgcc-14-dev_14.2.0-19 libgcc-s1_14.2.0-19 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgdk-pixbuf-2.0-0_2.42.12+dfsg-2 libgdk-pixbuf2.0-common_2.42.12+dfsg-2 libgfortran-14-dev_14.2.0-19 libgfortran5_14.2.0-19 libgif7_5.2.2-1+b1 libgio-2.0-dev_2.84.1-2 libgio-2.0-dev-bin_2.84.1-2 libgirepository-2.0-0_2.84.1-2 libgl1_1.7.0-1+b2 libgl1-mesa-dri_25.0.4-1 libglib2.0-0t64_2.84.1-2 libglib2.0-bin_2.84.1-2 libglib2.0-data_2.84.1-2 libglib2.0-dev_2.84.1-2 libglib2.0-dev-bin_2.84.1-2 libglvnd0_1.7.0-1+b2 libglx-mesa0_25.0.4-1 libglx0_1.7.0-1+b2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-19 libgprofng0_2.44-3 libgraphite2-3_1.3.14-2+b1 libgraphite2-dev_1.3.14-2+b1 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libgtk-3-0t64_3.24.49-3 libgtk-3-common_3.24.49-3 libharfbuzz-cairo0_10.2.0-1+b1 libharfbuzz-dev_10.2.0-1+b1 libharfbuzz-gobject0_10.2.0-1+b1 libharfbuzz-icu0_10.2.0-1+b1 libharfbuzz-subset0_10.2.0-1+b1 libharfbuzz0b_10.2.0-1+b1 libhogweed6t64_3.10.1-1 libice-dev_2:1.1.1-1 libice6_2:1.1.1-1 libicu-dev_76.1-3 libicu76_76.1-3 libidn2-0_2.3.8-2 libidn2-dev_2.3.8-2 libisl23_0.27-1 libitm1_14.2.0-19 libjansson4_2.14-2+b3 libjbig-dev_2.1-6.1+b2 libjbig0_2.1-6.1+b2 libjpeg-dev_1:2.1.5-3.1 libjpeg62-turbo_1:2.1.5-3.1 libjpeg62-turbo-dev_1:2.1.5-3.1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libk5crypto3_1.21.3-5 libkadm5clnt-mit12_1.21.3-5 libkadm5srv-mit12_1.21.3-5 libkdb5-10t64_1.21.3-5 libkeyutils1_1.6.3-6 libkpathsea6_2024.20240313.70630+ds-6 libkrb5-3_1.21.3-5 libkrb5-dev_1.21.3-5 libkrb5support0_1.21.3-5 liblapack-dev_3.12.1-2 liblapack3_3.12.1-2 liblastlog2-2_2.41-4 liblcms2-2_2.16-2 libldap-dev_2.6.9+dfsg-2 libldap2_2.6.9+dfsg-2 liblerc-dev_4.0.0+ds-5 liblerc4_4.0.0+ds-5 libllvm19_1:19.1.7-3 liblsan0_14.2.0-19 liblzma-dev_5.8.1-1 liblzma5_5.8.1-1 liblzo2-2_2.10-3+b1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmime-charset-perl_1.013.1-2 libmount-dev_2.41-4 libmount1_2.41-4 libmpc3_1.3.1-1+b3 libmpfi0_1.5.4+ds-4 libmpfr6_4.2.2-1 libncurses-dev_6.5+20250216-2 libncurses6_6.5+20250216-2 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1.1 libnghttp2-dev_1.64.0-1.1 libnghttp3-9_1.8.0-1 libnghttp3-dev_1.8.0-1 libnspr4_2:4.36-1 libnss3_2:3.110-1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam-systemd_257.5-2 libpam0g_1.7.0-3 libpango-1.0-0_1.56.3-1 libpango1.0-dev_1.56.3-1 libpangocairo-1.0-0_1.56.3-1 libpangoft2-1.0-0_1.56.3-1 libpangoxft-1.0-0_1.56.3-1 libpaper-utils_2.2.5-0.3+b2 libpaper2_2.2.5-0.3+b2 libpcre2-16-0_10.45-1 libpcre2-32-0_10.45-1 libpcre2-8-0_10.45-1 libpcre2-dev_10.45-1 libpcre2-posix3_10.45-1 libpcsclite1_2.3.3-1 libpdfbox-java_1:1.8.16-5 libperl5.40_5.40.1-3 libpipeline1_1.5.8-1 libpixman-1-0_0.44.0-3 libpixman-1-dev_0.44.0-3 libpkgconf3_1.8.1-4 libpng-dev_1.6.47-1.1 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xauth_1:1.1.2-1.1 xdg-utils_1.2.1-2 xfonts-base_1:1.0.5+nmu1 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xkb-data_2.42-1 xorg-sgml-doctools_1:1.11-1.1 xserver-common_2:21.1.16-1 xtrans-dev_1.4.0-1 xvfb_2:21.1.16-1 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Wed, 09 Jul 2025 10:35:12 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: r-base Binary: r-base, r-base-core, r-base-dev, r-mathlib, r-base-html, r-doc-pdf, r-doc-html, r-doc-info, r-recommended Architecture: any all Version: 4.5.0-3 Maintainer: Dirk Eddelbuettel Homepage: http://www.r-project.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/edd/r-base Vcs-Git: https://salsa.debian.org/edd/r-base.git Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk [!arm !hppa !kfreebsd-any !hurd-any] | openjdk-10-jdk [!arm !hppa !kfreebsd-any !hurd-any], mpack, bash-completion, libtirpc-dev Package-List: r-base deb gnu-r optional arch=all r-base-core deb gnu-r optional arch=any r-base-dev deb gnu-r optional arch=all r-base-html deb doc optional arch=all r-doc-html deb doc optional arch=all r-doc-info deb doc optional arch=all r-doc-pdf deb 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Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1745963799 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-base dpkg-buildpackage: info: source version 4.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean *** clean *** dh_testdir dh_testroot rm -f configure-stamp \ build-stamp build-indep-stamp build-arch-stamp \ make-stamp make-arch-stamp make-indep-stamp \ install-indep-stamp install-arch-stamp \ check-stamp [ ! -f Makefile ] || /usr/bin/make distclean rm -f `find . -name "*~"` rm -rf debian/tmp debian/files debian/files* core debian/substvars debian/files rm -f doc/html/function.html doc/html/packages.html rm -f modules/*.so src/unix/Rscript dh_clean debian/rules binary-arch *** configure *** #automake #autoconf dh_testdir R_SHELL=/bin/bash \ mkdir_p="/bin/mkdir -p" \ MKDIR_P="/bin/mkdir -p" \ R_TEXI2DVICMD=emulation \ R_PAPERSIZE=letter \ R_BROWSER=xdg-open \ R_BZIPCMD=/bin/bzip2 \ R_GZIPCMD="/bin/gzip -n" \ PAGER=/usr/bin/pager \ PERL=/usr/bin/perl \ JAVA_HOME=/usr/lib/jvm/default-java \ R_UNZIPCMD=/usr/bin/unzip \ R_ZIPCMD=/usr/bin/zip \ R_PRINTCMD=/usr/bin/lpr \ TAR=/bin/tar \ LIBnn=lib \ AWK=/usr/bin/awk \ DD=/bin/dd \ GREP=/bin/grep \ FGREP="/bin/grep -F" \ EGREP="/bin/grep -E" \ SED=/bin/sed \ GETWD="/bin/pwd" \ CC=gcc \ CXX=g++ \ F77=gfortran \ FC=gfortran \ CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong" \ CPPFLAGS= \ LDFLAGS="-Wl,-z,relro" \ FLIBS= \ rsharedir=/usr/share/R/share \ rincludedir=/usr/share/R/include \ rdocdir=/usr/share/R/doc \ ./configure --prefix=/usr \ --with-cairo \ --with-jpeglib \ --with-readline \ --with-tcltk \ --mandir=/usr/share/man \ --infodir=/usr/share/info \ --datadir=/usr/share/R/share \ --includedir=/usr/share/R/include \ --with-blas \ --with-lapack \ --enable-long-double \ --enable-R-profiling \ --enable-R-shlib \ --enable-memory-profiling \ --without-recommended-packages \ --build riscv64-linux-gnu checking build system type... riscv64-unknown-linux-gnu checking host system type... riscv64-unknown-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for /usr/bin/pager... /usr/bin/pager checking for /bin/tar... /bin/tar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 6.1... yes checking for ginstall-info... no checking for install-info... no checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /bin/gzip -n checking for bzip2... /bin/bzip2 using default browser ... xdg-open checking for xdg-open... 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(cached) /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc -std=gnu23... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-unknown-linux-gnu file names to riscv64-unknown-linux-gnu format... func_convert_file_noop checking how to convert riscv64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... /usr/bin/awk checking command to parse /usr/bin/nm -B output from gcc -std=gnu23 object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc -std=gnu23 supports -fno-rtti -fno-exceptions... no checking for gcc -std=gnu23 option to produce PIC... -fPIC -DPIC checking if gcc -std=gnu23 PIC flag -fPIC -DPIC works... yes checking if gcc -std=gnu23 static flag -static works... yes checking if gcc -std=gnu23 supports -c -o file.o... yes checking if gcc -std=gnu23 supports -c -o file.o... (cached) yes checking whether the gcc -std=gnu23 linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for cos in -lm... yes checking for sin in -lm... yes checking for dlopen in -ldl... yes checking for readline/history.h... yes checking for readline/readline.h... yes checking for rl_callback_read_char in -lreadline... yes checking for history_truncate_file... yes checking for tilde_expand_word... yes checking whether rl_completion_matches exists and is declared... yes checking whether rl_resize_terminal exists and is declared... yes checking whether rl_sort_completion_matches exists and is declared... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for sys/wait.h that is POSIX.1 compatible... yes checking for dlfcn.h... (cached) yes checking for fcntl.h... yes checking for glob.h... yes checking for grp.h... yes checking for pwd.h... yes checking for sched.h... yes checking for strings.h... 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verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/riscv64-linux-gnu/14 -L/lib/riscv64-linux-gnu -L/usr/lib/riscv64-linux-gnu -lgfortran -lm checking how to get verbose linking output from gcc -std=gnu23... -v checking for C libraries of gcc -std=gnu23... -L/usr/lib/gcc/riscv64-linux-gnu/14 -L/lib/riscv64-linux-gnu -L/usr/lib/riscv64-linux-gnu -lgcc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... yes checking whether gfortran appends extra underscores to external names... no checking whether mixed C/Fortran code can be run... yes checking whether gfortran and gcc -std=gnu23 agree on int and double... yes checking whether gfortran and gcc -std=gnu23 agree on double complex... yes checking for gfortran option to support OpenMP... -fopenmp checking whether g++ 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checking for working alloca.h... yes checking for alloca... yes checking whether alloca is declared... yes checking whether expm1 exists and is declared... yes checking whether hypot exists and is declared... yes checking whether log1p exists and is declared... yes checking whether log1pl exists and is declared... yes checking whether log2 exists and is declared... yes checking whether log10 exists and is declared... yes checking whether nearbyint exists and is declared... yes checking whether nearbyintl exists and is declared... yes checking whether powl exists and is declared... yes checking whether rintl exists and is declared... yes checking whether va_copy exists and is declared... yes checking for isblank... yes checking for sunmath.h... no checking for cospi in -lsunmath... no checking for atanpi... yes checking for atan2pi... yes checking for cospi... yes checking for exp10... yes checking for pown... no checking for sinpi... yes checking for tanpi... yes checking for 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yes checking whether cpow exists and is declared... yes checking whether ccos exists and is declared... yes checking whether csin exists and is declared... yes checking whether ctan exists and is declared... yes checking whether cacos exists and is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for working ctanh... yes checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes configure: searching for an external BLAS configure: searching for BLAS in default libraries checking for dgemm_... no configure: searching for OpenBLAS checking for sgemm_ in -lopenblas... no configure: searching for BLIS checking for sgemm_ in -lblis... no configure: searching for ATLAS checking for ATL_xerbla in -latlas... no configure: searching for PhiPACK checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no configure: searching for IBM ESSL checking for dgemm_ in -lblas... 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(cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... no checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.6/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.6/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... no checking for tirpc/rpc/types.h... yes checking for tirpc/rpc/xdr.h... yes checking for XDR library... -ltirpc checking for XDR support... yes checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for ZSTD_versionNumber in -lzstd... yes checking for zstd.h... yes checking if zstd version >= 1.3.3... yes checking for ZSTD_decompressBound... yes checking for libdeflate.h... yes checking for libdeflate_alloc_compressor in -ldeflate... yes yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for curl-config... /usr/bin/curl-config checking libcurl version ... 8.13.0 checking for curl/curl.h... yes checking if libcurl is >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for gcc -std=gnu23 option to enable large file support... none needed checking for declarations of fseeko and ftello... yes checking whether KERN_USRSTACK sysctl is supported... no checking for visible __lib_stack_end... yes checking for paperconf... /usr/bin/paperconf checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for ranlib... (cached) ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc -std=gnu23... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for shared library run path origin... done checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) yes checking for munmap... yes checking for stpcpy... (cached) yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... yes checking for argz_stringify... yes checking for argz_next... yes checking for __fsetlocking... yes checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... yes checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... bison checking version of bison... 3.8.2, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/bash configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for riscv64-unknown-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -std=gnu23 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 Fortran fixed-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong Default C++ compiler: g++ -std=gnu++17 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 Fortran free-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(generic), LAPACK(generic), curl, libdeflate Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, libdeflate for lazyload Capabilities skipped: Options not enabled: shared BLAS Recommended packages: no touch configure-stamp *** make-arch *** /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong" \ CC=gcc \ CXX=g++ \ F77=gfortran \ LDFLAGS="-Wl,-z,relro" \ PKG_BUILT_STAMP="""" \ R_GZIPCMD="/bin/gzip -n" \ R make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' creating src/scripts/R.fe make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- ../../bin make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' mkdir -p -- ../../include make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regexec.c -o regexec.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o ranlib libtre.a make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c uncmin.c -o uncmin.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dchdc.f -o dchdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dpbfa.f -o dpbfa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dpbsl.f -o dpbsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dpoco.f -o dpoco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dpodi.f -o dpodi.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dpofa.f -o dpofa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dposl.f -o dposl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dqrdc.f -o dqrdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dqrdc2.f -o dqrdc2.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dqrls.f -o dqrls.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dqrsl.f -o dqrsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dqrutl.f -o dqrutl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dsvdc.f -o dsvdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dtrco.f -o dtrco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c CommandLineArgs.c -o CommandLineArgs.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rdynload.c -o Rdynload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Renviron.c -o Renviron.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RNG.c -o RNG.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c agrep.c -o agrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c altclasses.c -o altclasses.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c altrep.c -o altrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c apply.c -o apply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arithmetic.c -o arithmetic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c array.c -o array.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c attrib.c -o attrib.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bind.c -o bind.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c builtin.c -o builtin.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c character.c -o character.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c coerce.c -o coerce.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c complex.c -o complex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c connections.c -o connections.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c context.c -o context.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cum.c -o cum.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dcf.c -o dcf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c datetime.c -o datetime.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c debug.c -o debug.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deparse.c -o deparse.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dotcode.c -o dotcode.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dounzip.c -o dounzip.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dstruct.c -o dstruct.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c duplicate.c -o duplicate.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c edit.c -o edit.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c engine.c -o engine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c envir.c -o envir.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c errors.c -o errors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c eval.c -o eval.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c flexiblas.c -o flexiblas.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c format.c -o format.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gevents.c -o gevents.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gram.c -o gram.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gram-ex.c -o gram-ex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c grep.c -o grep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c identical.c -o identical.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c inlined.c -o inlined.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c inspect.c -o inspect.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c internet.c -o internet.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c iosupport.c -o iosupport.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lapack.c -o lapack.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c list.c -o list.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c localecharset.c -o localecharset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c logic.c -o logic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c machine.c -o machine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o main.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mapply.c -o mapply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c match.c -o match.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c memory.c -o memory.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c names.c -o names.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c objects.c -o objects.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c options.c -o options.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c paste.c -o paste.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c platform.c -o platform.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plotmath.c -o plotmath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c print.c -o print.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printarray.c -o printarray.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printvector.c -o printvector.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c printutils.c -o printutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c qsort.c -o qsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c radixsort.c -o radixsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c raw.c -o raw.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c registration.c -o registration.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c relop.c -o relop.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rlocale.c -o rlocale.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c saveload.c -o saveload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c scan.c -o scan.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c seq.c -o seq.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c serialize.c -o serialize.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sort.c -o sort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c source.c -o source.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c split.c -o split.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sprintf.c -o sprintf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c startup.c -o startup.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subassign.c -o subassign.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subscript.c -o subscript.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c summary.c -o summary.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sysutils.c -o sysutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c times.c -o times.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c unique.c -o unique.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c version.c -o version.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_alab_her.c -o g_alab_her.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_cntrlify.c -o g_cntrlify.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_fontdb.c -o g_fontdb.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c g_her_glyph.c -o g_her_glyph.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c xxxpr.f -o xxxpr.o gcc -shared -fopenmp -Wl,-z,relro -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lreadline -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/bin/exec mkdir -p -- /build/reproducible-path/r-base-4.5.0/lib make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -o R.bin Rmain.o -lR make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/modules make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' making Lapack.d from Lapack.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -o lapack.so Lapack.o flexiblas.o -lR -llapack -lblas -lgfortran -lm make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' gcc -I/usr/include/libpng16 -I/usr/include/riscv64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/riscv64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I/usr/include/riscv64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/riscv64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I/usr/include/riscv64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/riscv64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm gcc -I/usr/include/libpng16 -I/usr/include/riscv64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/riscv64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- ../../library make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' mkdir -p -- ../../../library/base/demo make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' mkdir -p -- ../../../library/tools/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c making Rsha256.d from Rsha256.c making sha256.d from sha256.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pdscan.c -o pdscan.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Rsha256.c -o Rsha256.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sha256.c -o sha256.o gcc -shared -L../../../../lib -Wl,-z,relro -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o Rsha256.o sha256.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' byte-compiling package 'compiler' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' byte-compiling package 'base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' byte-compiling package 'tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' byte-compiling package 'utils' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/riscv64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lcairo -lpng16 -L"../../../../../lib" -lR -lm make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' byte-compiling package 'grDevices' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' byte-compiling package 'graphics' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats mkdir -p -- ../../../library/stats/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' mkdir -p -- ../../../library/stats/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c influence.c -o influence.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c loessf.f -o loessf.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c ppr.f -o ppr.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c sgram.f -o sgram.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c hclust.f -o hclust.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c kmns.f -o kmns.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c eureka.f -o eureka.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c stl.f -o stl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c portsrc.f -o portsrc.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -c lminfl.f -o lminfl.o gcc -shared -L../../../../lib -Wl,-z,relro -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' byte-compiling package 'stats' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' mkdir -p -- ../../../library/methods/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' mkdir -p -- ../../../library/grid/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' byte-compiling package 'grid' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' mkdir -p -- ../../../library/splines/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -o splines.so splines.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' byte-compiling package 'splines' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' byte-compiling package 'stats4' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/riscv64-linux-gnu -ltcl8.6 -L/usr/lib/riscv64-linux-gnu -ltk8.6 -lX11 -lXss -lXext -lm -L../../../../lib -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' byte-compiling package 'tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' byte-compiling package 'parallel' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/nmath/standalone; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ R_GZIPCMD="/bin/gzip -n" \ libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \ shared static ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' (cd ../../include; /usr/bin/make Rmath.h) make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' Copying source files make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' R_GZIPCMD="/bin/gzip -n" \ /usr/bin/make docs R_CMD_BUILD_HELP_OPTS="--txt --example" make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' creating doc/NEWS creating doc/NEWS.pdf make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' installing parsed Rd make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' building/updating package metadata ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' writing package indices make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' /usr/bin/make javaconf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0' configuring Java ... Java interpreter : /usr/lib/jvm/default-java/bin/java Java version : 21.0.7 Java home path : /usr/lib/jvm/default-java Java compiler : /usr/lib/jvm/default-java/bin/javac Java headers gen.: Java archive tool: /usr/lib/jvm/default-java/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ make[3]: Entering directory '/tmp/Rjavareconf.qJI7Gy' gcc -std=gnu23 -I"/build/reproducible-path/r-base-4.5.0/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c conftest.c -o conftest.o gcc -std=gnu23 -shared -L/build/reproducible-path/r-base-4.5.0/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/server -ljvm -L/build/reproducible-path/r-base-4.5.0/lib -lR make[3]: Leaving directory '/tmp/Rjavareconf.qJI7Gy' JAVA_HOME : /usr/lib/jvm/default-java Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /build/reproducible-path/r-base-4.5.0 Done. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' touch make-arch-stamp *** install-arch *** dh_testdir dh_testroot dh_prep -a dh_installdirs -A /build/reproducible-path/r-base-4.5.0/debian/r-base-core /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' installing doc ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/man/man1 make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' installing doc/html ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/html make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' installing doc/manual ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual/images make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc installing etc ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' installing share ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/R mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/dictionaries mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/encodings mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/java mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/licenses mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/make mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd/macros mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/tex/latex make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/pkgconfig make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin/exec make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/modules make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/library installing packages ... building HTML index ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/unix; \ rm -vf Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ RHOME=/usr/lib/R \ DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core \ install-Rscript ) removed 'Rscript' removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/unix=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings src/unix/Rscript cp -vax src/unix/Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ 'src/unix/Rscript' -> '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript (cd src/nmath/standalone; \ /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' chmod a+x /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh/echo.sh rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/; \ ln -s ../../share/common-licenses/GPL-2 COPYING) rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc; \ ln -s ../../../share/common-licenses/GPL-2 COPYING) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/texmf/tex/latex && \ ln -s ../../../R/share/texmf R) dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html dh_movefiles --sourcedir=debian/r-base-core -pr-base-html make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ rdocdir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc \ install-pdf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ............................................ collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ................ collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'tcltk' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'compiler' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'parallel' ... Converting parsed Rd's to LaTeX . PDF/LaTeX documentation: full reference index ... This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2024-11-01> patch level 2 L3 programming layer <2025-01-18> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2024/06/29 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/mathrsfs.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty `inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex))))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) Writing index file fullrefman.idx (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) No file fullrefman.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf- dist/fonts/enc/dvips/base/8r.enc}] No file fullrefman.toc. (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [1{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.knitr} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.restore} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.setup} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.ncols} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.mathjaxr} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi st, replaced by a fixed one 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Output written on tctt0900.600gf (128 characters, 17564 bytes). Transcript written on tctt0900.log. mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk: successfully generated. Output written on fullrefman.pdf (2371 pages, 5991986 bytes). Transcript written on fullrefman.log. This is makeindex, version 2.17 [TeX Live 2025/dev] (kpathsea + Thai support). Scanning input file fullrefman.idx...................done (15285 entries accepted, 40 rejected). Sorting entries..................................................................................................................................................................done (237989 comparisons). Generating output file fullrefman.ind..................done (15259 lines written, 52 warnings). Output written in fullrefman.ind. Transcript written in fullrefman.ilg. 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2297] [2298] [2299] [2300] [2301] [2302] [2303] Underfull \hbox (badness 4060) in paragraph at lines 12361--12364 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12384--12384 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2304] [2305] [2306] [2307] Underfull \hbox (badness 2150) in paragraph at lines 12639--12641 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2308] [2309] [2310] [2311] Underfull \hbox (badness 10000) in paragraph at lines 12859--12863 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12892--12898 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2312] Underfull \hbox (badness 2762) in paragraph at lines 12907--12913 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2313] [2314] Underfull \hbox (badness 1009) in paragraph at lines 13082--13094 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 13122--13124 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2315] Underfull \hbox (badness 1077) in paragraph at lines 13152--13159 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2316] [2317] [2318] [2319] [2320] [2321] Underfull \hbox (badness 3780) in paragraph at lines 13577--13583 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via [2322] Underfull \hbox (badness 2635) in paragraph at lines 13595--13598 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2323] [2324] [2325] Underfull \hbox (badness 2302) in paragraph at lines 13805--13807 []\T1/ptm/m/n/10 Convert file paths to the short form. 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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one Output written on fullrefman.pdf (2486 pages, 6747710 bytes). Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-FAQ.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] [-1] Chapter 1 Chapter 2 [1] Cross reference values unknown; you must run TeX again. [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 351611 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.aux) Chapter 2 [1] [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 368707 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-admin.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] [70] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] No file R-admin.vrs. (Environment variable index) [81] No file R-admin.ens. (Concept index) [82] No file R-admin.cps. [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (86 pages, 477370 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] [70] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.vrs) (Environment variable index) [81] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.ens) (Concept index) [82] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.cps) [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (88 pages, 520179 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-data.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) [1] Chapter 1 [2] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] No file R-data.vrs. (Concept index) [34] No file R-data.cps. [35] ) (see the transcript file for additional information) Output written on R-data.pdf (38 pages, 266610 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302828 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302838 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-exts.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] No file R-exts.vrs. (API index) [243] No file R-exts.aps. (Fortran API index) [244] No file R-exts.fors. (Experimental API index) [245] No file R-exts.aes. (Embedding API index) [246] No file R-exts.ems. (Concept index) [247] No file R-exts.cps. [248] ) (see the transcript file for additional information) Output written on R-exts.pdf (251 pages, 1034530 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134748 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134563 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-intro.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] No file R-intro.vrs. (Concept index) [103] No file R-intro.cps. [104] ) (see the transcript file for additional information) Output written on R-intro.pdf (107 pages, 573034 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624704 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624699 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-ints.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] No file R-ints.vrs. (Concept index) [75] No file R-ints.cps. [76] ) (see the transcript file for additional information) Output written on R-ints.pdf (79 pages, 422153 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470788 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470782 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-lang.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] No file R-lang.vrs. (Concept index) [61] No file R-lang.cps. [62] ) (see the transcript file for additional information) Output written on R-lang.pdf (65 pages, 348665 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391239 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391235 bytes). Transcript written on R-lang.log. installing R manuals in PDF format ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ infodir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info install-info make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' /usr/bin/texi2any --enable-encoding -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -I. R-admin.texi /usr/bin/texi2any --enable-encoding -I. R-data.texi /usr/bin/texi2any --enable-encoding -I. R-exts.texi /usr/bin/texi2any --enable-encoding -I. R-intro.texi /usr/bin/texi2any --enable-encoding -I. R-ints.texi /usr/bin/texi2any --enable-encoding -I. R-lang.texi mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info /usr/bin/install -c -m 644 "./dir" "/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info" installing R info pages ... updating '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir' ... you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' dh_movefiles --sourcedir=debian/r-base-core -pr-doc-pdf dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html gunzip -9v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/*.gz /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info.gz: 67.5% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info.gz: 68.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info.gz: 70.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1.gz: 66.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2.gz: 67.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3.gz: 80.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info.gz: 70.2% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info.gz: 70.4% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info.gz: 68.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info.gz: 72.0% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info dh_movefiles --sourcedir=debian/r-base-core -pr-doc-info rm -vf /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir \ /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir.old removed '/build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir' touch install-indep-stamp dh_installdirs -pr-mathlib usr/include usr/lib \ usr/share/lintian/overrides \ usr/lib/pkgconfig dh_movefiles --sourcedir=debian/r-base-core -pr-mathlib (cd /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/lib; \ ls -l ; \ mv -v libRmath.so libRmath.so.1.0.0; \ ln -sv libRmath.so.1.0.0 libRmath.so.1; \ ln -sv libRmath.so.1 libRmath.so) total 6688 -rw-r--r-- 1 sbuild sbuild 6044748 Jul 9 11:11 libRmath.a -rwxr-xr-x 1 sbuild sbuild 795016 Jul 9 11:11 libRmath.so drwxr-xr-x 2 sbuild sbuild 4096 Jul 9 11:19 pkgconfig renamed 'libRmath.so' -> 'libRmath.so.1.0.0' 'libRmath.so.1' -> 'libRmath.so.1.0.0' 'libRmath.so' -> 'libRmath.so.1' install -m 0644 src/include/Rmath.h \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/include install -m 0644 debian/Rprofile.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R install -m 0644 debian/Renviron.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc; \ mv Makeconf repositories ldpaths ../../../../etc/R/; \ mv Renviron Renviron.ucf; \ ln -s /etc/R/Makeconf .; \ ln -s /etc/R/Renviron .; \ ln -s /etc/R/Renviron.site .; \ ln -s /etc/R/Rprofile.site .; \ ln -s /etc/R/ldpaths .; \ ln -s /etc/R/repositories . ) dh_bash-completion # edd 12 Jan 2016 new location #install -m 0644 debian/R.bash-completion \ # debian/r-base-core/usr/share/bash-completion/completions/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/; \ ln -sv R/lib/libR.so . ) './libR.so' -> 'R/lib/libR.so' (cd debian/icon-class-patch && munpack rlogo_icon.png.mpack) rlogo_icon.png (application/octet-stream) install -m 0644 debian/icon-class-patch/rlogo_icon.png \ debian/r-base-core/usr/share/icons/hicolor/48x48/apps install -m 0644 debian/icon-class-patch/Rlogo.svg \ debian/r-base-core/usr/share/icons/hicolor/scalable/apps/rlogo_icon.svg install -m 0644 debian/icon-class-patch/R.desktop \ debian/r-base-core/usr/share/applications rm debian/icon-class-patch/rlogo_icon.png touch install-arch-stamp *** binary-arch *** dh_testdir -a dh_testroot -a dh_installdocs -pr-base-core doc/NEWS.* README \ debian/README.Atlas \ debian/README.mathlib dh_installdocs -pr-mathlib doc/NEWS.* README \ debian/README.mathlib dh_installexamples -pr-mathlib src/nmath/standalone/test.c (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .) install -p -m 0644 debian/r-base-core.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/lintian/overrides/r-base-core install -p -m 0644 debian/r-recommended.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-recommended/usr/share/lintian/overrides/r-recommended install -p -m 0644 debian/r-mathlib.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib dh_installchangelogs -a -k doc/NEWS dh_strip -a dh_compress -a dh_fixperms -a dh_link -a dh_makeshlibs -a dh_installdeb -a dh_perl -a dh_shlibdeps -a -l /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so' dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 from: /lib/riscv64-linux-gnu/libreadline.so.8 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 to: /lib/riscv64-linux-gnu/libreadline.so.8.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 from: /lib/riscv64-linux-gnu/libtirpc.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 to: /lib/riscv64-linux-gnu/libtirpc.so.3.usr-is-merged dpkg-shlibdeps: warning: can't extract name and version from library name 'libtcl8.6.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libtk8.6.so' *** Getting graphics engine version from 'GraphicsEngine.h' header echo R_GE_version | cpp -I ./src/include/ -include R_ext/GraphicsEngine.h | tail -n1 | sed 's/^/graphicsengine:Version=/' >> debian/r-base-core.substvars dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'r-mathlib' in '../r-mathlib_4.5.0-3_riscv64.deb'. dpkg-deb: building package 'r-base-core' in '../r-base-core_4.5.0-3_riscv64.deb'. dpkg-deb: building package 'r-mathlib-dbgsym' in '../r-mathlib-dbgsym_4.5.0-3_riscv64.deb'. dpkg-deb: building package 'r-base-core-dbgsym' in '../r-base-core-dbgsym_4.5.0-3_riscv64.deb'. dpkg-genbuildinfo --build=any -O../r-base_4.5.0-3_riscv64.buildinfo dpkg-genchanges --build=any -O../r-base_4.5.0-3_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-07-09T11:20:18Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Wed, 09 Jul 2025 11:20:22 +0000 | +------------------------------------------------------------------------------+ r-base_4.5.0-3_riscv64.changes: ------------------------------- Format: 1.8 Date: Tue, 29 Apr 2025 16:56:39 -0500 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: riscv64 Version: 4.5.0-3 Distribution: unstable Urgency: medium Maintainer: Dirk Eddelbuettel Changed-By: Dirk Eddelbuettel Description: r-base-core - GNU R core of statistical computation and graphics system r-mathlib - GNU R standalone mathematics library Changes: r-base (4.5.0-3) unstable; urgency=medium . * debian/control: Update Breaks: for r-base-core to aid the transition of this 4.5.0 release to the upcoming 'trixie' release Checksums-Sha1: 352f29416c32263d041f0e9c1bfc461cff00e6e9 6406892 r-base-core-dbgsym_4.5.0-3_riscv64.deb a12b0ebfbd60a2107068ec8c1542d71473c0bc3e 28658364 r-base-core_4.5.0-3_riscv64.deb 3b0dbacbef883c62966cab9236ed34daa8e086b2 16948 r-base_4.5.0-3_riscv64.buildinfo a8cd8cee86c6e4f9518efcf24acc66d8f6317e63 209304 r-mathlib-dbgsym_4.5.0-3_riscv64.deb 65a0f9ca532a98f8f2e5d85f045d28cc6aadacd5 2874952 r-mathlib_4.5.0-3_riscv64.deb Checksums-Sha256: b44cee7f946631d071ad122ce48288083f793ab02aa482f3536257d5b62046a9 6406892 r-base-core-dbgsym_4.5.0-3_riscv64.deb 01f41d86367e1532ee8e5d7f918d6471cb78e8eba3b97b0afdc0118a461b31d1 28658364 r-base-core_4.5.0-3_riscv64.deb 6aa2e9953c9452f56a61285fdb82394240673b85ce4b1d97415d0f9fcbbfdae3 16948 r-base_4.5.0-3_riscv64.buildinfo be8b8eefcd9f5d0004df91ccb97aae082c30304f1fd55b3e353860d02bebb65e 209304 r-mathlib-dbgsym_4.5.0-3_riscv64.deb 418609cd5d7a49a1560ede0d24b0dc6f39a9b1e2124c7ad4e9c1e60d6aa24ae3 2874952 r-mathlib_4.5.0-3_riscv64.deb Files: 6a97b8c8cae2a2298dc7bec2bb2f9da6 6406892 debug optional r-base-core-dbgsym_4.5.0-3_riscv64.deb 4e6baf8f5f0fe65f8e586f78d9043fc3 28658364 gnu-r optional r-base-core_4.5.0-3_riscv64.deb 114dc9ccf512a48c257fb4e9ae00e9cb 16948 gnu-r optional r-base_4.5.0-3_riscv64.buildinfo 141af3234110a2e1feea582618e82ead 209304 debug optional r-mathlib-dbgsym_4.5.0-3_riscv64.deb 6ee5a773b1a2eaa46d2b9cefa740206b 2874952 gnu-r optional r-mathlib_4.5.0-3_riscv64.deb +------------------------------------------------------------------------------+ | Buildinfo Wed, 09 Jul 2025 11:20:24 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: riscv64 Version: 4.5.0-3 Checksums-Md5: 6a97b8c8cae2a2298dc7bec2bb2f9da6 6406892 r-base-core-dbgsym_4.5.0-3_riscv64.deb 4e6baf8f5f0fe65f8e586f78d9043fc3 28658364 r-base-core_4.5.0-3_riscv64.deb 141af3234110a2e1feea582618e82ead 209304 r-mathlib-dbgsym_4.5.0-3_riscv64.deb 6ee5a773b1a2eaa46d2b9cefa740206b 2874952 r-mathlib_4.5.0-3_riscv64.deb Checksums-Sha1: 352f29416c32263d041f0e9c1bfc461cff00e6e9 6406892 r-base-core-dbgsym_4.5.0-3_riscv64.deb a12b0ebfbd60a2107068ec8c1542d71473c0bc3e 28658364 r-base-core_4.5.0-3_riscv64.deb a8cd8cee86c6e4f9518efcf24acc66d8f6317e63 209304 r-mathlib-dbgsym_4.5.0-3_riscv64.deb 65a0f9ca532a98f8f2e5d85f045d28cc6aadacd5 2874952 r-mathlib_4.5.0-3_riscv64.deb Checksums-Sha256: b44cee7f946631d071ad122ce48288083f793ab02aa482f3536257d5b62046a9 6406892 r-base-core-dbgsym_4.5.0-3_riscv64.deb 01f41d86367e1532ee8e5d7f918d6471cb78e8eba3b97b0afdc0118a461b31d1 28658364 r-base-core_4.5.0-3_riscv64.deb be8b8eefcd9f5d0004df91ccb97aae082c30304f1fd55b3e353860d02bebb65e 209304 r-mathlib-dbgsym_4.5.0-3_riscv64.deb 418609cd5d7a49a1560ede0d24b0dc6f39a9b1e2124c7ad4e9c1e60d6aa24ae3 2874952 r-mathlib_4.5.0-3_riscv64.deb Build-Origin: Debian Build-Architecture: riscv64 Build-Date: Wed, 09 Jul 2025 11:20:13 +0000 Build-Path: /build/reproducible-path/r-base-4.5.0 Installed-Build-Depends: adwaita-icon-theme (= 48.0-1), at-spi2-common (= 2.56.2-1), autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.7), base-passwd (= 3.6.7), bash (= 5.2.37-2), bash-completion (= 1:2.16.0-7), binutils (= 2.44-3), binutils-common (= 2.44-3), binutils-riscv64-linux-gnu (= 2.44-3), bison (= 2:3.8.2+dfsg-1+b2), bsdextrautils (= 2.41-4), bsdutils (= 1:2.41-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), ca-certificates-java (= 20240118), comerr-dev (= 2.1-1.47.2-1+b1), coreutils (= 9.7-2), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-riscv64-linux-gnu (= 14.2.0-19), cpp-riscv64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), dbus (= 1.16.2-2), dbus-bin (= 1.16.2-2), dbus-daemon (= 1.16.2-2), dbus-session-bus-common (= 1.16.2-2), dbus-system-bus-common (= 1.16.2-2), dbus-user-session (= 1.16.2-2), dconf-gsettings-backend (= 0.40.0-5), dconf-service (= 0.40.0-5), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.22), default-jdk (= 2:1.21-76), default-jdk-headless (= 2:1.21-76), default-jre (= 2:1.21-76), default-jre-headless (= 2:1.21-76), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.18), dpkg-dev (= 1.22.18), dwz (= 0.15-1+b3), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.3), fontconfig-config (= 2.15.0-2.3), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-riscv64-linux-gnu (= 14.2.0-19), g++-riscv64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-14-riscv64-linux-gnu (= 14.2.0-19), gcc-riscv64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), gfortran (= 4:14.2.0-1), gfortran-14 (= 14.2.0-19), gfortran-14-riscv64-linux-gnu (= 14.2.0-19), gfortran-riscv64-linux-gnu (= 4:14.2.0-1), gir1.2-freedesktop (= 1.84.0-1), gir1.2-freedesktop-dev (= 1.84.0-1), gir1.2-glib-2.0 (= 2.84.1-2), gir1.2-glib-2.0-dev (= 2.84.1-2), gir1.2-harfbuzz-0.0 (= 10.2.0-1+b1), gir1.2-pango-1.0 (= 1.56.3-1), girepository-tools (= 2.84.1-2), grep (= 3.11-4), groff-base (= 1.23.0-7), gtk-update-icon-cache (= 4.18.4+ds-2), gzip (= 1.13-1), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), icu-devtools (= 76.1-3), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), java-common (= 0.76), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libapache-pom-java (= 33-2), libapparmor1 (= 4.1.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libasound2-data (= 1.2.14-1), libasound2t64 (= 1.2.14-1), libatk-bridge2.0-0t64 (= 2.56.2-1), libatk1.0-0t64 (= 2.56.2-1), libatomic1 (= 14.2.0-19), libatspi2.0-0t64 (= 2.56.2-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b2), libavahi-client3 (= 0.8-16), libavahi-common-data (= 0.8-16), libavahi-common3 (= 0.8-16), libbinutils (= 2.44-3), libblas-dev (= 3.12.1-2), libblas3 (= 3.12.1-2), libblkid-dev (= 2.41-4), libblkid1 (= 2.41-4), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-7), libc-dev-bin (= 2.41-7), libc6 (= 2.41-7), libc6-dev (= 2.41-7), libcairo-gobject2 (= 1.18.4-1+b1), libcairo-script-interpreter2 (= 1.18.4-1+b1), libcairo2 (= 1.18.4-1+b1), libcairo2-dev (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-7), libcc1-0 (= 14.2.0-19), libcloudproviders0 (= 0.3.6-2), libcolord2 (= 1.4.7-3), libcom-err2 (= 1.47.2-1+b1), libcommons-logging-java (= 1.3.0-1), libcommons-parent-java (= 56-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcups2t64 (= 2.4.10-2+b1), libcurl4-openssl-dev (= 8.13.0-5), libcurl4t64 (= 8.13.0-5), libdatrie-dev (= 0.2.13-3+b1), libdatrie1 (= 0.2.13-3+b1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdbus-1-3 (= 1.16.2-2), libdconf1 (= 0.40.0-5), libdebconfclient0 (= 0.278), libdebhelper-perl (= 13.24.2), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdpkg-perl (= 1.22.18), libdrm-amdgpu1 (= 2.4.124-2), libdrm-common (= 2.4.124-2), libdrm2 (= 2.4.124-2), libedit2 (= 3.1-20250104-1), libelf1t64 (= 0.192-4), libepoxy0 (= 1.5.10-2), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.1-1), libexpat1-dev (= 2.7.1-1), libffi-dev (= 3.4.8-2), libffi8 (= 3.4.8-2), libfile-homedir-perl (= 1.006-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfile-which-perl (= 1.27-2), libfontbox-java (= 1:1.8.16-5), libfontconfig-dev (= 2.15.0-2.3), libfontconfig1 (= 2.15.0-2.3), libfontconfig1-dev (= 2.15.0-2.3), libfontenc1 (= 1:1.1.8-1+b2), libfreetype-dev (= 2.13.3+dfsg-1), libfreetype6 (= 2.13.3+dfsg-1), libfribidi-dev (= 1.0.16-1), libfribidi0 (= 1.0.16-1), libgbm1 (= 25.0.4-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-2), libgdk-pixbuf2.0-common (= 2.42.12+dfsg-2), libgfortran-14-dev (= 14.2.0-19), libgfortran5 (= 14.2.0-19), libgif7 (= 5.2.2-1+b1), libgio-2.0-dev (= 2.84.1-2), libgio-2.0-dev-bin (= 2.84.1-2), libgirepository-2.0-0 (= 2.84.1-2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.0.4-1), libglib2.0-0t64 (= 2.84.1-2), libglib2.0-bin (= 2.84.1-2), libglib2.0-data (= 2.84.1-2), libglib2.0-dev (= 2.84.1-2), libglib2.0-dev-bin (= 2.84.1-2), libglvnd0 (= 1.7.0-1+b2), libglx-mesa0 (= 25.0.4-1), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libgraphite2-3 (= 1.3.14-2+b1), libgraphite2-dev (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libgtk-3-0t64 (= 3.24.49-3), libgtk-3-common (= 3.24.49-3), libharfbuzz-cairo0 (= 10.2.0-1+b1), libharfbuzz-dev (= 10.2.0-1+b1), libharfbuzz-gobject0 (= 10.2.0-1+b1), libharfbuzz-icu0 (= 10.2.0-1+b1), libharfbuzz-subset0 (= 10.2.0-1+b1), libharfbuzz0b (= 10.2.0-1+b1), libhogweed6t64 (= 3.10.1-1), libice-dev (= 2:1.1.1-1), libice6 (= 2:1.1.1-1), libicu-dev (= 76.1-3), libicu76 (= 76.1-3), libidn2-0 (= 2.3.8-2), libidn2-dev (= 2.3.8-2), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-3.1), libjpeg62-turbo (= 1:2.1.5-3.1), libjpeg62-turbo-dev (= 1:2.1.5-3.1), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkpathsea6 (= 2024.20240313.70630+ds-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack-dev (= 3.12.1-2), liblapack3 (= 3.12.1-2), liblastlog2-2 (= 2.41-4), liblcms2-2 (= 2.16-2), libldap-dev (= 2.6.9+dfsg-2), libldap2 (= 2.6.9+dfsg-2), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-3), liblsan0 (= 14.2.0-19), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), liblzo2-2 (= 2.10-3+b1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmime-charset-perl (= 1.013.1-2), libmount-dev (= 2.41-4), libmount1 (= 2.41-4), libmpc3 (= 1.3.1-1+b3), libmpfi0 (= 1.5.4+ds-4), libmpfr6 (= 4.2.2-1), libncurses-dev (= 6.5+20250216-2), libncurses6 (= 6.5+20250216-2), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp2-dev (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libnspr4 (= 2:4.36-1), libnss3 (= 2:3.110-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam-systemd (= 257.5-2), libpam0g (= 1.7.0-3), libpango-1.0-0 (= 1.56.3-1), libpango1.0-dev (= 1.56.3-1), libpangocairo-1.0-0 (= 1.56.3-1), libpangoft2-1.0-0 (= 1.56.3-1), libpangoxft-1.0-0 (= 1.56.3-1), libpaper-utils (= 2.2.5-0.3+b2), libpaper2 (= 2.2.5-0.3+b2), libpcre2-16-0 (= 10.45-1), libpcre2-32-0 (= 10.45-1), libpcre2-8-0 (= 10.45-1), libpcre2-dev (= 10.45-1), libpcre2-posix3 (= 10.45-1), libpcsclite1 (= 2.3.3-1), libpdfbox-java (= 1:1.8.16-5), libperl5.40 (= 5.40.1-3), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpixman-1-dev (= 0.44.0-3), libpkgconf3 (= 1.8.1-4), libpng-dev (= 1.6.47-1.1), libpng16-16t64 (= 1.6.47-1.1), libpotrace0 (= 1.16-2+b2), libproc2-0 (= 2:4.0.4-8), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libptexenc1 (= 2024.20240313.70630+ds-6), libpython3-stdlib (= 3.13.3-1), libpython3.13-minimal (= 3.13.3-2), libpython3.13-stdlib (= 3.13.3-2), libreadline-dev (= 8.2-6), libreadline8t64 (= 8.2-6), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libselinux1-dev (= 3.8.1-1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsepol-dev (= 3.8.1-1), libsepol2 (= 3.8.1-1), libsframe1 (= 2.44-3), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm-dev (= 2:1.2.6-1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41-4), libsombok3 (= 2.4.0-2+b2), libsqlite3-0 (= 3.46.1-3), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.0-1), libssl3t64 (= 3.5.0-1), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsynctex2 (= 2024.20240313.70630+ds-6), libsysprof-capture-4-dev (= 48.0-2), libsystemd-shared (= 257.5-2), libsystemd0 (= 257.5-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtcl8.6 (= 8.6.16+dfsg-1), libteckit0 (= 2.5.12+ds1-1+b1), libtexlua53-5 (= 2024.20240313.70630+ds-6), libtext-charwidth-perl (= 0.04-11+b4), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-10), libthai-data (= 0.1.29-2), libthai-dev (= 0.1.29-2+b1), libthai0 (= 0.1.29-2+b1), libtiff-dev (= 4.7.0-3), libtiff6 (= 4.7.0-3), libtiffxx6 (= 4.7.0-3), libtinfo6 (= 6.5+20250216-2), libtirpc-common (= 1.3.6+ds-1), libtirpc-dev (= 1.3.6+ds-1), libtirpc3t64 (= 1.3.6+ds-1), libtk8.6 (= 8.6.16-1), libtool (= 2.5.4-4), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.5-2), libunbound8 (= 1.22.0-1+b1), libunicode-linebreak-perl (= 0.0.20190101-1+b4), libunistring5 (= 1.3-2), libuuid1 (= 2.41-4), libvulkan1 (= 1.4.309.0-1), libwayland-client0 (= 1.23.1-3), libwayland-cursor0 (= 1.23.1-3), libwayland-egl1 (= 1.23.1-3), libwayland-server0 (= 1.23.1-3), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxaw7 (= 2:1.0.16-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render0 (= 1.17.0-2+b1), libxcb-render0-dev (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-shm0-dev (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext-dev (= 2:1.3.4-1+b3), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxfont2 (= 1:2.0.6-1+b3), libxft-dev (= 2.3.6-1+b4), libxft2 (= 2.3.6-1+b4), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon0 (= 1.7.0-2), libxkbfile1 (= 1:1.1.0-1+b4), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-5+b2), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-4), libxml2 (= 2.12.7+dfsg+really2.9.14-0.4), libxmu6 (= 2:1.1.3-3+b4), libxmuu1 (= 2:1.1.3-3+b4), libxpm4 (= 1:3.5.17-1+b3), libxrandr2 (= 2:1.5.4-1+b3), libxrender-dev (= 1:0.9.12-1), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxss-dev (= 1:1.2.3-1+b3), libxss1 (= 1:1.2.3-1+b3), libxt-dev (= 1:1.2.1-1.2+b2), libxt6t64 (= 1:1.2.1-1.2+b2), libxtst6 (= 2:1.2.5-1), libxxf86vm1 (= 1:1.1.4-1+b4), libyaml-tiny-perl (= 1.76-1), libz3-4 (= 4.13.3-1), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.1), linux-libc-dev (= 6.12.25-1), lmodern (= 2.005-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), media-types (= 13.0.0), mesa-libgallium (= 25.0.4-1), mount (= 2.41-4), mpack (= 1.6-18+b2), native-architecture (= 0.2.6), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.1-1), openjdk-21-jdk (= 21.0.7+6-1), openjdk-21-jdk-headless (= 21.0.7+6-1), openjdk-21-jre (= 21.0.7+6-1), openjdk-21-jre-headless (= 21.0.7+6-1), openssl (= 3.5.0-1), openssl-provider-legacy (= 3.5.0-1), pango1.0-tools (= 1.56.3-1), patch (= 2.8-1), perl (= 5.40.1-3), perl-base (= 5.40.1-3), perl-modules-5.40 (= 5.40.1-3), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), preview-latex-style (= 13.2-1), procps (= 2:4.0.4-8), python3 (= 3.13.3-1), python3-minimal (= 3.13.3-1), python3-packaging (= 25.0-1), python3.13 (= 3.13.3-2), python3.13-minimal (= 3.13.3-2), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2), sensible-utils (= 0.0.25), shared-mime-info (= 2.4-5+b2), systemd (= 257.5-2), systemd-sysv (= 257.5-2), sysvinit-utils (= 3.14-4), t1utils (= 1.41-4+b1), tar (= 1.35+dfsg-3.1), tcl8.6 (= 8.6.16+dfsg-1), tcl8.6-dev (= 8.6.16+dfsg-1), tex-common (= 6.19), texinfo (= 7.1.1-1), texinfo-lib (= 7.1.1-1+b1), texlive-base (= 2024.20250309-1), texlive-binaries (= 2024.20240313.70630+ds-6), texlive-extra-utils (= 2024.20250309-2), texlive-fonts-extra (= 2024.20250309-2), texlive-fonts-recommended (= 2024.20250309-1), texlive-latex-base (= 2024.20250309-1), texlive-latex-extra (= 2024.20250309-2), texlive-latex-recommended (= 2024.20250309-1), texlive-luatex (= 2024.20250309-1), texlive-pictures (= 2024.20250309-1), texlive-plain-generic (= 2024.20250309-2), tk8.6 (= 8.6.16-1), tk8.6-dev (= 8.6.16-1), tzdata (= 2025b-2), ucf (= 3.0051), util-linux (= 2.41-4), uuid-dev (= 2.41-4), x11-common (= 1:7.7+24), x11-xkb-utils (= 7.7+9), x11proto-core-dev (= 2024.1-1), x11proto-dev (= 2024.1-1), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xfonts-base (= 1:1.0.5+nmu1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.42-1), xorg-sgml-doctools (= 1:1.11-1.1), xserver-common (= 2:21.1.16-1), xtrans-dev (= 1.4.0-1), xvfb (= 2:21.1.16-1), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1745963799" +------------------------------------------------------------------------------+ | Package contents Wed, 09 Jul 2025 11:20:24 +0000 | +------------------------------------------------------------------------------+ r-base-core-dbgsym_4.5.0-3_riscv64.deb -------------------------------------- new Debian package, version 2.0. size 6406892 bytes: control archive=1372 bytes. 1043 bytes, 12 lines control 1908 bytes, 18 lines md5sums Package: r-base-core-dbgsym Source: r-base Version: 4.5.0-3 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Dirk Eddelbuettel Installed-Size: 6670 Depends: r-base-core (= 4.5.0-3) Section: debug Priority: optional Description: debug 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lines * preinst #!/bin/sh 880 bytes, 29 lines * prerm #!/bin/sh Package: r-base-core Source: r-base Version: 4.5.0-3 Architecture: riscv64 Maintainer: Dirk Eddelbuettel Installed-Size: 45453 Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.41), libcairo2 (>= 1.6.0), libcurl4t64 (>= 7.28.0), libdeflate0 (>= 1.0), libglib2.0-0t64 (>= 2.12.0), libgomp1 (>= 4.9), libicu76 (>= 76.1-1~), libjpeg62-turbo (>= 1.3.1), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.18.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre2-8-0 (>= 10.22), libpng16-16t64 (>= 1.6.46), libreadline8t64 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff6 (>= 4.0.3), libtirpc3t64 (>= 1.0.2), libtk8.6 (>= 8.6.0), libx11-6, libxt6t64, libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates Recommends: r-recommended, r-base-dev, r-doc-html Suggests: elpa-ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html Breaks: r-bioc-bioccheck (<< 1.42.1+dfsg-2~), r-bioc-graph (<< 1.84.1-2~), r-bioc-iranges (<< 2.40.1-3~), r-bioc-pwalign (<< 1.2.0-3~), r-cran-rlang (<< 1.1.5-2~), r-cran-testthat (<< 3.2.3~) Replaces: r-base (<= 1.4.1-1), r-recommended (<< 1.9.0) Provides: r-api-4.0, r-graphics-engine-16 Section: gnu-r Priority: optional Homepage: http://www.r-project.org/ Description: GNU R core of statistical computation and graphics system R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the core GNU R system from which only the optional documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info have been split off to somewhat reduce the size of this package. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/R/ -rw-r--r-- root/root 10400 2025-04-29 21:56 ./etc/R/Makeconf -rw-r--r-- root/root 1983 2025-04-29 21:56 ./etc/R/Renviron.site -rw-r--r-- root/root 988 2025-04-29 21:56 ./etc/R/Rprofile.site -rw-r--r-- root/root 785 2025-04-29 21:56 ./etc/R/ldpaths -rw-r--r-- root/root 1179 2025-04-29 21:56 ./etc/R/repositories drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ld.so.conf.d/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/bin/ -rwxr-xr-x root/root 9061 2025-04-29 21:56 ./usr/bin/R -rwxr-xr-x root/root 10504 2025-04-29 21:56 ./usr/bin/Rscript drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ drwxr-xr-x 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computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the libRmath shared and static libraries which can be called from standalone C or C++ code. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/include/ -rw-r--r-- root/root 20224 2025-04-29 21:56 ./usr/include/Rmath.h drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ -rw-r--r-- root/root 2162132 2025-04-29 21:56 ./usr/lib/libRmath.a lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so -> libRmath.so.1 lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0 -rw-r--r-- root/root 191288 2025-04-29 21:56 ./usr/lib/libRmath.so.1.0.0 drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 173 2025-04-29 21:56 ./usr/lib/pkgconfig/libRmath.pc drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/ -rw-r--r-- root/root 35933 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.0.gz -rw-r--r-- root/root 108741 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.1.gz -rw-r--r-- root/root 96634 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.Rd.gz -rw-r--r-- root/root 229623 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.gz -rw-r--r-- root/root 397731 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.2.rds.gz -rw-r--r-- root/root 122205 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.Rd.gz -rw-r--r-- root/root 113053 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.gz -rw-r--r-- root/root 515218 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.3.rds.gz -rw-r--r-- root/root 88583 2025-04-04 22:15 ./usr/share/doc/r-mathlib/NEWS.Rd.gz lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz -rw-r--r-- root/root 376065 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.pdf.gz -rw-r--r-- root/root 378113 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.rds.gz -rw-r--r-- root/root 2119 2025-04-01 22:15 ./usr/share/doc/r-mathlib/README.gz -rw-r--r-- root/root 3026 2024-04-10 20:08 ./usr/share/doc/r-mathlib/README.mathlib -rw-r--r-- root/root 5238 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.Debian.gz -rw-r--r-- root/root 81260 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.gz -rw-r--r-- root/root 20761 2024-04-10 20:08 ./usr/share/doc/r-mathlib/copyright drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/examples/ -rw-r--r-- root/root 1692 2025-03-13 23:02 ./usr/share/doc/r-mathlib/examples/test.c drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 364 2024-04-10 20:08 ./usr/share/lintian/overrides/r-mathlib +------------------------------------------------------------------------------+ | Post Build Wed, 09 Jul 2025 11:20:34 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Wed, 09 Jul 2025 11:20:34 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Wed, 09 Jul 2025 11:20:57 +0000 | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 540464 Build-Time: 2691 Distribution: unstable Host Architecture: riscv64 Install-Time: 16 Job: /srv/rebuilderd/tmp/rebuilderdAWEdSB/inputs/r-base_4.5.0-3.dsc Machine Architecture: riscv64 Package: r-base Package-Time: 2841 Source-Version: 4.5.0-3 Space: 540464 Status: successful Version: 4.5.0-3 -------------------------------------------------------------------------------- Finished at 2025-07-09T11:20:18Z Build needed 00:47:21, 540464k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdAWEdSB/out checking r-base-core-dbgsym_4.5.0-3_riscv64.deb: size... sha1... md5... sha256... all OK checking r-base-core_4.5.0-3_riscv64.deb: size differs for r-base-core_4.5.0-3_riscv64.deb