=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2+b1_riscv64.buildinfo Source: macs Version: 3.0.2-2 rebuilderd-worker node: riscv64-04 +------------------------------------------------------------------------------+ | Downloading sources Fri, 02 Jan 2026 12:45:46 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.1 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6548 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [117 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [177 kB] Get:15 https://deb.debian.org/debian trixie-proposed-updates/non-free-firmware Sources [692 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [120 kB] Get:17 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2468 B] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7696 B] Get:19 https://deb.debian.org/debian forky/main Sources [10.6 MB] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian sid/non-free-firmware Sources [9692 B] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [3180 B] Get:23 https://deb.debian.org/debian experimental/main Sources [354 kB] Fetched 33.9 MB in 23s (1499 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-2.dsc' macs_3.0.2-2.dsc 2177 SHA256:03cffd4bce72f07489f7a9159a6ea0d85989b010183b81f025c0e0f75559bffb 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2.orig.tar.gz' macs_3.0.2.orig.tar.gz 197484503 SHA256:33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-2.debian.tar.xz' macs_3.0.2-2.debian.tar.xz 1267996 SHA256:ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 macs_3.0.2.orig.tar.gz ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 macs_3.0.2-2.debian.tar.xz 03cffd4bce72f07489f7a9159a6ea0d85989b010183b81f025c0e0f75559bffb macs_3.0.2-2.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Fri, 02 Jan 2026 12:46:51 +0000 | +------------------------------------------------------------------------------+ Rebuilding macs=3.0.2-2 in /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdKQ9wej/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2+b1_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2+b1_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/macs-3.0.2 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20251211T142838Z sid InRelease [176 kB] Get:3 http://snapshot.debian.org/archive/debian/20251215T232102Z sid InRelease [186 kB] Get:4 http://deb.debian.org/debian unstable/main riscv64 Packages [9830 kB] Get:5 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 Packages [9845 kB] Get:6 http://snapshot.debian.org/archive/debian/20251215T232102Z sid/main riscv64 Packages [9832 kB] Fetched 30.1 MB in 19s (1542 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251211T142838Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20251215T232102Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libsystemd0 riscv64 259~rc2-1 [480 kB] Fetched 480 kB in 0s (5700 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6sjs9jv3/libsystemd0_259~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 make riscv64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (5871 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzenge5xk/make_4.4.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-files riscv64 14 [72.9 kB] Fetched 72.9 kB in 0s (1229 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_3kj3pn/base-files_14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc riscv64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (85.8 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_iwd7qz9/gcc_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblocale-gettext-perl riscv64 1.07-7+b1 [15.2 kB] Fetched 15.2 kB in 0s (269 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaxs50zxv/liblocale-gettext-perl_1.07-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gzip riscv64 1.13-1 [139 kB] Fetched 139 kB in 0s (2144 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxkz_h2r4/gzip_1.13-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 cpp-15 riscv64 15.2.0-9 [1272 B] Fetched 1272 B in 0s (23.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyz5tvywp/cpp-15_15.2.0-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libstdc++-15-dev riscv64 15.2.0-9 [6165 kB] Fetched 6165 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzbo_rxk_/libstdc++-15-dev_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 file riscv64 1:5.46-5 [43.4 kB] Fetched 43.4 kB in 0s (728 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmplqhe8ldy/file_5.46-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-minimal riscv64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (486 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyc55lfh2/python3-minimal_3.13.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (218 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8vbyey3h/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1-dev riscv64 2.7.3-1 [334 kB] Fetched 334 kB in 0s (4568 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx4y64nle/libexpat1-dev_2.7.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (150 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7de3dlvc/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-base all 6.5+20251123-1 [277 kB] Fetched 277 kB in 0s (3952 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn9ehmwj6/ncurses-base_6.5+20251123-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libuuid1 riscv64 2.41.2-4 [40.0 kB] Fetched 40.0 kB in 0s (647 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_b2eikot/libuuid1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libacl1 riscv64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (564 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltfll46h/libacl1_2.3.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-2 [372 kB] Fetched 372 kB in 0s (4942 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpst4va5qe/libzstd1_1.5.7+dfsg-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libtsan2 riscv64 15.2.0-9 [2653 kB] Fetched 2653 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkvlgt2h4/libtsan2_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic-mgc riscv64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (4111 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp71p5xrqi/libmagic-mgc_5.46-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-all-dev riscv64 3.13.9-2 [1072 B] Fetched 1072 B in 0s (18.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7rf4gxrd/libpython3-all-dev_3.13.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libc-dev-bin riscv64 2.42-5 [59.1 kB] Fetched 59.1 kB in 0s (1029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplma_dc54/libc-dev-bin_2.42-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (905 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8qjgyf0/python3-packaging_25.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadline8t64 riscv64 8.3-3 [181 kB] Fetched 181 kB in 0s (2742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp67p54dpk/libreadline8t64_8.3-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils riscv64 2.45.50.20251209-1 [285 kB] Fetched 285 kB in 0s (4019 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmui99oh/binutils_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libffi8 riscv64 3.5.2-3 [22.0 kB] Fetched 22.0 kB in 0s (397 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6fd6iu0/libffi8_3.5.2-3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 linux-libc-dev all 6.17.10-1 [2560 kB] Fetched 2560 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfsy4ib21/linux-libc-dev_6.17.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libselinux1 riscv64 3.9-4+b1 [89.1 kB] Fetched 89.1 kB in 0s (1456 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph81v_jfs/libselinux1_3.9-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils-riscv64-linux-gnu riscv64 2.45.50.20251209-1 [900 kB] Fetched 900 kB in 0s (8300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp89r_stei/binutils-riscv64-linux-gnu_2.45.50.20251209-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libsmartcols1 riscv64 2.41.2-4 [155 kB] Fetched 155 kB in 0s (2403 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo846_pcm/libsmartcols1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libunistring5 riscv64 1.3-2 [474 kB] Fetched 474 kB in 0s (5814 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzjyrpain/libunistring5_1.3-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 gcc-15-riscv64-linux-gnu riscv64 15.2.0-9 [28.7 MB] Fetched 28.7 MB in 2s (17.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps2sx7wu0/gcc-15-riscv64-linux-gnu_15.2.0-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libmount1 riscv64 2.41.2-4 [226 kB] Fetched 226 kB in 0s (3274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0tbzjhav/libmount1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils-common riscv64 2.45.50.20251209-1 [2541 kB] Fetched 2541 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3bxs1ol/binutils-common_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (7671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxetdzcdd/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 util-linux riscv64 2.41.2-4 [1158 kB] Fetched 1158 kB in 0s (9644 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw3amth3_/util-linux_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl riscv64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (3889 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0d6524bg/perl_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcrypt1 riscv64 1:4.5.1-1 [114 kB] Fetched 114 kB in 0s (1846 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpe7wgy2s8/libcrypt1_4.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libncursesw6 riscv64 6.5+20251123-1 [141 kB] Fetched 141 kB in 0s (2174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_adk0hbc/libncursesw6_6.5+20251123-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b1 [37.6 kB] Fetched 37.6 kB in 0s (658 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn17q0hyi/libmd0_1.1.0-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 liblzma5 riscv64 5.8.1-2 [312 kB] Fetched 312 kB in 0s (4318 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_n_0pj4/liblzma5_5.8.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (570 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvwznajtx/python3-decorator_5.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 coreutils riscv64 9.7-3 [3036 kB] Fetched 3036 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw29r4q6m/coreutils_9.7-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bash riscv64 5.3-1 [1560 kB] Fetched 1560 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp89j1hgfs/bash_5.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 dh-python all 6.20251204.1 [114 kB] Fetched 114 kB in 0s (1880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjeuvobc5/dh-python_6.20251204.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (221 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyoni4x2_/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext-base riscv64 0.23.2-1 [244 kB] Fetched 244 kB in 0s (3106 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4d96qpdx/gettext-base_0.23.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsimde-dev all 0.8.2-3 [467 kB] Fetched 467 kB in 0s (5857 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdb4e4yic/libsimde-dev_0.8.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (2520 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnymam1cq/ca-certificates_20250419_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libdebconfclient0 riscv64 0.282 [10.7 kB] Fetched 10.7 kB in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpplj_k2wm/libdebconfclient0_0.282_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl riscv64 3.5.4-1 [1474 kB] Fetched 1474 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjmgfsyr3/openssl_3.5.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3 riscv64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpist2ye7r/python3_3.13.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Fetched 836 kB in 0s (8294 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vbqvem_/python3-pygments_2.18.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-bin riscv64 6.5+20251123-1 [443 kB] Fetched 443 kB in 0s (5548 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tozvd7j/ncurses-bin_6.5+20251123-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (223 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqo9dh14v/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-riscv64-linux-gnu riscv64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (25.9 kB/s) dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpenlapmf_/gcc-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-stdlib riscv64 3.13.11-1+b1 [1931 kB] Fetched 1931 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpd5ku0i/libpython3.13-stdlib_3.13.11-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-pluggy all 1.6.0-1 [27.1 kB] Fetched 27.1 kB in 0s (448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwss5th7l/python3-pluggy_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules-bin riscv64 1.7.0-5 [49.3 kB] Fetched 49.3 kB in 0s (861 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxjtj331y/libpam-modules-bin_1.7.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (239 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpryu_299l/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libisl23 riscv64 0.27-1 [664 kB] Fetched 664 kB in 0s (7333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4tmfvn3/libisl23_0.27-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssl3t64 riscv64 3.5.4-1 [2206 kB] Fetched 2206 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdgd46p61/libssl3t64_3.5.4-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Fetched 85.7 kB in 0s (1438 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpzl7ht4o9/zlib1g_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libatomic1 riscv64 15.2.0-9 [8524 B] Fetched 8524 B in 0s (155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqcebtkpd/libatomic1_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (1058 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmv4vlfgj/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debhelper all 13.29 [943 kB] Fetched 943 kB in 0s (8890 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvxjjq2q8/debhelper_13.29_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251215T232102Z sid/main riscv64 tzdata all 2025c-1 [263 kB] Fetched 263 kB in 0s (3830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7x97zwo/tzdata_2025c-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-dev riscv64 3.14.2-1+b1 [17.3 MB] Fetched 17.3 MB in 1s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa92ock3s/libpython3.14-dev_3.14.2-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libc6-dev riscv64 2.42-5 [3167 kB] Fetched 3167 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_b6x2ba/libc6-dev_2.42-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pip all 25.3+dfsg-1 [1384 kB] Fetched 1384 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3koyr8kc/python3-pip_25.3+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libc-bin riscv64 2.42-5 [609 kB] Fetched 609 kB in 0s (6950 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ky8k2c0/libc-bin_2.42-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic1t64 riscv64 1:5.46-5 [117 kB] Fetched 117 kB in 0s (1912 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpxteksqni/libmagic1t64_5.46-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 m4 riscv64 1.4.20-2 [323 kB] Fetched 323 kB in 0s (4365 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp0q1zk2k/m4_1.4.20-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4c0vdtfe/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14 riscv64 3.14.2-1+b1 [828 kB] Fetched 828 kB in 0s (8354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb4kajnzz/python3.14_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all-dev riscv64 3.13.9-2 [1076 B] Fetched 1076 B in 0s (19.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5hyosr2s/python3-all-dev_3.13.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpipeline1 riscv64 1.5.8-2 [40.8 kB] Fetched 40.8 kB in 0s (715 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprvkg_8wk/libpipeline1_1.5.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13 riscv64 3.13.11-1+b1 [770 kB] Fetched 770 kB in 0s (8005 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_zn15_oi/python3.13_3.13.11-1+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libc6 riscv64 2.42-5 [1420 kB] Fetched 1420 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqzz5ny2j/libc6_2.42-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-scipy riscv64 1.16.3-2 [18.5 MB] Fetched 18.5 MB in 1s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpet1vkbzz/python3-scipy_1.16.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext riscv64 0.23.2-1 [1684 kB] Fetched 1684 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn15tizdh/gettext_0.23.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.5.1-1 [262 kB] Fetched 262 kB in 0s (3778 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.5.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp4rcecy6o/libcrypt-dev_4.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproc2-0 riscv64 2:4.0.4-9 [65.9 kB] Fetched 65.9 kB in 0s (1093 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_riscv64.deb' to '/srv/rebuilderd/tmp/tmp5_a615gy/libproc2-0_4.0.4-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libitm1 riscv64 15.2.0-9 [25.4 kB] Fetched 25.4 kB in 0s (444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4i6zv7f/libitm1_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libattr1 riscv64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (416 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp9p1ijxto/libattr1_2.5.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsqlite3-0 riscv64 3.46.1-8 [910 kB] Fetched 910 kB in 0s (8695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv82bep_0/libsqlite3-0_3.46.1-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 man-db riscv64 2.13.1-1 [1458 kB] Fetched 1458 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6dgq95fn/man-db_2.13.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-stdlib riscv64 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (190 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpow7p8y_2/libpython3-stdlib_3.13.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dwz riscv64 0.16-2 [115 kB] Fetched 115 kB in 0s (1906 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppzaknqgt/dwz_0.16-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit1 riscv64 1:4.1.2-1+b1 [58.7 kB] Fetched 58.7 kB in 0s (1015 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmphb_bv0as/libaudit1_4.1.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bzip2 riscv64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (702 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpydz9szyn/bzip2_1.0.8-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp riscv64 4:15.2.0-4 [1572 B] Fetched 1572 B in 0s (28.5 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpeuwfjkzy/cpp_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-base riscv64 5.40.1-7 [1678 kB] Fetched 1678 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhx13lug/perl-base_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-11 [719 kB] Fetched 719 kB in 0s (7678 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3i_kp9ky/libdb5.3t64_5.3.28+dfsg2-11_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-hmmlearn riscv64 0.3.2-2+b3 [148 kB] Fetched 148 kB in 1s (260 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa8opk3ll/python3-hmmlearn_0.3.2-2+b3_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 bsdextrautils riscv64 2.41.2-4 [102 kB] Fetched 102 kB in 0s (1628 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2bm4r2s/bsdextrautils_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dash riscv64 0.5.12-12 [101 kB] Fetched 101 kB in 0s (1685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp30hzocl1/dash_0.5.12-12_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 dpkg riscv64 1.22.21 [1542 kB] Fetched 1542 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxob9vsxt/dpkg_1.22.21_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (1190 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jgnmecj/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB] Fetched 40.3 kB in 0s (711 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc8jg4niw/libbz2-1.0_1.0.8-6_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphm4a291l/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libelf1t64 riscv64 0.194-1 [190 kB] Fetched 190 kB in 0s (2809 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwvsryd1/libelf1t64_0.194-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules riscv64 1.7.0-5 [177 kB] Fetched 177 kB in 0s (2759 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdwoy1dn/libpam-modules_1.7.0-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 cpp-15-riscv64-linux-gnu riscv64 15.2.0-9 [14.7 MB] Fetched 14.7 MB in 1s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefl5xr4f/cpp-15-riscv64-linux-gnu_15.2.0-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-numpy riscv64 1:2.3.5+ds-2+b1 [4237 kB] Fetched 4237 kB in 0s (14.8 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-2+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpb475_1h_/python3-numpy_2.3.5+ds-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (679 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaql103so/init-system-helpers_1.69_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-sklearn all 1.7.2+dfsg-3 [2601 kB] Fetched 2601 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy7jhofxz/python3-sklearn_1.7.2+dfsg-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libcc1-0 riscv64 15.2.0-9 [40.2 kB] Fetched 40.2 kB in 0s (716 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwhuiiwlo/libcc1-0_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsframe2 riscv64 2.45.50.20251209-1 [80.8 kB] Fetched 80.8 kB in 0s (1375 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6fiw1okn/libsframe2_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (3270 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xdz6idf/po-debconf_1.0.22_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libgcc-15-dev riscv64 15.2.0-9 [5657 kB] Fetched 5657 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppto9ele8/libgcc-15-dev_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-wheel all 0.46.1-2 [21.7 kB] Fetched 21.7 kB in 0s (389 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpajphedb9/python3-wheel_0.46.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (7977 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpozez535a/autopoint_0.23.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 g++-15 riscv64 15.2.0-9 [24.6 kB] Fetched 24.6 kB in 0s (418 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfsw1ibp6/g++-15_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 groff-base riscv64 1.23.0-10 [1163 kB] Fetched 1163 kB in 0s (9904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpspbgh8hz/groff-base_1.23.0-10_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libasan8 riscv64 15.2.0-9 [2937 kB] Fetched 2937 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6iy0qelh/libasan8_15.2.0-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libgfortran5 riscv64 15.2.0-9 [420 kB] Fetched 420 kB in 0s (5467 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpabzkq3pu/libgfortran5_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-riscv64-linux-gnu riscv64 4:15.2.0-4 [5284 B] Fetched 5284 B in 0s (94.0 kB/s) dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpxfypvzgu/cpp-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (7160 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpko7j4wex/libdpkg-perl_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 xz-utils riscv64 5.8.1-2 [659 kB] Fetched 659 kB in 0s (7050 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsr42kv0g/xz-utils_5.8.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sed riscv64 4.9-2 [329 kB] Fetched 329 kB in 0s (4556 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpskvh6_os/sed_4.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqhull-r8.0 riscv64 2020.2-7 [248 kB] Fetched 248 kB in 0s (3499 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpionrj2l_/libqhull-r8.0_2020.2-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Fetched 978 kB in 0s (8836 kB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp3z_c5k06/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1 riscv64 2.7.3-1 [106 kB] Fetched 106 kB in 0s (1697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg87zlvsc/libexpat1_2.7.3-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libgomp1 riscv64 15.2.0-9 [131 kB] Fetched 131 kB in 0s (2102 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpugqkcrcn/libgomp1_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-5 [558 kB] Fetched 558 kB in 0s (6512 kB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmrmsun8h/libgmp10_6.3.0+dfsg-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgprofng0 riscv64 2.45.50.20251209-1 [725 kB] Fetched 725 kB in 0s (7579 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_u5ono8/libgprofng0_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Fetched 11.7 kB in 0s (205 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0koya2f8/python3-pyproject-hooks_1.2.0-1_all.deb' Downloading dependency 1 of 218: libsystemd0:riscv64=259~rc2-1 Downloading dependency 2 of 218: make:riscv64=4.4.1-3 Downloading dependency 3 of 218: base-files:riscv64=14 Downloading dependency 4 of 218: gcc:riscv64=4:15.2.0-4 Downloading dependency 5 of 218: liblocale-gettext-perl:riscv64=1.07-7+b1 Downloading dependency 6 of 218: gzip:riscv64=1.13-1 Downloading dependency 7 of 218: cpp-15:riscv64=15.2.0-9 Downloading dependency 8 of 218: libstdc++-15-dev:riscv64=15.2.0-9 Downloading dependency 9 of 218: file:riscv64=1:5.46-5 Downloading dependency 10 of 218: python3-minimal:riscv64=3.13.9-2 Downloading dependency 11 of 218: dh-autoreconf:riscv64=21 Downloading dependency 12 of 218: libexpat1-dev:riscv64=2.7.3-1 Downloading dependency 13 of 218: python3-jaraco.context:riscv64=6.0.1-1 Downloading dependency 14 of 218: ncurses-base:riscv64=6.5+20251123-1 Downloading dependency 15 of 218: libuuid1:riscv64=2.41.2-4 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218: libsframe2:riscv64=2.45.50.20251209-1 Downloading dependency 109 of 218: po-debconf:riscv64=1.0.22 Downloading dependency 110 of 218: libgcc-15-dev:riscv64=15.2.0-9 Downloading dependency 111 of 218: python3-wheel:riscv64=0.46.1-2 Downloading dependency 112 of 218: autopoint:riscv64=0.23.2-1 Downloading dependency 113 of 218: g++-15:riscv64=15.2.0-9 Downloading dependency 114 of 218: groff-base:riscv64=1.23.0-10 Downloading dependency 115 of 218: libasan8:riscv64=15.2.0-9 Downloading dependency 116 of 218: libgfortran5:riscv64=15.2.0-9 Downloading dependency 117 of 218: cpp-riscv64-linux-gnu:riscv64=4:15.2.0-4 Downloading dependency 118 of 218: libdpkg-perl:riscv64=1.22.21 Downloading dependency 119 of 218: xz-utils:riscv64=5.8.1-2 Downloading dependency 120 of 218: sed:riscv64=4.9-2 Downloading dependency 121 of 218: libqhull-r8.0:riscv64=2020.2-7 Downloading dependency 122 of 218: zlib1g-dev:riscv64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 123 of 218: libexpat1:riscv64=2.7.3-1 Downloading dependency 124 of 218: libgomp1:riscv64=15.2.0-9 Downloading dependency 125 of 218: libgmp10:riscv64=2:6.3.0+dfsg-5 Downloading dependency 126 of 218: libgprofng0:riscv64=2.45.50.20251209-1 Downloading dependency 127 of 218: python3-pyproject-hooks:riscv64=1.2.0-1 Downloading dependency 128 of 218: python3-pytest:riscv64=8.4.2-1Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-pytest all 8.4.2-1 [266 kB] Fetched 266 kB in 0s (3786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8z7975qo/python3-pytest_8.4.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (246 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw354l71r/python3-autocommand_2.2.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 grep riscv64 3.12-1 [442 kB] Fetched 442 kB in 0s (5600 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rvw949p/grep_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hostname riscv64 3.25 [10.7 kB] Fetched 10.7 kB in 0s (190 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyl9nap23/hostname_3.25_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libjs-sphinxdoc all 8.2.3-11 [27.8 kB] Fetched 27.8 kB in 0s (498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjj1y6dkb/libjs-sphinxdoc_8.2.3-11_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-cykhash riscv64 2.0.0-3+b4 [674 kB] Fetched 674 kB in 1s (765 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0v16nh2/python3-cykhash_2.0.0-3+b4_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (1530 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5rva5t3s/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (196 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg0ucz4pq/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml2-16 riscv64 2.15.1+dfsg-2+b1 [637 kB] Fetched 637 kB in 0s (6811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5poobq39/libxml2-16_2.15.1+dfsg-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplthcyt8o/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (6004 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp66tn9qs5/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libblkid1 riscv64 2.41.2-4 [193 kB] Fetched 193 kB in 0s (2953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5374v72f/libblkid1_2.41.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcap-ng0 riscv64 0.8.5-4+b2 [17.1 kB] Fetched 17.1 kB in 0s (310 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdjxcjtq/libcap-ng0_0.8.5-4+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.46-1 [301 kB] Fetched 301 kB in 0s (4230 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaej9am6h/libpcre2-8-0_10.46-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bc riscv64 1.07.1-4 [104 kB] Fetched 104 kB in 0s (1727 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdljoyj2j/bc_1.07.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cython3 riscv64 3.1.6+dfsg-2+b1 [3270 kB] Fetched 3270 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsr3yzct6/cython3_3.1.6+dfsg-2+b1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libgcc-s1 riscv64 15.2.0-9 [61.5 kB] Fetched 61.5 kB in 0s (1057 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8chbwnv8/libgcc-s1_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-dev riscv64 3.13.9-2 [26.0 kB] Fetched 26.0 kB in 0s (472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3zkp0srh/python3-dev_3.13.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 gcc-15 riscv64 15.2.0-9 [518 kB] Fetched 518 kB in 0s (6269 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_odtegv/gcc-15_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj0t6bfee/media-types_14.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-sklearn-lib riscv64 1.7.2+dfsg-3+b2 [3946 kB] Fetched 3946 kB in 0s (14.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1604g139/python3-sklearn-lib_1.7.2+dfsg-3+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-stdlib riscv64 3.14.2-1+b1 [2242 kB] Fetched 2242 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptx5avdna/libpython3.14-stdlib_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++ riscv64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (22.9 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmprzfvuj_i/g++_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-minimal riscv64 3.13.11-1+b1 [862 kB] Fetched 862 kB in 0s (8525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfykm09v_/libpython3.13-minimal_3.13.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (157 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxm5bogzn/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpc3 riscv64 1.3.1-2 [56.4 kB] Fetched 56.4 kB in 0s (990 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp21mztedz/libmpc3_1.3.1-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 diffutils riscv64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (5279 kB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpby8wcrap/diffutils_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debianutils riscv64 5.23.2 [91.7 kB] Fetched 91.7 kB in 0s (1542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9u_h6vq3/debianutils_5.23.2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam0g riscv64 1.7.0-5 [70.2 kB] Fetched 70.2 kB in 0s (1181 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0fawqor1/libpam0g_1.7.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14 riscv64 3.14.2-1+b1 [2272 kB] Fetched 2272 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5zrai1ae/libpython3.14_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 findutils riscv64 4.10.0-3 [706 kB] Fetched 706 kB in 0s (7512 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpklv8z719/findutils_4.10.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 help2man riscv64 1.49.3+b1 [198 kB] Fetched 198 kB in 0s (2980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp543h0mk_/help2man_1.49.3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (1749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfy_k35on/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-riscv64-linux-gnu riscv64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (22.2 kB/s) dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a15.2.0-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmp39613wb8/g++-riscv64-linux-gnu_15.2.0-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rpcsvc-proto riscv64 1.4.3-1+b2 [62.3 kB] Fetched 62.3 kB in 0s (1083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvctkhbnt/rpcsvc-proto_1.4.3-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (6463 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmzawwpsm/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (642 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppr559vxr/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpfr6 riscv64 4.2.2-2 [664 kB] Fetched 664 kB in 0s (7339 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dp_m20d/libmpfr6_4.2.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Fetched 18.6 kB in 0s (325 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm_hiv1go/python3-installer_0.7.0+dfsg1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14-dev riscv64 3.14.2-1+b1 [515 kB] Fetched 515 kB in 0s (6062 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcrwgfbdd/python3.14-dev_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sysvinit-utils riscv64 3.15-6 [34.6 kB] Fetched 34.6 kB in 0s (623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfg6m_hrf/sysvinit-utils_3.15-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-passwd riscv64 3.6.8 [54.8 kB] Fetched 54.8 kB in 0s (954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnqu6blhg/base-passwd_3.6.8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm6t64 riscv64 1.26-1 [79.0 kB] Fetched 79.0 kB in 0s (1335 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgdw6acf_/libgdbm6t64_1.26-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libctf-nobfd0 riscv64 2.45.50.20251209-1 [163 kB] Fetched 163 kB in 0s (2539 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp11ph56bv/libctf-nobfd0_2.45.50.20251209-1_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libstdc++6 riscv64 15.2.0-9 [713 kB] Fetched 713 kB in 0s (7592 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7uix32_k/libstdc++6_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Fetched 21.2 kB in 0s (380 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpofhcwc5e/python3-threadpoolctl_3.1.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 pybuild-plugin-pyproject all 6.20251204.1 [12.3 kB] Fetched 12.3 kB in 0s (225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm8hgnc85/pybuild-plugin-pyproject_6.20251204.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-iniconfig all 2.1.0-1 [7432 B] Fetched 7432 B in 0s (132 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpewbtal2j/python3-iniconfig_2.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-joblib all 1.5.2-1 [222 kB] Fetched 222 kB in 0s (3322 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq9lplx9i/python3-joblib_1.5.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 g++-15-riscv64-linux-gnu riscv64 15.2.0-9 [15.8 MB] Fetched 15.8 MB in 1s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1uikntl2/g++-15-riscv64-linux-gnu_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtinfo6 riscv64 6.5+20251123-1 [351 kB] Fetched 351 kB in 0s (4810 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzs8wtm53/libtinfo6_6.5+20251123-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (1969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrurdm9s/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (8574 kB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmp25fsgysz/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-dev riscv64 3.13.11-1+b1 [16.7 MB] Fetched 16.7 MB in 1s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxt0zh0y1/libpython3.13-dev_3.13.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-minimal riscv64 3.13.11-1+b1 [2172 kB] Fetched 2172 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcm4gz99r/python3.13-minimal_3.13.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (3393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp64j6hdf0/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (1240 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxcfpue4n/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (3350 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5jkbrn96/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 liblsan0 riscv64 15.2.0-9 [1326 kB] Fetched 1326 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qttua5h/liblsan0_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-dev riscv64 3.13.9-2 [10.7 kB] Fetched 10.7 kB in 0s (190 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwwz4_hn/libpython3-dev_3.13.9-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 mawk riscv64 1.3.4.20250131-1 [142 kB] Fetched 142 kB in 0s (2268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz0ov74t4/mawk_1.3.4.20250131-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-build all 1.2.2-4 [36.2 kB] Fetched 36.2 kB in 0s (643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp03fz3440/python3-build_1.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp393kfbzx/sensible-utils_0.0.26_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libudev1 riscv64 259~rc2-1 [158 kB] Fetched 158 kB in 0s (2487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_jyj9ps/libudev1_259~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm-compat4t64 riscv64 1.26-1 [52.9 kB] Fetched 52.9 kB in 0s (929 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxi5xtmaq/libgdbm-compat4t64_1.26-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbinutils riscv64 2.45.50.20251209-1 [499 kB] Fetched 499 kB in 0s (6155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2as3del5/libbinutils_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (410 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8p3ah_q/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 patch riscv64 2.8-2 [134 kB] Fetched 134 kB in 0s (2175 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprjx97g14/patch_2.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-dev riscv64 3.13.11-1+b1 [511 kB] Fetched 511 kB in 0s (6199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp328fxm1h/python3.13-dev_3.13.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-minimal riscv64 3.14.2-1+b1 [892 kB] Fetched 892 kB in 0s (8605 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvzqmavz1/libpython3.14-minimal_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 build-essential riscv64 12.12 [4628 B] Fetched 4628 B in 0s (83.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9ss_tgw/build-essential_12.12_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libc-gconv-modules-extra riscv64 2.42-5 [1132 kB] Fetched 1132 kB in 0s (9457 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfftzlaww/libc-gconv-modules-extra_2.42-5_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libcap2 riscv64 1:2.75-10+b2 [29.2 kB] Fetched 29.2 kB in 0s (511 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b2_riscv64.deb' to '/srv/rebuilderd/tmp/tmpjltp1h20/libcap2_2.75-10+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all riscv64 3.13.9-2 [1052 B] Fetched 1052 B in 0s (18.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp74je4usg/python3-all_3.13.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperl5.40 riscv64 5.40.1-7 [3952 kB] Fetched 3952 kB in 0s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplhh4ik55/libperl5.40_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (583 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdl6_r26v/python3-inflect_7.5.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libubsan1 riscv64 15.2.0-9 [1177 kB] Fetched 1177 kB in 0s (9798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq5ma1ayy/libubsan1_15.2.0-9_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 gcc-15-base riscv64 15.2.0-9 [53.7 kB] Fetched 53.7 kB in 0s (910 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq04sxz_w/gcc-15-base_15.2.0-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuchardet0 riscv64 0.0.8-2 [68.3 kB] Fetched 68.3 kB in 0s (1145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6becoyp8/libuchardet0_0.0.8-2_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 python3-numpy-dev riscv64 1:2.3.5+ds-2+b1 [185 kB] Fetched 185 kB in 0s (2865 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-2+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpvdg_y99i/python3-numpy-dev_2.3.5+ds-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl-provider-legacy riscv64 3.5.4-1 [310 kB] Fetched 310 kB in 0s (4242 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq14kxoah/openssl-provider-legacy_3.5.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tar riscv64 1.35+dfsg-3.1 [822 kB] Fetched 822 kB in 0s (8241 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_sn_oq3p/tar_1.35+dfsg-3.1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13 riscv64 3.13.11-1+b1 [2174 kB] Fetched 2174 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplwx1c57v/libpython3.13_3.13.11-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14-minimal riscv64 3.14.2-1+b1 [2270 kB] Fetched 2270 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7tcnk6qw/python3.14-minimal_3.14.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblapack3 riscv64 3.12.1-7 [1971 kB] Fetched 1971 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqhkxy07b/liblapack3_3.12.1-7_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251211T142838Z sid/main riscv64 libjansson4 riscv64 2.14-2+b3 [40.7 kB] Fetched 40.7 kB in 0s (716 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd_4lxs52/libjansson4_2.14-2+b3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libctf0 riscv64 2.45.50.20251209-1 [96.2 kB] Fetched 96.2 kB in 0s (1620 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpka649pf5/libctf0_2.45.50.20251209-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (208 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcs3pjsqb/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 procps riscv64 2:4.0.4-9 [880 kB] Fetched 880 kB in 0s (8528 kB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_riscv64.deb' to '/srv/rebuilderd/tmp/tmp6cq1_xju/procps_4.0.4-9_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdebhelper-perl all 13.29 [92.6 kB] Fetched 92.6 kB in 0s (1555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo8s8alf8/libdebhelper-perl_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblas3 riscv64 3.12.1-7 [123 kB] Fetched 123 kB in 0s (2022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4_4tq3qv/libblas3_3.12.1-7_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture riscv64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpoe1d2aho/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm 127.0.0.1 - - [02/Jan/2026 20:57:25] code 404, message File not found 127.0.0.1 - - [02/Jan/2026 20:57:25] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38925 ./ InRelease 127.0.0.1 - - [02/Jan/2026 20:57:25] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:38925 ./ Release [462 B] 127.0.0.1 - - [02/Jan/2026 20:57:25] code 404, message File not found 127.0.0.1 - - [02/Jan/2026 20:57:25] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38925 ./ Release.gpg 127.0.0.1 - - [02/Jan/2026 20:57:25] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:38925 ./ Packages [267 kB] Fetched 267 kB in 0s (2012 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./gcc-15-base_15.2.0-9_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libc-gconv-modules-extra_2.42-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libc6_2.42-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libgcc-s1_15.2.0-9_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./mawk_1.3.4.20250131-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./base-files_14_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libtinfo6_6.5%2b20251123-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./debianutils_5.23.2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./bash_5.3-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libacl1_2.3.2-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libattr1_2.5.2-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libcap2_2.75-10%2bb2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libgmp10_6.3.0%2bdfsg-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libpcre2-8-0_10.46-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libselinux1_3.9-4%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libzstd1_1.5.7%2bdfsg-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:26] "GET /./libssl3t64_3.5.4-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./openssl-provider-legacy_3.5.4-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./libsystemd0_259%7erc2-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./coreutils_9.7-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./dash_0.5.12-12_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./diffutils_3.12-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./libbz2-1.0_1.0.8-6_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./liblzma5_5.8.1-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./libmd0_1.1.0-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./tar_1.35%2bdfsg-3.1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./dpkg_1.22.21_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./findutils_4.10.0-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./grep_3.12-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./gzip_1.13-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./hostname_3.25_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./ncurses-bin_6.5%2b20251123-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./libcrypt1_4.5.1-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:27] "GET /./perl-base_5.40.1-7_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./sed_4.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libcap-ng0_0.8.5-4%2bb2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libaudit1_4.1.2-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libdb5.3t64_5.3.28%2bdfsg2-11_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libpam0g_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libpam-modules-bin_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libpam-modules_1.7.0-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libblkid1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libmount1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libsmartcols1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libudev1_259%7erc2-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libuuid1_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./util-linux_2.41.2-4_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libdebconfclient0_0.282_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./base-passwd_3.6.8_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./libc-bin_2.42-5_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./ncurses-base_6.5%2b20251123-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:28] "GET /./sysvinit-utils_3.15-6_riscv64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm 127.0.0.1 - - [02/Jan/2026 20:57:36] code 404, message File not found 127.0.0.1 - - [02/Jan/2026 20:57:36] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38925 ./ InRelease 127.0.0.1 - - [02/Jan/2026 20:57:36] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:38925 ./ Release 127.0.0.1 - - [02/Jan/2026 20:57:36] code 404, message File not found 127.0.0.1 - - [02/Jan/2026 20:57:36] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38925 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [02/Jan/2026 20:57:58] "GET /./liblocale-gettext-perl_1.07-7%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:58] "GET /./libexpat1_2.7.3-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:58] "GET /./libpython3.13-minimal_3.13.11-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:58] "GET /./python3.13-minimal_3.13.11-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./python3-minimal_3.13.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./tzdata_2025c-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libffi8_3.5.2-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libncursesw6_6.5%2b20251123-1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./readline-common_8.3-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libreadline8t64_8.3-3_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libsqlite3-0_3.46.1-8_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libpython3.13-stdlib_3.13.11-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./python3.13_3.13.11-1%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libpython3-stdlib_3.13.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./python3_3.13.9-2_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./python3-numpy-dev_2.3.5%2bds-2%2bb1_riscv64.deb HTTP/1.1" 200 - 127.0.0.1 - - [02/Jan/2026 20:57:59] "GET /./libblas3_3.12.1-7_riscv64.deb HTTP/1.1" 200 - 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Building dependency tree... Reading state information... libsystemd0 is already the newest version (259~rc2-1). make is already the newest version (4.4.1-3). make set to manually installed. base-files is already the newest version (14). gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. liblocale-gettext-perl is already the newest version (1.07-7+b1). liblocale-gettext-perl set to manually installed. gzip is already the newest version (1.13-1). cpp-15 is already the newest version (15.2.0-9). cpp-15 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-9). libstdc++-15-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. ncurses-base is already the newest version (6.5+20251123-1). libuuid1 is already the newest version (2.41.2-4). libacl1 is already the newest version (2.3.2-2+b1). libzstd1 is already the newest version (1.5.7+dfsg-2). libtsan2 is already the newest version (15.2.0-9). libtsan2 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libpython3-all-dev is already the newest version (3.13.9-2). libpython3-all-dev set to manually installed. libc-dev-bin is already the newest version (2.42-5). libc-dev-bin set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. binutils is already the newest version (2.45.50.20251209-1). binutils set to manually installed. libffi8 is already the newest version (3.5.2-3). libffi8 set to manually installed. linux-libc-dev is already the newest version (6.17.10-1). linux-libc-dev set to manually installed. libselinux1 is already the newest version (3.9-4+b1). binutils-riscv64-linux-gnu is already the newest version (2.45.50.20251209-1). binutils-riscv64-linux-gnu set to manually installed. libsmartcols1 is already the newest version (2.41.2-4). libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. gcc-15-riscv64-linux-gnu is already the newest version (15.2.0-9). gcc-15-riscv64-linux-gnu set to manually installed. libmount1 is already the newest version (2.41.2-4). binutils-common is already the newest version (2.45.50.20251209-1). binutils-common set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. util-linux is already the newest version (2.41.2-4). perl is already the newest version (5.40.1-7). perl set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libncursesw6 is already the newest version (6.5+20251123-1). libncursesw6 set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). liblzma5 is already the newest version (5.8.1-2). python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. coreutils is already the newest version (9.7-3). bash is already the newest version (5.3-1). dh-python is already the newest version (6.20251204.1). dh-python set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. libsimde-dev is already the newest version (0.8.2-3). libsimde-dev set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libdebconfclient0 is already the newest version (0.282). openssl is already the newest version (3.5.4-1). openssl set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. python3-pygments is already the newest version (2.18.0+dfsg-2). python3-pygments set to manually installed. ncurses-bin is already the newest version (6.5+20251123-1). netbase is already the newest version (6.5). netbase set to manually installed. gcc-riscv64-linux-gnu is already the newest version (4:15.2.0-4). gcc-riscv64-linux-gnu set to manually installed. libpython3.13-stdlib is already the newest version (3.13.11-1+b1). libpython3.13-stdlib set to manually installed. python3-pluggy is already the newest version (1.6.0-1). python3-pluggy set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libaudit-common is already the newest version (1:4.1.2-1). libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libssl3t64 is already the newest version (3.5.4-1). zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libatomic1 is already the newest version (15.2.0-9). libatomic1 set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. debhelper is already the newest version (13.29). debhelper set to manually installed. tzdata is already the newest version (2025c-1). tzdata set to manually installed. libpython3.14-dev is already the newest version (3.14.2-1+b1). libpython3.14-dev set to manually installed. libc6-dev is already the newest version (2.42-5). libc6-dev set to manually installed. python3-pip is already the newest version (25.3+dfsg-1). python3-pip set to manually installed. libc-bin is already the newest version (2.42-5). libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. python3.14 is already the newest version (3.14.2-1+b1). python3.14 set to manually installed. python3-all-dev is already the newest version (3.13.9-2). python3-all-dev set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. python3.13 is already the newest version (3.13.11-1+b1). python3.13 set to manually installed. libc6 is already the newest version (2.42-5). python3-scipy is already the newest version (1.16.3-2). python3-scipy set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. libcrypt-dev is already the newest version (1:4.5.1-1). libcrypt-dev set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. libitm1 is already the newest version (15.2.0-9). libitm1 set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. perl-base is already the newest version (5.40.1-7). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). python3-hmmlearn is already the newest version (0.3.2-2+b3). python3-hmmlearn set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. dash is already the newest version (0.5.12-12). dpkg is already the newest version (1.22.21). python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libpam-modules is already the newest version (1.7.0-5). cpp-15-riscv64-linux-gnu is already the newest version (15.2.0-9). cpp-15-riscv64-linux-gnu set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-2+b1). python3-numpy set to manually installed. init-system-helpers is already the newest version (1.69). python3-sklearn is already the newest version (1.7.2+dfsg-3). python3-sklearn set to manually installed. libcc1-0 is already the newest version (15.2.0-9). libcc1-0 set to manually installed. libsframe2 is already the newest version (2.45.50.20251209-1). libsframe2 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libgcc-15-dev is already the newest version (15.2.0-9). libgcc-15-dev set to manually installed. python3-wheel is already the newest version (0.46.1-2). python3-wheel set to manually installed. autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. g++-15 is already the newest version (15.2.0-9). g++-15 set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libasan8 is already the newest version (15.2.0-9). libasan8 set to manually installed. libgfortran5 is already the newest version (15.2.0-9). libgfortran5 set to manually installed. cpp-riscv64-linux-gnu is already the newest version (4:15.2.0-4). cpp-riscv64-linux-gnu set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. sed is already the newest version (4.9-2). libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libgomp1 is already the newest version (15.2.0-9). libgomp1 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libgprofng0 is already the newest version (2.45.50.20251209-1). libgprofng0 set to manually installed. python3-pyproject-hooks is already the newest version (1.2.0-1). python3-pyproject-hooks set to manually installed. python3-pytest is already the newest version (8.4.2-1). python3-pytest set to manually installed. python3-autocommand is already the newest version (2.2.2-3). python3-autocommand set to manually installed. grep is already the newest version (3.12-1). hostname is already the newest version (3.25). libjs-sphinxdoc is already the newest version (8.2.3-11). libjs-sphinxdoc set to manually installed. python3-cykhash is already the newest version (2.0.0-3+b4). python3-cykhash set to manually installed. python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libblkid1 is already the newest version (2.41.2-4). libcap-ng0 is already the newest version (0.8.5-4+b2). libpcre2-8-0 is already the newest version (10.46-1). bc is already the newest version (1.07.1-4). bc set to manually installed. cython3 is already the newest version (3.1.6+dfsg-2+b1). cython3 set to manually installed. libgcc-s1 is already the newest version (15.2.0-9). python3-dev is already the newest version (3.13.9-2). python3-dev set to manually installed. gcc-15 is already the newest version (15.2.0-9). gcc-15 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3-sklearn-lib is already the newest version (1.7.2+dfsg-3+b2). python3-sklearn-lib set to manually installed. libpython3.14-stdlib is already the newest version (3.14.2-1+b1). libpython3.14-stdlib set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libpython3.13-minimal is already the newest version (3.13.11-1+b1). libpython3.13-minimal set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. diffutils is already the newest version (1:3.12-1). debianutils is already the newest version (5.23.2). libpam0g is already the newest version (1.7.0-5). libpython3.14 is already the newest version (3.14.2-1+b1). libpython3.14 set to manually installed. findutils is already the newest version (4.10.0-3). help2man is already the newest version (1.49.3+b1). help2man set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:15.2.0-4). g++-riscv64-linux-gnu set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. python3-installer is already the newest version (0.7.0+dfsg1-3). python3-installer set to manually installed. python3.14-dev is already the newest version (3.14.2-1+b1). python3.14-dev set to manually installed. sysvinit-utils is already the newest version (3.15-6). base-passwd is already the newest version (3.6.8). libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libctf-nobfd0 is already the newest version (2.45.50.20251209-1). libctf-nobfd0 set to manually installed. libstdc++6 is already the newest version (15.2.0-9). libstdc++6 set to manually installed. python3-threadpoolctl is already the newest version (3.1.0-1). python3-threadpoolctl set to manually installed. pybuild-plugin-pyproject is already the newest version (6.20251204.1). pybuild-plugin-pyproject set to manually installed. python3-iniconfig is already the newest version (2.1.0-1). python3-iniconfig set to manually installed. python3-joblib is already the newest version (1.5.2-1). python3-joblib set to manually installed. g++-15-riscv64-linux-gnu is already the newest version (15.2.0-9). g++-15-riscv64-linux-gnu set to manually installed. libtinfo6 is already the newest version (6.5+20251123-1). debconf is already the newest version (1.5.91). automake is already the newest version (1:1.18.1-3). automake set to manually installed. libpython3.13-dev is already the newest version (3.13.11-1+b1). libpython3.13-dev set to manually installed. python3.13-minimal is already the newest version (3.13.11-1+b1). python3.13-minimal set to manually installed. libpam-runtime is already the newest version (1.7.0-5). readline-common is already the newest version (8.3-3). readline-common set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. liblsan0 is already the newest version (15.2.0-9). liblsan0 set to manually installed. libpython3-dev is already the newest version (3.13.9-2). libpython3-dev set to manually installed. mawk is already the newest version (1.3.4.20250131-1). python3-build is already the newest version (1.2.2-4). python3-build set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libudev1 is already the newest version (259~rc2-1). libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. libbinutils is already the newest version (2.45.50.20251209-1). libbinutils set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. python3.13-dev is already the newest version (3.13.11-1+b1). python3.13-dev set to manually installed. libpython3.14-minimal is already the newest version (3.14.2-1+b1). libpython3.14-minimal set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-5). libcap2 is already the newest version (1:2.75-10+b2). python3-all is already the newest version (3.13.9-2). python3-all set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. libubsan1 is already the newest version (15.2.0-9). libubsan1 set to manually installed. gcc-15-base is already the newest version (15.2.0-9). libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-2+b1). python3-numpy-dev set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). tar is already the newest version (1.35+dfsg-3.1). libpython3.13 is already the newest version (3.13.11-1+b1). libpython3.13 set to manually installed. python3.14-minimal is already the newest version (3.14.2-1+b1). python3.14-minimal set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libctf0 is already the newest version (2.45.50.20251209-1). libctf0 set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. libdebhelper-perl is already the newest version (13.29). libdebhelper-perl set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm (Reading database ... 24411 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.hXf8gN5AWm... I: success in 608.9886 seconds Downloading dependency 129 of 218: python3-autocommand:riscv64=2.2.2-3 Downloading dependency 130 of 218: grep:riscv64=3.12-1 Downloading dependency 131 of 218: hostname:riscv64=3.25 Downloading dependency 132 of 218: libjs-sphinxdoc:riscv64=8.2.3-11 Downloading dependency 133 of 218: python3-cykhash:riscv64=2.0.0-3+b4 Downloading dependency 134 of 218: python3-typing-extensions:riscv64=4.15.0-1 Downloading dependency 135 of 218: python3-zipp:riscv64=3.23.0-1 Downloading dependency 136 of 218: libxml2-16:riscv64=2.15.1+dfsg-2+b1 Downloading dependency 137 of 218: perl-modules-5.40:riscv64=5.40.1-7 Downloading dependency 138 of 218: autoconf:riscv64=2.72-3.1 Downloading dependency 139 of 218: libblkid1:riscv64=2.41.2-4 Downloading dependency 140 of 218: libcap-ng0:riscv64=0.8.5-4+b2 Downloading dependency 141 of 218: libpcre2-8-0:riscv64=10.46-1 Downloading dependency 142 of 218: bc:riscv64=1.07.1-4 Downloading dependency 143 of 218: 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python3-threadpoolctl:riscv64=3.1.0-1 Downloading dependency 174 of 218: pybuild-plugin-pyproject:riscv64=6.20251204.1 Downloading dependency 175 of 218: python3-iniconfig:riscv64=2.1.0-1 Downloading dependency 176 of 218: python3-joblib:riscv64=1.5.2-1 Downloading dependency 177 of 218: g++-15-riscv64-linux-gnu:riscv64=15.2.0-9 Downloading dependency 178 of 218: libtinfo6:riscv64=6.5+20251123-1 Downloading dependency 179 of 218: debconf:riscv64=1.5.91 Downloading dependency 180 of 218: automake:riscv64=1:1.18.1-3 Downloading dependency 181 of 218: libpython3.13-dev:riscv64=3.13.11-1+b1 Downloading dependency 182 of 218: python3.13-minimal:riscv64=3.13.11-1+b1 Downloading dependency 183 of 218: libpam-runtime:riscv64=1.7.0-5 Downloading dependency 184 of 218: readline-common:riscv64=8.3-3 Downloading dependency 185 of 218: python3-pkg-resources:riscv64=78.1.1-0.1 Downloading dependency 186 of 218: liblsan0:riscv64=15.2.0-9 Downloading dependency 187 of 218: libpython3-dev:riscv64=3.13.9-2 Downloading dependency 188 of 218: mawk:riscv64=1.3.4.20250131-1 Downloading dependency 189 of 218: python3-build:riscv64=1.2.2-4 Downloading dependency 190 of 218: sensible-utils:riscv64=0.0.26 Downloading dependency 191 of 218: libudev1:riscv64=259~rc2-1 Downloading dependency 192 of 218: libgdbm-compat4t64:riscv64=1.26-1 Downloading dependency 193 of 218: libbinutils:riscv64=2.45.50.20251209-1 Downloading dependency 194 of 218: intltool-debian:riscv64=0.35.0+20060710.6 Downloading dependency 195 of 218: patch:riscv64=2.8-2 Downloading dependency 196 of 218: python3.13-dev:riscv64=3.13.11-1+b1 Downloading dependency 197 of 218: libpython3.14-minimal:riscv64=3.14.2-1+b1 Downloading dependency 198 of 218: build-essential:riscv64=12.12 Downloading dependency 199 of 218: libc-gconv-modules-extra:riscv64=2.42-5 Downloading dependency 200 of 218: libcap2:riscv64=1:2.75-10+b2 Downloading dependency 201 of 218: python3-all:riscv64=3.13.9-2 Downloading dependency 202 of 218: libperl5.40:riscv64=5.40.1-7 Downloading dependency 203 of 218: python3-inflect:riscv64=7.5.0-1 Downloading dependency 204 of 218: libubsan1:riscv64=15.2.0-9 Downloading dependency 205 of 218: gcc-15-base:riscv64=15.2.0-9 Downloading dependency 206 of 218: libuchardet0:riscv64=0.0.8-2 Downloading dependency 207 of 218: python3-numpy-dev:riscv64=1:2.3.5+ds-2+b1 Downloading dependency 208 of 218: openssl-provider-legacy:riscv64=3.5.4-1 Downloading dependency 209 of 218: tar:riscv64=1.35+dfsg-3.1 Downloading dependency 210 of 218: libpython3.13:riscv64=3.13.11-1+b1 Downloading dependency 211 of 218: python3.14-minimal:riscv64=3.14.2-1+b1 Downloading dependency 212 of 218: liblapack3:riscv64=3.12.1-7 Downloading dependency 213 of 218: libjansson4:riscv64=2.14-2+b3 Downloading dependency 214 of 218: libctf0:riscv64=2.45.50.20251209-1 Downloading dependency 215 of 218: python3-jaraco.text:riscv64=4.0.0-1 Downloading dependency 216 of 218: procps:riscv64=2:4.0.4-9 Downloading dependency 217 of 218: libdebhelper-perl:riscv64=13.29 Downloading dependency 218 of 218: libblas3:riscv64=3.12.1-7 env --chdir=/srv/rebuilderd/tmp/rebuilderdKQ9wej/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1765735894 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildRo1uhO/debrebuild.sbuildrc.snc4Cs4aHv4a sbuild --build=riscv64 --host=riscv64 --no-source --arch-any --no-arch-all --binNMU-changelog= macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for riscv64; no source changes. * Rebuild with Python 3.14 as supported -- riscv64 Build Daemon (rv-osuosl-05) Sun, 14 Dec 2025 18:11:34 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildRo1uhO/debrebuild.tar.6HBVG2o_veCV --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=macs-3.0.2 /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on localhost +==============================================================================+ | macs 3.0.2-2+b1 (riscv64) Fri, 02 Jan 2026 13:07:36 +0000 | +==============================================================================+ Package: macs Version: 3.0.2-2+b1 Source Version: 3.0.2-2 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildRo1uhO/debrebuild.tar.6HBVG2o_veCV to /srv/rebuilderd/tmp/tmp.sbuild.MksU1MHfnp... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Fri, 02 Jan 2026 13:08:31 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2.dsc exists in /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Fri, 02 Jan 2026 13:08:43 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-cKS1v8/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Fri, 02 Jan 2026 13:09:09 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any) +------------------------------------------------------------------------------+ | Build environment Fri, 02 Jan 2026 13:09:12 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-riscv64 #1 SMP Debian 6.12.57-1 (2025-11-05) riscv64 (riscv64) Toolchain package versions: binutils_2.45.50.20251209-1 dpkg-dev_1.22.21 g++-15_15.2.0-9 gcc-15_15.2.0-9 libc6-dev_2.42-5 libstdc++-15-dev_15.2.0-9 libstdc++6_15.2.0-9 linux-libc-dev_6.17.10-1 Package versions: autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 bc_1.07.1-4 binutils_2.45.50.20251209-1 binutils-common_2.45.50.20251209-1 binutils-riscv64-linux-gnu_2.45.50.20251209-1 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-9 cpp-15-riscv64-linux-gnu_15.2.0-9 cpp-riscv64-linux-gnu_4:15.2.0-4 cython3_3.1.6+dfsg-2+b1 dash_0.5.12-12 debconf_1.5.91 debhelper_13.29 debianutils_5.23.2 dh-autoreconf_21 dh-python_6.20251204.1 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-9 g++-15-riscv64-linux-gnu_15.2.0-9 g++-riscv64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-9 gcc-15-base_15.2.0-9 gcc-15-riscv64-linux-gnu_15.2.0-9 gcc-riscv64-linux-gnu_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 help2man_1.49.3+b1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-9 libatomic1_15.2.0-9 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.45.50.20251209-1 libblas3_3.12.1-7 libblkid1_2.41.2-4 libbz2-1.0_1.0.8-6 libc-bin_2.42-5 libc-dev-bin_2.42-5 libc-gconv-modules-extra_2.42-5 libc6_2.42-5 libc6-dev_2.42-5 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b2 libcc1-0_15.2.0-9 libcrypt-dev_1:4.5.1-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.45.50.20251209-1 libctf0_2.45.50.20251209-1 libdb5.3t64_5.3.28+dfsg2-11 libdebconfclient0_0.282 libdebhelper-perl_13.29 libdpkg-perl_1.22.21 libelf1t64_0.194-1 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libffi8_3.5.2-3 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-9 libgcc-s1_15.2.0-9 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-9 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-9 libgprofng0_2.45.50.20251209-1 libisl23_0.27-1 libitm1_15.2.0-9 libjansson4_2.14-2+b3 libjs-sphinxdoc_8.2.3-11 liblapack3_3.12.1-7 liblocale-gettext-perl_1.07-7+b1 liblsan0_15.2.0-9 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20251123-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libproc2-0_2:4.0.4-9 libpython3-all-dev_3.13.9-2 libpython3-dev_3.13.9-2 libpython3-stdlib_3.13.9-2 libpython3.13_3.13.11-1+b1 libpython3.13-dev_3.13.11-1+b1 libpython3.13-minimal_3.13.11-1+b1 libpython3.13-stdlib_3.13.11-1+b1 libpython3.14_3.14.2-1+b1 libpython3.14-dev_3.14.2-1+b1 libpython3.14-minimal_3.14.2-1+b1 libpython3.14-stdlib_3.14.2-1+b1 libqhull-r8.0_2020.2-7 libreadline8t64_8.3-3 libselinux1_3.9-4+b1 libsframe2_2.45.50.20251209-1 libsimde-dev_0.8.2-3 libsmartcols1_2.41.2-4 libsqlite3-0_3.46.1-8 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-9 libstdc++6_15.2.0-9 libsystemd0_259~rc2-1 libtinfo6_6.5+20251123-1 libtool_2.5.4-9 libtsan2_15.2.0-9 libubsan1_15.2.0-9 libuchardet0_0.0.8-2 libudev1_259~rc2-1 libunistring5_1.3-2 libuuid1_2.41.2-4 libxml2-16_2.15.1+dfsg-2+b1 libzstd1_1.5.7+dfsg-2 linux-libc-dev_6.17.10-1 m4_1.4.20-2 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20250131-1 media-types_14.0.0 ncurses-base_6.5+20251123-1 ncurses-bin_6.5+20251123-1 netbase_6.5 openssl_3.5.4-1 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 procps_2:4.0.4-9 pybuild-plugin-pyproject_6.20251204.1 python3_3.13.9-2 python3-all_3.13.9-2 python3-all-dev_3.13.9-2 python3-autocommand_2.2.2-3 python3-build_1.2.2-4 python3-cykhash_2.0.0-3+b4 python3-decorator_5.2.1-2 python3-dev_3.13.9-2 python3-hmmlearn_0.3.2-2+b3 python3-inflect_7.5.0-1 python3-iniconfig_2.1.0-1 python3-installer_0.7.0+dfsg1-3 python3-jaraco.context_6.0.1-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-joblib_1.5.2-1 python3-minimal_3.13.9-2 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-2+b1 python3-numpy-dev_1:2.3.5+ds-2+b1 python3-packaging_25.0-1 python3-pip_25.3+dfsg-1 python3-pkg-resources_78.1.1-0.1 python3-pluggy_1.6.0-1 python3-pygments_2.18.0+dfsg-2 python3-pyproject-hooks_1.2.0-1 python3-pytest_8.4.2-1 python3-scipy_1.16.3-2 python3-setuptools_78.1.1-0.1 python3-sklearn_1.7.2+dfsg-3 python3-sklearn-lib_1.7.2+dfsg-3+b2 python3-threadpoolctl_3.1.0-1 python3-typeguard_4.4.4-1 python3-typing-extensions_4.15.0-1 python3-wheel_0.46.1-2 python3-zipp_3.23.0-1 python3.13_3.13.11-1+b1 python3.13-dev_3.13.11-1+b1 python3.13-minimal_3.13.11-1+b1 python3.14_3.14.2-1+b1 python3.14-dev_3.14.2-1+b1 python3.14-minimal_3.14.2-1+b1 readline-common_8.3-3 rpcsvc-proto_1.4.3-1+b2 sed_4.9-2 sensible-utils_0.0.26 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tzdata_2025c-1 util-linux_2.41.2-4 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Fri, 02 Jan 2026 13:09:12 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: macs Binary: macs Architecture: any Version: 3.0.2-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Andreas Tille Homepage: https://github.com/taoliu/MACS/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/macs Vcs-Git: https://salsa.debian.org/med-team/macs.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc Package-List: macs deb science optional arch=any Checksums-Sha1: add8dce2a95862e95e94ada63a56f1035023163b 197484503 macs_3.0.2.orig.tar.gz 9a9ffd8e45bb719d88f6d1e38ad11ec7f3f3fb5d 1267996 macs_3.0.2-2.debian.tar.xz Checksums-Sha256: 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 197484503 macs_3.0.2.orig.tar.gz ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 1267996 macs_3.0.2-2.debian.tar.xz Files: 2f1ec9ab99edddaf84958b65c305532e 197484503 macs_3.0.2.orig.tar.gz 5c2807358c8525971807a4e4f9c6bc80 1267996 macs_3.0.2-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmkrCEkRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBqMOBAAr8mjY0+hQR6afZDB9N6l1c/tbzEOvqQl 6aWPK9pzrvTrGsQF0mxOJSwv+y4K6EhRilO7mj4FxbXM6R1x044Xiuk64WqVegmB UGKaBWKbiciLITmGhiICaAihdIGYDkOefaRHHqcKsATt0WQIErFUXsOaHh2l0+ve my4KK+Oy/weohpGku4rjzZOMb2ykgTh7EczH4yEtAE97eDYdcNzdfqE/FXagGQY5 IM6+VJnEJaPc/hjPAtdNeP3q2UGCbFIOORcR7ElrlM1H0CFL8k+8e7nSeklOcRSE Od3s9E6upUDylxk9KOojNE4IUkWbxQlRpkBa8RN8AFml5GAg/he5xDxbXzJDEuJG 2gj8VJUxhoI7BtPKjy/VD9O2HzCv3i/s29LoOUtMk0vDLIYl6rd1ytFR5URaUwj0 IVWVziOz+j+Ax426R53pYc1mv0FyyGpLQEKN5fYincq35TTvpF2GCgW94QyQ2HEB /BvR696NWS8lOfPPSeYYu/XNGB2keKWzcqKKV04mEpOAE5zEKZCesLAq3lCI4dER Hw6w++IMIVEbhJZ9sUx+YJlSjjzqXLg4FkEsHqqS3D0IKaQSDX90vTB9WfK5B0fg 5pxgFLVizPsXactCBJtXBUvSpD7YnpZ0RjTfhGpCN457qhs8fyZH8ZpSm3fuAOBb R48zpUETLW0= =c3K0 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./macs_3.0.2-2.dsc: unsupported subcommand dpkg-source: info: extracting macs in /build/reproducible-path/macs-3.0.2 dpkg-source: info: unpacking macs_3.0.2.orig.tar.gz dpkg-source: info: unpacking macs_3.0.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying keep_debug dpkg-source: info: applying simde.patch dpkg-source: info: applying long_is_not_defined.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 3.0.2-2+b1 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1765735894 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 3.0.2-2+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by riscv64 Build Daemon (rv-osuosl-05) dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' rm -Rf test/macs3.0.2-2+b1* test/speedtest* rm -f debian/*.1 debian/*-man-include make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' for pyx in $(find MACS3/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild plugin_pyproject:131: Building wheel for python3.14 with "build" module I: pybuild base:317: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3 * Building wheel... Compiling MACS3/Signal/HMMR_EM.pyx because it changed. Compiling MACS3/Signal/HMMR_Signal_Processing.pyx because it changed. Compiling MACS3/Signal/HMMR_HMM.pyx because it changed. Compiling MACS3/Signal/Prob.pyx because it changed. Compiling MACS3/Signal/Region.pyx because it changed. Compiling MACS3/Signal/Pileup.pyx because it changed. Compiling MACS3/Signal/PileupV2.pyx because it changed. Compiling MACS3/Signal/PeakModel.pyx because it changed. Compiling MACS3/Signal/PeakDetect.pyx because it changed. Compiling MACS3/Signal/SignalProcessing.pyx because it changed. Compiling MACS3/Signal/FixWidthTrack.pyx because it changed. Compiling MACS3/Signal/PairedEndTrack.pyx because it changed. Compiling MACS3/Signal/BedGraph.pyx because it changed. Compiling MACS3/Signal/ScoreTrack.pyx because it changed. Compiling MACS3/Signal/CallPeakUnit.pyx because it changed. Compiling MACS3/Signal/VariantStat.pyx because it changed. Compiling MACS3/Signal/ReadAlignment.pyx because it changed. Compiling MACS3/Signal/RACollection.pyx because it changed. Compiling MACS3/Signal/UnitigRACollection.pyx because it changed. Compiling MACS3/Signal/PosReadsInfo.pyx because it changed. Compiling MACS3/Signal/PeakVariants.pyx because it changed. Compiling MACS3/IO/Parser.pyx because it changed. Compiling MACS3/IO/PeakIO.pyx because it changed. Compiling MACS3/IO/BedGraphIO.pyx because it changed. Compiling MACS3/IO/BAM.pyx because it changed. [ 1/25] Cythonizing MACS3/IO/BAM.pyx [ 2/25] Cythonizing MACS3/IO/BedGraphIO.pyx [ 3/25] Cythonizing MACS3/IO/Parser.pyx [ 4/25] Cythonizing MACS3/IO/PeakIO.pyx [ 5/25] Cythonizing MACS3/Signal/BedGraph.pyx [ 6/25] Cythonizing MACS3/Signal/CallPeakUnit.pyx [ 7/25] Cythonizing MACS3/Signal/FixWidthTrack.pyx [ 8/25] Cythonizing MACS3/Signal/HMMR_EM.pyx [ 9/25] Cythonizing MACS3/Signal/HMMR_HMM.pyx [10/25] Cythonizing MACS3/Signal/HMMR_Signal_Processing.pyx [11/25] Cythonizing MACS3/Signal/PairedEndTrack.pyx [12/25] Cythonizing MACS3/Signal/PeakDetect.pyx [13/25] Cythonizing MACS3/Signal/PeakModel.pyx [14/25] Cythonizing MACS3/Signal/PeakVariants.pyx [15/25] Cythonizing MACS3/Signal/Pileup.pyx [16/25] Cythonizing MACS3/Signal/PileupV2.pyx [17/25] Cythonizing MACS3/Signal/PosReadsInfo.pyx [18/25] Cythonizing MACS3/Signal/Prob.pyx [19/25] Cythonizing MACS3/Signal/RACollection.pyx [20/25] Cythonizing MACS3/Signal/ReadAlignment.pyx [21/25] Cythonizing MACS3/Signal/Region.pyx [22/25] Cythonizing MACS3/Signal/ScoreTrack.pyx [23/25] Cythonizing MACS3/Signal/SignalProcessing.pyx [24/25] Cythonizing MACS3/Signal/UnitigRACollection.pyx [25/25] Cythonizing MACS3/Signal/VariantStat.pyx /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-riscv64-cpython-314/MACS3 copying MACS3/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3 creating build/lib.linux-riscv64-cpython-314/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-riscv64-cpython-314/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/IO creating build/lib.linux-riscv64-cpython-314/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Signal creating build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands creating build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-riscv64-cpython-314/MACS3/Signal riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.HMMR_Signal_Processing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.HMMR_HMM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.Prob' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Prob.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Prob.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Prob.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.Region' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Region.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Region.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Region.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.Pileup' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Pileup.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Pileup.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/cPosValCalculation.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Pileup.o build/temp.linux-riscv64-cpython-314/MACS3/Signal/cPosValCalculation.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PileupV2.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PeakModel' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakModel.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.SignalProcessing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.BedGraph' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/BedGraph.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/VariantStat.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/RACollection.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/swalign.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/htab.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mag.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/misc.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rle.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rope.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/RACollection.o build/temp.linux-riscv64-cpython-314/MACS3/Signal/swalign.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bfc.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bseq.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bubble.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/htab.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/ksw.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/kthread.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mag.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/misc.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mrope.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rld0.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rle.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rope.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/unitig.o -L/usr/lib/riscv64-linux-gnu -lm -lz -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PosReadsInfo' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PeakVariants' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.Parser' extension creating build/temp.linux-riscv64-cpython-314/MACS3/IO riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/Parser.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/Parser.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/Parser.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.PeakIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/PeakIO.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/PeakIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/PeakIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.BAM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/BAM.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/BAM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/BAM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so running build_scripts creating build/scripts-3.14 copying and adjusting bin/macs3 -> build/scripts-3.14 changing mode of build/scripts-3.14/macs3 from 644 to 755 installing to build/bdist.linux-riscv64/wheel running install running install_lib creating build/bdist.linux-riscv64/wheel creating build/bdist.linux-riscv64/wheel/MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/Constants.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/Logger.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/OptValidator.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities creating build/bdist.linux-riscv64/wheel/MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands creating build/bdist.linux-riscv64/wheel/MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/OutputWriter.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO creating build/bdist.linux-riscv64/wheel/MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3 running install_egg_info running egg_info creating MACS3.egg-info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt writing manifest file 'MACS3.egg-info/SOURCES.txt' dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-riscv64/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.14/macs3 -> build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/.tmp-cuje4gcv/macs3-3.0.2-cp314-cp314-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-riscv64/wheel Successfully built macs3-3.0.2-cp314-cp314-linux_riscv64.whl I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.14 with "installer" module I: pybuild plugin_pyproject:131: Building wheel for python3.13 with "build" module I: pybuild base:317: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3 * Building wheel... /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-riscv64-cpython-313/MACS3 copying MACS3/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3 creating build/lib.linux-riscv64-cpython-313/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-riscv64-cpython-313/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/IO creating build/lib.linux-riscv64-cpython-313/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Signal creating build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands creating build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-riscv64-cpython-313/MACS3/Signal riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.HMMR_Signal_Processing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.HMMR_HMM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.Prob' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Prob.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Prob.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Prob.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.Region' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Region.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Region.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Region.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.Pileup' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Pileup.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Pileup.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/cPosValCalculation.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Pileup.o build/temp.linux-riscv64-cpython-313/MACS3/Signal/cPosValCalculation.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PileupV2.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PeakModel' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakModel.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.SignalProcessing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.BedGraph' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/BedGraph.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/VariantStat.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/RACollection.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/swalign.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/htab.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mag.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/misc.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rle.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rope.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/RACollection.o build/temp.linux-riscv64-cpython-313/MACS3/Signal/swalign.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bfc.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bseq.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bubble.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/htab.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/ksw.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/kthread.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mag.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/misc.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mrope.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rld0.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rle.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rope.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/unitig.o -L/usr/lib/riscv64-linux-gnu -lm -lz -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PosReadsInfo' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PeakVariants' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.Parser' extension creating build/temp.linux-riscv64-cpython-313/MACS3/IO riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/Parser.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/Parser.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/Parser.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.PeakIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/PeakIO.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/PeakIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/PeakIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.BAM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/BAM.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/BAM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/BAM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so running build_scripts creating build/scripts-3.13 copying and adjusting bin/macs3 -> build/scripts-3.13 changing mode of build/scripts-3.13/macs3 from 644 to 755 installing to build/bdist.linux-riscv64/wheel running install running install_lib creating build/bdist.linux-riscv64/wheel creating build/bdist.linux-riscv64/wheel/MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/Constants.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/Logger.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/OptValidator.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities creating build/bdist.linux-riscv64/wheel/MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands creating build/bdist.linux-riscv64/wheel/MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/OutputWriter.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO creating build/bdist.linux-riscv64/wheel/MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3 running install_egg_info running egg_info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-riscv64/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.13/macs3 -> build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/.tmp-wfm20let/macs3-3.0.2-cp313-cp313-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-riscv64/wheel Successfully built macs3-3.0.2-cp313-cp313-linux_riscv64.whl I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.13 with "installer" module PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info \ --name "macs3 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs3" > debian/macs3.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmac3_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs3_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info --version-string="3.0.2" \ --include debian/macs3_${subcommand}-man-include \ "python3 bin/macs3 ${subcommand}" > \ debian/macs3_${subcommand}.1; done make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_auto_test I: pybuild base:317: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build; python3.14 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.14.2, pytest-8.4.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ================== 65 passed, 3 skipped in 109.94s (0:01:49) =================== I: pybuild base:317: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build; python3.13 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.13.11, pytest-8.4.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ================== 65 passed, 3 skipped in 106.93s (0:01:46) =================== cd test && for PY3VER in 3.14 3.13; do \ export PATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/scripts:$PATH \ && export PYTHONPATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/build \ && ./cmdlinetest macs3.0.2-2+b1-${PY3VER} ; done 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:14:09 Max mem (KB): 304944 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:14:22 Max mem (KB): 297040 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install --destdir=debian/macs/ -a -O--buildsystem=pybuild I: pybuild plugin_pyproject:186: Copying package built for python3.14 to destdir I: pybuild plugin_pyproject:186: Copying package built for python3.13 to destdir dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild debian/rules execute_before_dh_python3 make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' dh_python3 -a -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/macs/usr/bin/macs3 dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_3.0.2-2+b1_riscv64.deb'. dpkg-deb: building package 'macs' in '../macs_3.0.2-2+b1_riscv64.deb'. dpkg-genbuildinfo --build=any -O../macs_3.0.2-2+b1_riscv64.buildinfo dpkg-genchanges --build=any -O../macs_3.0.2-2+b1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-01-02T19:20:50Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Fri, 02 Jan 2026 19:20:55 +0000 | +------------------------------------------------------------------------------+ macs_3.0.2-2+b1_riscv64.changes: -------------------------------- Format: 1.8 Date: Sun, 14 Dec 2025 18:11:34 +0000 Source: macs (3.0.2-2) Binary: macs macs-dbgsym Binary-Only: yes Architecture: riscv64 Version: 3.0.2-2+b1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: riscv64 Build Daemon (rv-osuosl-05) Description: macs - Model-based Analysis of ChIP-Seq on short reads sequencers Changes: macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for riscv64; no source changes. * Rebuild with Python 3.14 as supported Checksums-Sha1: 73d97e18e96e538e811e46de9fd2fe9a8df675d7 28366932 macs-dbgsym_3.0.2-2+b1_riscv64.deb 10e87d5d915a7f59f78f4fa34a71117e74623884 7610 macs_3.0.2-2+b1_riscv64.buildinfo d9217e042ddb76a880c625a077e4a5875a373fe6 4209280 macs_3.0.2-2+b1_riscv64.deb Checksums-Sha256: 657dd43c758f256cdc3f7457a043f3512580a63315ecd9275db192ddb756969c 28366932 macs-dbgsym_3.0.2-2+b1_riscv64.deb 0d3148be14244e1bc3070cd920e95b6d989a34d6dda130d4e79ccf94fed12d82 7610 macs_3.0.2-2+b1_riscv64.buildinfo e5d10b4c40696110516f125ba33f827dbc76a2ff89dd3240fd41ceb5b5441840 4209280 macs_3.0.2-2+b1_riscv64.deb Files: ccc1fc375f50a9d3cee3efe5070dc348 28366932 debug optional macs-dbgsym_3.0.2-2+b1_riscv64.deb 316af3d484887dea8bc2e29fe097ada1 7610 science optional macs_3.0.2-2+b1_riscv64.buildinfo 072c8663280d018d869ff29aeb3fb259 4209280 science optional macs_3.0.2-2+b1_riscv64.deb +------------------------------------------------------------------------------+ | Buildinfo Fri, 02 Jan 2026 19:20:59 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: macs (3.0.2-2) Binary: macs macs-dbgsym Architecture: riscv64 Version: 3.0.2-2+b1 Binary-Only-Changes: macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for riscv64; no source changes. * Rebuild with Python 3.14 as supported . -- riscv64 Build Daemon (rv-osuosl-05) Sun, 14 Dec 2025 18:11:34 +0000 Checksums-Md5: ccc1fc375f50a9d3cee3efe5070dc348 28366932 macs-dbgsym_3.0.2-2+b1_riscv64.deb 072c8663280d018d869ff29aeb3fb259 4209280 macs_3.0.2-2+b1_riscv64.deb Checksums-Sha1: 73d97e18e96e538e811e46de9fd2fe9a8df675d7 28366932 macs-dbgsym_3.0.2-2+b1_riscv64.deb d9217e042ddb76a880c625a077e4a5875a373fe6 4209280 macs_3.0.2-2+b1_riscv64.deb Checksums-Sha256: 657dd43c758f256cdc3f7457a043f3512580a63315ecd9275db192ddb756969c 28366932 macs-dbgsym_3.0.2-2+b1_riscv64.deb e5d10b4c40696110516f125ba33f827dbc76a2ff89dd3240fd41ceb5b5441840 4209280 macs_3.0.2-2+b1_riscv64.deb Build-Origin: Debian Build-Architecture: riscv64 Build-Date: Fri, 02 Jan 2026 19:20:46 +0000 Build-Path: /build/reproducible-path/macs-3.0.2 Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.18.1-3), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-1), bc (= 1.07.1-4), binutils (= 2.45.50.20251209-1), binutils-common (= 2.45.50.20251209-1), binutils-riscv64-linux-gnu (= 2.45.50.20251209-1), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-9), cpp-15-riscv64-linux-gnu (= 15.2.0-9), cpp-riscv64-linux-gnu (= 4:15.2.0-4), cython3 (= 3.1.6+dfsg-2+b1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.29), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-python (= 6.20251204.1), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-9), g++-15-riscv64-linux-gnu (= 15.2.0-9), g++-riscv64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-9), gcc-15-base (= 15.2.0-9), gcc-15-riscv64-linux-gnu (= 15.2.0-9), gcc-riscv64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), help2man (= 1.49.3+b1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-9), libatomic1 (= 15.2.0-9), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.45.50.20251209-1), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.42-5), libc-dev-bin (= 2.42-5), libc-gconv-modules-extra (= 2.42-5), libc6 (= 2.42-5), libc6-dev (= 2.42-5), libcap-ng0 (= 0.8.5-4+b2), libcap2 (= 1:2.75-10+b2), libcc1-0 (= 15.2.0-9), libcrypt-dev (= 1:4.5.1-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.45.50.20251209-1), libctf0 (= 2.45.50.20251209-1), libdb5.3t64 (= 5.3.28+dfsg2-11), libdebconfclient0 (= 0.282), libdebhelper-perl (= 13.29), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.194-1), libexpat1 (= 2.7.3-1), libexpat1-dev (= 2.7.3-1), libffi8 (= 3.5.2-3), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-9), libgcc-s1 (= 15.2.0-9), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgfortran5 (= 15.2.0-9), libgmp10 (= 2:6.3.0+dfsg-5), libgomp1 (= 15.2.0-9), libgprofng0 (= 2.45.50.20251209-1), libisl23 (= 0.27-1), libitm1 (= 15.2.0-9), libjansson4 (= 2.14-2+b3), libjs-sphinxdoc (= 8.2.3-11), liblapack3 (= 3.12.1-7), liblocale-gettext-perl (= 1.07-7+b1), liblsan0 (= 15.2.0-9), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20251123-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libproc2-0 (= 2:4.0.4-9), libpython3-all-dev (= 3.13.9-2), libpython3-dev (= 3.13.9-2), libpython3-stdlib (= 3.13.9-2), libpython3.13 (= 3.13.11-1+b1), libpython3.13-dev (= 3.13.11-1+b1), libpython3.13-minimal (= 3.13.11-1+b1), libpython3.13-stdlib (= 3.13.11-1+b1), libpython3.14 (= 3.14.2-1+b1), libpython3.14-dev (= 3.14.2-1+b1), libpython3.14-minimal (= 3.14.2-1+b1), libpython3.14-stdlib (= 3.14.2-1+b1), libqhull-r8.0 (= 2020.2-7), libreadline8t64 (= 8.3-3), libselinux1 (= 3.9-4+b1), libsframe2 (= 2.45.50.20251209-1), libsimde-dev (= 0.8.2-3), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-9), libstdc++6 (= 15.2.0-9), libsystemd0 (= 259~rc2-1), libtinfo6 (= 6.5+20251123-1), libtool (= 2.5.4-9), libtsan2 (= 15.2.0-9), libubsan1 (= 15.2.0-9), libuchardet0 (= 0.0.8-2), libudev1 (= 259~rc2-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.17.10-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), ncurses-base (= 6.5+20251123-1), ncurses-bin (= 6.5+20251123-1), netbase (= 6.5), openssl (= 3.5.4-1), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.22), procps (= 2:4.0.4-9), pybuild-plugin-pyproject (= 6.20251204.1), python3 (= 3.13.9-2), python3-all (= 3.13.9-2), python3-all-dev (= 3.13.9-2), python3-autocommand (= 2.2.2-3), python3-build (= 1.2.2-4), python3-cykhash (= 2.0.0-3+b4), python3-decorator (= 5.2.1-2), python3-dev (= 3.13.9-2), python3-hmmlearn (= 0.3.2-2+b3), python3-inflect (= 7.5.0-1), python3-iniconfig (= 2.1.0-1), python3-installer (= 0.7.0+dfsg1-3), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-joblib (= 1.5.2-1), python3-minimal (= 3.13.9-2), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-2+b1), python3-numpy-dev (= 1:2.3.5+ds-2+b1), python3-packaging (= 25.0-1), python3-pip (= 25.3+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-pluggy (= 1.6.0-1), python3-pygments (= 2.18.0+dfsg-2), python3-pyproject-hooks (= 1.2.0-1), python3-pytest (= 8.4.2-1), python3-scipy (= 1.16.3-2), python3-setuptools (= 78.1.1-0.1), python3-sklearn (= 1.7.2+dfsg-3), python3-sklearn-lib (= 1.7.2+dfsg-3+b2), python3-threadpoolctl (= 3.1.0-1), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-wheel (= 0.46.1-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.11-1+b1), python3.13-dev (= 3.13.11-1+b1), python3.13-minimal (= 3.13.11-1+b1), python3.14 (= 3.14.2-1+b1), python3.14-dev (= 3.14.2-1+b1), python3.14-minimal (= 3.14.2-1+b1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2), sensible-utils (= 0.0.26), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tzdata (= 2025c-1), util-linux (= 2.41.2-4), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1765735894" +------------------------------------------------------------------------------+ | Package contents Fri, 02 Jan 2026 19:21:00 +0000 | +------------------------------------------------------------------------------+ macs-dbgsym_3.0.2-2+b1_riscv64.deb ---------------------------------- new Debian package, version 2.0. size 28366932 bytes: control archive=2880 bytes. 2387 bytes, 12 lines control 5382 bytes, 51 lines md5sums Package: macs-dbgsym Source: macs (3.0.2-2) Version: 3.0.2-2+b1 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 29351 Depends: macs (= 3.0.2-2+b1) Section: debug Priority: optional Description: debug symbols for macs Build-Ids: 0f53d44e58ff5307cf375522dda52ca48f7ebb5c 1467af5d09b3ac78c13dd9020e4c0a8a5422f128 2871303da6d1bbcaecce2ccfb63d2086262f20ed 2b74016c7a7cafb3eeae99b6af44068e0adf446a 2d00f26052e82c7a340695141ce1b6c2617d199e 2d4c3ad69e52e8e4ebc111b1bc00945bae500eeb 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archive=3944 bytes. 1114 bytes, 19 lines control 10343 bytes, 102 lines md5sums 259 bytes, 12 lines * postinst #!/bin/sh 405 bytes, 12 lines * prerm #!/bin/sh Package: macs Source: macs (3.0.2-2) Version: 3.0.2-2+b1 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 11776 Depends: python3-numpy2-abi0 | python3-numpy-abi9, python3 (<< 3.15), python3 (>= 3.13~), python3-cykhash, python3-hmmlearn, python3-numpy, python3-scipy, python3-sklearn, python3:any, libc6 (>= 2.38), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/taoliu/MACS/ Description: Model-based Analysis of ChIP-Seq on short reads sequencers MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. 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2046 2025-12-14 18:11 ./usr/share/man/man1/macs3_filterdup.1.gz -rw-r--r-- root/root 1717 2025-12-14 18:11 ./usr/share/man/man1/macs3_pileup.1.gz -rw-r--r-- root/root 1867 2025-12-14 18:11 ./usr/share/man/man1/macs3_predictd.1.gz -rw-r--r-- root/root 1595 2025-12-14 18:11 ./usr/share/man/man1/macs3_randsample.1.gz -rw-r--r-- root/root 1361 2025-12-14 18:11 ./usr/share/man/man1/macs3_refinepeak.1.gz +------------------------------------------------------------------------------+ | Post Build Fri, 02 Jan 2026 19:21:10 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Fri, 02 Jan 2026 19:21:10 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Fri, 02 Jan 2026 19:21:28 +0000 | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 3610188 Build-Time: 22258 Distribution: unstable Host Architecture: riscv64 Install-Time: 26 Job: /srv/rebuilderd/tmp/rebuilderdKQ9wej/inputs/macs_3.0.2-2.dsc Machine Architecture: riscv64 Package: macs Package-Time: 22394 Source-Version: 3.0.2-2 Space: 3610188 Status: successful Version: 3.0.2-2+b1 -------------------------------------------------------------------------------- Finished at 2026-01-02T19:20:50Z Build needed 06:13:14, 3610188k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdKQ9wej/out checking macs-dbgsym_3.0.2-2+b1_riscv64.deb: size differs for macs-dbgsym_3.0.2-2+b1_riscv64.deb