=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3_riscv64.buildinfo Source: macs Version: 3.0.2-3 rebuilderd-worker node: riscv64-07 +------------------------------------------------------------------------------+ | Downloading sources Fri, 06 Mar 2026 13:55:47 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [137 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [105 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [156 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2464 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [8308 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.4 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.5 kB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2572 B] Get:22 https://deb.debian.org/debian experimental/main Sources [444 kB] Fetched 34.3 MB in 44s (776 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-3.dsc' macs_3.0.2-3.dsc 1807 SHA256:faba8326de7358bb1ee88fa0ec9e4f7ba9502ee24ff48f9c4d12e46747826d0b 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2.orig.tar.gz' macs_3.0.2.orig.tar.gz 197484503 SHA256:33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-3.debian.tar.xz' macs_3.0.2-3.debian.tar.xz 1268004 SHA256:8dc8389a7091127607d6805fb142c3985c9d128597e37d280b9ca334165bbae4 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 macs_3.0.2.orig.tar.gz 8dc8389a7091127607d6805fb142c3985c9d128597e37d280b9ca334165bbae4 macs_3.0.2-3.debian.tar.xz faba8326de7358bb1ee88fa0ec9e4f7ba9502ee24ff48f9c4d12e46747826d0b macs_3.0.2-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Fri, 06 Mar 2026 13:57:15 +0000 | +------------------------------------------------------------------------------+ Rebuilding macs=3.0.2-3 in /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdfAhviR/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3_riscv64.buildinfo /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3_riscv64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/macs-3.0.2 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260302T143911Z forky InRelease [137 kB] Get:3 http://deb.debian.org/debian unstable/main riscv64 Packages [9904 kB] Get:4 http://snapshot.debian.org/archive/debian/20260302T143911Z forky/main riscv64 Packages [9328 kB] Fetched 19.6 MB in 13s (1527 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260302T143911Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main riscv64 build-essential riscv64 12.12 [4628 B] Fetched 4628 B in 0s (78.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinjxgmuj/build-essential_12.12_riscv64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260302T143911Z forky/main riscv64 libdpkg-perl all 1.23.5 [668 kB] Fetched 668 kB in 0s (7149 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy9ukabpd/libdpkg-perl_1.23.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (580 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxirqqbi5/python3-decorator_5.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (478 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe0obdhik/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 man-db riscv64 2.13.1-1 [1458 kB] Fetched 1458 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4evl6nyf/man-db_2.13.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (1276 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpir80og35/readline-common_8.3-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (202 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgdlmqow/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbtojekk/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 findutils riscv64 4.10.0-3 [706 kB] Fetched 706 kB in 0s (7664 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7iy2ur54/findutils_4.10.0-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-dev riscv64 3.13.12-1 [512 kB] Fetched 512 kB in 0s (6238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvoju8cu/python3.13-dev_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dash riscv64 0.5.12-12 [101 kB] Fetched 101 kB in 0s (1599 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmgw_koly/dash_0.5.12-12_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-riscv64-linux-gnu riscv64 4:15.2.0-5 [5320 B] Fetched 5320 B in 0s (97.2 kB/s) dpkg-name: info: moved 'cpp-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpe9xgl9iz/cpp-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (6447 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi2mqy0az/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tar riscv64 1.35+dfsg-4 [821 kB] Fetched 821 kB in 0s (7947 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnhlz7lxh/tar_1.35+dfsg-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libunistring5 riscv64 1.3-2+b1 [471 kB] Fetched 471 kB in 0s (5831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphi862cm1/libunistring5_1.3-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 tzdata all 2026a-1 [259 kB] Fetched 259 kB in 0s (3715 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1v_cz4g8/tzdata_2026a-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-3 [85.7 kB] Fetched 85.7 kB in 0s (1367 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpfjbqusxc/zlib1g_1.3.dfsg+really1.3.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gzip riscv64 1.13-1 [139 kB] Fetched 139 kB in 0s (2185 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwsily2pd/gzip_1.13-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbinutils riscv64 2.46-2 [509 kB] Fetched 509 kB in 0s (6174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxt33tgc_/libbinutils_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libreadline8t64 riscv64 8.3-4 [180 kB] Fetched 180 kB in 0s (2758 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps2668dud/libreadline8t64_8.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdebhelper-perl all 13.31 [75.7 kB] Fetched 75.7 kB in 0s (1270 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppelwpytd/libdebhelper-perl_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsqlite3-0 riscv64 3.46.1-9+b1 [907 kB] Fetched 907 kB in 0s (8724 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwqzo4wo/libsqlite3-0_3.46.1-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-bin riscv64 2.42-13 [610 kB] Fetched 610 kB in 0s (6745 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2md0x6b8/libc-bin_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (589 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl1affgq0/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 linux-libc-dev all 6.18.15-1 [1964 kB] Fetched 1964 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5r4xakbw/linux-libc-dev_6.18.15-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 mawk riscv64 1.3.4.20260129-1 [143 kB] Fetched 143 kB in 0s (2180 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmposddiww0/mawk_1.3.4.20260129-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 hostname riscv64 3.25 [10.7 kB] Fetched 10.7 kB in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgulqb0ts/hostname_3.25_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwbsi0l6r/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-packaging all 25.0-2 [56.7 kB] Fetched 56.7 kB in 0s (983 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiw46n3wh/python3-packaging_25.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13-minimal riscv64 3.13.12-1 [2172 kB] Fetched 2172 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_l0l3gru/python3.13-minimal_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 grep riscv64 3.12-1 [442 kB] Fetched 442 kB in 0s (5547 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_pmy1qo/grep_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-typeguard all 4.4.4-2 [37.2 kB] Fetched 37.2 kB in 0s (638 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpld7ue9rm/python3-typeguard_4.4.4-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260302T143911Z forky/main riscv64 dpkg-dev all 1.23.5 [1318 kB] Fetched 1318 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg7ae8n7c/dpkg-dev_1.23.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-bin riscv64 6.6+20251231-1 [443 kB] Fetched 443 kB in 0s (5446 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0wl4_ydx/ncurses-bin_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libncursesw6 riscv64 6.6+20251231-1 [141 kB] Fetched 141 kB in 0s (2237 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp4sssakx/libncursesw6_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-python all 7.20260125 [119 kB] Fetched 119 kB in 0s (1951 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3jg_xcm/dh-python_7.20260125_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14 riscv64 3.14.3-1 [2275 kB] Fetched 2275 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp58dkb4df/libpython3.14_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++ riscv64 4:15.2.0-5 [1332 B] Fetched 1332 B in 0s (23.5 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp93yv5tlo/g++_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bsdextrautils riscv64 2.41.3-4 [102 kB] Fetched 102 kB in 0s (1651 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_wmgmjdn/bsdextrautils_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14-dev riscv64 3.14.3-1 [515 kB] Fetched 515 kB in 0s (6319 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp937ucv9i/python3.14-dev_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b2 [36.7 kB] Fetched 36.7 kB in 0s (648 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx34tn66s/libmd0_1.1.0-2+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libatomic1 riscv64 15.2.0-14 [8544 B] Fetched 8544 B in 0s (158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb_xeizwr/libatomic1_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-dev riscv64 3.13.9-3 [10.8 kB] Fetched 10.8 kB in 0s (200 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoh4lowxn/libpython3-dev_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsimde-dev all 0.8.4~rc3-5 [500 kB] Fetched 500 kB in 1s (836 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkoa53yld/libsimde-dev_0.8.4~rc3-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 m4 riscv64 1.4.21-1 [330 kB] Fetched 330 kB in 0s (4493 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp9qk2bvv/m4_1.4.21-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblzma5 riscv64 5.8.2-2 [329 kB] Fetched 329 kB in 0s (4571 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu51qusy/liblzma5_5.8.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 rpcsvc-proto riscv64 1.4.3-1+b2 [62.3 kB] Fetched 62.3 kB in 0s (1084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxpn7l_i/rpcsvc-proto_1.4.3-1+b2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 coreutils riscv64 9.10-1 [3128 kB] Fetched 3128 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2qdetv51/coreutils_9.10-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (3691 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl46e2ts3/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-build all 1.4.0-1 [38.8 kB] Fetched 38.8 kB in 0s (668 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi61dnl3m/python3-build_1.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsmartcols1 riscv64 2.41.3-4 [155 kB] Fetched 155 kB in 0s (2438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_eq3jw67/libsmartcols1_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3rxdm74u/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 procps riscv64 2:4.0.4-9+b1 [879 kB] Fetched 879 kB in 0s (8418 kB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmprtkrz1bp/procps_4.0.4-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 make riscv64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (5736 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi5skyo01/make_4.4.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libubsan1 riscv64 15.2.0-14 [1178 kB] Fetched 1178 kB in 0s (9820 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptcb7g4se/libubsan1_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-autocommand all 2.2.2-4 [13.7 kB] Fetched 13.7 kB in 0s (242 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2v5ol_hn/python3-autocommand_2.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext-base riscv64 0.23.2-1 [244 kB] Fetched 244 kB in 0s (3607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptvp9i6a2/gettext-base_0.23.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 help2man riscv64 1.49.3+b1 [198 kB] Fetched 198 kB in 0s (2903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg3ju92ti/help2man_1.49.3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-typing-extensions all 4.15.0-2 [92.5 kB] Fetched 92.5 kB in 0s (1476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_uv30758/python3-typing-extensions_4.15.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-dev riscv64 3.13.12-1 [16.7 MB] Fetched 16.7 MB in 1s (17.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokjbwiux/libpython3.13-dev_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pluggy all 1.6.0-2 [27.2 kB] Fetched 27.2 kB in 0s (493 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp__nsixl7/python3-pluggy_1.6.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libctf0 riscv64 2.46-2 [96.1 kB] Fetched 96.1 kB in 0s (1593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53v85hac/libctf0_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-stdlib riscv64 3.13.12-1 [1936 kB] Fetched 1936 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv58vbee3/libpython3.13-stdlib_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (546 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9vr5s5x/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pytest all 9.0.2-4 [273 kB] Fetched 273 kB in 0s (733 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgzt7fzmn/python3-pytest_9.0.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstdc++-15-dev riscv64 15.2.0-14 [6157 kB] Fetched 6157 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4rnasuti/libstdc++-15-dev_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cython3 riscv64 3.1.6+dfsg-2+b1 [3270 kB] Fetched 3270 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4dii_re/cython3_3.1.6+dfsg-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pygments all 2.19.2+dfsg-1 [847 kB] Fetched 847 kB in 0s (8422 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7b0rvgdp/python3-pygments_2.19.2+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (1972 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpud15o6o5/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Fetched 18.6 kB in 0s (323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmugmaxrz/python3-installer_0.7.0+dfsg1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.context all 6.0.1-2 [8184 B] Fetched 8184 B in 0s (147 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdq7zuyll/python3-jaraco.context_6.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6 riscv64 2.42-13 [1422 kB] Fetched 1422 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfab2vxv4/libc6_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (7826 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbfuyb4wn/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-dev riscv64 3.14.3-1 [17.2 MB] Fetched 17.2 MB in 1s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv20yaf20/libpython3.14-dev_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1-dev riscv64 2.7.4-1 [338 kB] Fetched 338 kB in 0s (4076 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbeu2p3vn/libexpat1-dev_2.7.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpc3 riscv64 1.3.1-2+b1 [56.8 kB] Fetched 56.8 kB in 0s (973 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6cwobeba/libmpc3_1.3.1-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuchardet0 riscv64 0.0.8-2+b1 [68.9 kB] Fetched 68.9 kB in 0s (1183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbkljagm/libuchardet0_0.0.8-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcc1-0 riscv64 15.2.0-14 [40.0 kB] Fetched 40.0 kB in 0s (701 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzq3x_h15/libcc1-0_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-numpy riscv64 1:2.3.5+ds-3 [4237 kB] Fetched 4237 kB in 0s (14.7 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmw96t6t9/python3-numpy_2.3.5+ds-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-joblib all 1.5.2-1 [222 kB] Fetched 222 kB in 0s (3143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9uh14ns/python3-joblib_1.5.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules-bin riscv64 1.7.0-5+b1 [49.6 kB] Fetched 49.6 kB in 0s (864 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp52os30r4/libpam-modules-bin_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all riscv64 3.13.9-3 [1048 B] Fetched 1048 B in 0s (18.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1ts08nj/python3-all_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.46-1+b1 [297 kB] Fetched 297 kB in 0s (4236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8b8ijg8i/libpcre2-8-0_10.46-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblkid1 riscv64 2.41.3-4 [194 kB] Fetched 194 kB in 0s (3025 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbxw274l0/libblkid1_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblapack3 riscv64 3.12.1-7+b1 [1971 kB] Fetched 1971 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm8ripht6/liblapack3_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl riscv64 3.5.5-1 [1478 kB] Fetched 1478 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnzx_dcdd/openssl_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-all-dev riscv64 3.13.9-3 [1072 B] Fetched 1072 B in 0s (19.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx18vn9w8/python3-all-dev_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Fetched 27.9 kB in 0s (494 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2r19_dkn/libjs-sphinxdoc_8.2.3-12_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3 riscv64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (479 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmwn0pmrt/python3_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libasan8 riscv64 15.2.0-14 [2938 kB] Fetched 2938 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp49_xhjkx/libasan8_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtinfo6 riscv64 6.6+20251231-1 [352 kB] Fetched 352 kB in 0s (4800 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp8p9_t1v/libtinfo6_6.6+20251231-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 automake all 1:1.18.1-4 [877 kB] Fetched 877 kB in 0s (8585 kB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmpodn1fqsi/automake_1.18.1-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260302T143911Z forky/main riscv64 dpkg riscv64 1.23.5 [1528 kB] Fetched 1528 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphgwc3pj8/dpkg_1.23.5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam-modules riscv64 1.7.0-5+b1 [176 kB] Fetched 176 kB in 0s (2727 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi7ej_eu5/libpam-modules_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 openssl-provider-legacy riscv64 3.5.5-1 [313 kB] Fetched 313 kB in 0s (4204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc8a8x8be/openssl-provider-legacy_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libffi8 riscv64 3.5.2-3+b1 [22.3 kB] Fetched 22.3 kB in 0s (396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm1k23kh9/libffi8_3.5.2-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 xz-utils riscv64 5.8.2-2 [705 kB] Fetched 705 kB in 0s (7712 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpycgv89do/xz-utils_5.8.2-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libperl5.40 riscv64 5.40.1-7 [3952 kB] Fetched 3952 kB in 0s (14.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzh7ucu44/libperl5.40_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-iniconfig all 2.1.0-2 [7540 B] Fetched 7540 B in 0s (139 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd3tlv608/python3-iniconfig_2.1.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6+b1 [40.1 kB] Fetched 40.1 kB in 0s (711 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3yffp6j/libbz2-1.0_1.0.8-6+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bash riscv64 5.3-2 [1561 kB] Fetched 1561 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprmgg2iaq/bash_5.3-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bc riscv64 1.07.1-4 [104 kB] Fetched 104 kB in 0s (1686 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphuvxf2a2/bc_1.07.1-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libselinux1 riscv64 3.9-4+b1 [89.1 kB] Fetched 89.1 kB in 0s (1405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_6rry75/libselinux1_3.9-4+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgcc-15-dev riscv64 15.2.0-14 [5704 kB] Fetched 5704 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5l08dcea/libgcc-15-dev_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-11 [719 kB] Fetched 719 kB in 0s (7332 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpirsegz7e/libdb5.3t64_5.3.28+dfsg2-11_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libssl3t64 riscv64 3.5.5-1 [2211 kB] Fetched 2211 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm84zx00r/libssl3t64_3.5.5-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pip all 26.0.1+dfsg-1 [1390 kB] Fetched 1390 kB in 1s (1921 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo7xs1jrv/python3-pip_26.0.1+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ca-certificates all 20260223 [158 kB] Fetched 158 kB in 0s (2500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2kgxwobh/ca-certificates_20260223_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libelf1t64 riscv64 0.194-1 [190 kB] Fetched 190 kB in 0s (2953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwd3z1t4/libelf1t64_0.194-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-gconv-modules-extra riscv64 2.42-13 [1125 kB] Fetched 1125 kB in 0s (9596 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplyubkjbm/libc-gconv-modules-extra_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 pybuild-plugin-pyproject all 7.20260125 [13.0 kB] Fetched 13.0 kB in 0s (236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcwl1bl7r/pybuild-plugin-pyproject_7.20260125_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libblas3 riscv64 3.12.1-7+b1 [123 kB] Fetched 123 kB in 0s (2023 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0rxzeqx_/libblas3_3.12.1-7+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debianutils riscv64 5.23.2 [91.7 kB] Fetched 91.7 kB in 0s (1539 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpptchmqx9/debianutils_5.23.2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (4016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgb6ewpgi/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 groff-base riscv64 1.23.0-10 [1163 kB] Fetched 1163 kB in 0s (9831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbehct9za/groff-base_1.23.0-10_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13 riscv64 3.13.12-1 [2175 kB] Fetched 2175 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppqlpfvtz/libpython3.13_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmpfr6 riscv64 4.2.2-2+b1 [667 kB] Fetched 667 kB in 0s (7295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpb65o57/libmpfr6_4.2.2-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-stdlib riscv64 3.13.9-3 [10.6 kB] Fetched 10.6 kB in 0s (191 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmra00ia6/libpython3-stdlib_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc-dev-bin riscv64 2.42-13 [60.4 kB] Fetched 60.4 kB in 0s (1040 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfpur0vio/libc-dev-bin_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-sklearn all 1.8.0+dfsg-3 [2652 kB] Fetched 2652 kB in 1s (3197 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpflizlygg/python3-sklearn_1.8.0+dfsg-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libisl23 riscv64 0.27-1+b1 [664 kB] Fetched 664 kB in 0s (7029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu19q13a_/libisl23_0.27-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libexpat1 riscv64 2.7.4-1 [111 kB] Fetched 111 kB in 0s (1831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpde21of_4/libexpat1_2.7.4-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic1t64 riscv64 1:5.46-5+b1 [117 kB] Fetched 117 kB in 0s (1863 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp2o18anrg/libmagic1t64_5.46-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblocale-gettext-perl riscv64 1.07-8 [15.1 kB] Fetched 15.1 kB in 0s (268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu03lfvi/liblocale-gettext-perl_1.07-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0yoxxeai/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-numpy-dev riscv64 1:2.3.5+ds-3 [185 kB] Fetched 185 kB in 0s (2804 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmp7fbimfdj/python3-numpy-dev_2.3.5+ds-3_riscv64.deb' Downloading dependency 1 of 216: build-essential:riscv64=12.12 Downloading dependency 2 of 216: libdpkg-perl:riscv64=1.23.5 Downloading dependency 3 of 216: python3-decorator:riscv64=5.2.1-2 Downloading dependency 4 of 216: sensible-utils:riscv64=0.0.26 Downloading dependency 5 of 216: man-db:riscv64=2.13.1-1 Downloading dependency 6 of 216: readline-common:riscv64=8.3-4 Downloading dependency 7 of 216: python3-zipp:riscv64=3.23.0-1 Downloading dependency 8 of 216: init-system-helpers:riscv64=1.69 Downloading dependency 9 of 216: findutils:riscv64=4.10.0-3 Downloading dependency 10 of 216: python3.13-dev:riscv64=3.13.12-1 Downloading dependency 11 of 216: dash:riscv64=0.5.12-12 Downloading dependency 12 of 216: cpp-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 13 of 216: libtool:riscv64=2.5.4-9 Downloading 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121 of 216: libisl23:riscv64=0.27-1+b1 Downloading dependency 122 of 216: libexpat1:riscv64=2.7.4-1 Downloading dependency 123 of 216: libmagic1t64:riscv64=1:5.46-5+b1 Downloading dependency 124 of 216: liblocale-gettext-perl:riscv64=1.07-8 Downloading dependency 125 of 216: perl-modules-5.40:riscv64=5.40.1-7 Downloading dependency 126 of 216: python3-numpy-dev:riscv64=1:2.3.5+ds-3 Downloading dependency 127 of 216: python3-jaraco.functools:riscv64=4.1.0-1Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo46jl2pd/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (1196 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6jlqt9c6/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-15-riscv64-linux-gnu riscv64 15.2.0-14 [14.8 MB] Fetched 14.8 MB in 1s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp21v638f5/cpp-15-riscv64-linux-gnu_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sed riscv64 4.9-2 [329 kB] Fetched 329 kB in 0s (4602 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq9clon1x/sed_4.9-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcrypt1 riscv64 1:4.5.1-1 [114 kB] Fetched 114 kB in 0s (1891 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmptr6ys2hg/libcrypt1_4.5.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libstdc++6 riscv64 15.2.0-14 [715 kB] Fetched 715 kB in 0s (7658 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp4_ra_tj/libstdc++6_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-dev riscv64 3.13.9-3 [26.0 kB] Fetched 26.0 kB in 0s (466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8w8l7a7z/python3-dev_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gettext riscv64 0.23.2-1 [1684 kB] Fetched 1684 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzdvkqth/gettext_0.23.2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl riscv64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (3697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4ee66of/perl_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 sysvinit-utils riscv64 3.15-6 [34.6 kB] Fetched 34.6 kB in 0s (597 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4g25qxa5/sysvinit-utils_3.15-6_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 file riscv64 1:5.46-5+b1 [43.5 kB] Fetched 43.5 kB in 0s (736 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpfb65i97i/file_5.46-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-cykhash riscv64 2.0.0-3+b4 [674 kB] Fetched 674 kB in 1s (1329 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpigw3e4t4/python3-cykhash_2.0.0-3+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-15-base riscv64 15.2.0-14 [35.8 kB] Fetched 35.8 kB in 0s (594 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_vcqcp_w/gcc-15-base_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpam0g riscv64 1.7.0-5+b1 [70.7 kB] Fetched 70.7 kB in 0s (1237 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5g5xx0tc/libpam0g_1.7.0-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-minimal riscv64 3.14.3-1 [893 kB] Fetched 893 kB in 0s (8643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2fieuqsr/libpython3.14-minimal_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (1030 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgvp4rprm/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc riscv64 4:15.2.0-5 [5156 B] Fetched 5156 B in 0s (94.3 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpu0ar2xg3/gcc_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmount1 riscv64 2.41.3-4 [227 kB] Fetched 227 kB in 0s (3457 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdoyoclz2/libmount1_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3-all-dev riscv64 3.13.9-3 [1072 B] Fetched 1072 B in 0s (19.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp257f3gd4/libpython3-all-dev_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14 riscv64 3.14.3-1 [836 kB] Fetched 836 kB in 0s (8466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy65t63po/python3.14_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-15-riscv64-linux-gnu riscv64 15.2.0-14 [28.9 MB] Fetched 28.9 MB in 2s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg5chtx25/gcc-15-riscv64-linux-gnu_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit1 riscv64 1:4.1.2-1+b1 [58.7 kB] Fetched 58.7 kB in 0s (1010 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_vxldqli/libaudit1_4.1.2-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsystemd0 riscv64 260~rc2-1 [456 kB] Fetched 456 kB in 0s (5753 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparbh0f8v/libsystemd0_260~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libudev1 riscv64 260~rc2-1 [133 kB] Fetched 133 kB in 0s (2164 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwyjfcj8b/libudev1_260~rc2-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libproc2-0 riscv64 2:4.0.4-9+b1 [65.1 kB] Fetched 65.1 kB in 0s (1126 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpmfkdz4lk/libproc2-0_4.0.4-9+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils-riscv64-linux-gnu riscv64 2.46-2 [898 kB] Fetched 898 kB in 0s (8788 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1lug1jgk/binutils-riscv64-linux-gnu_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libmagic-mgc riscv64 1:5.46-5+b1 [338 kB] Fetched 338 kB in 0s (4650 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpndzuofuk/libmagic-mgc_5.46-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 debhelper all 13.31 [932 kB] Fetched 932 kB in 0s (8915 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9zjt934/debhelper_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-15-riscv64-linux-gnu riscv64 15.2.0-14 [15.9 MB] Fetched 15.9 MB in 1s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnwfgq0by/g++-15-riscv64-linux-gnu_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 bzip2 riscv64 1.0.8-6+b1 [40.8 kB] Fetched 40.8 kB in 0s (696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxysfi19y/bzip2_1.0.8-6+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libtsan2 riscv64 15.2.0-14 [2654 kB] Fetched 2654 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz35sp8d_/libtsan2_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-minimal riscv64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (493 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjykz7kho/python3-minimal_3.13.9-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dh-autoreconf all 22 [12.2 kB] Fetched 12.2 kB in 0s (225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp83fgbejc/dh-autoreconf_22_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libattr1 riscv64 1:2.5.2-4 [23.0 kB] Fetched 23.0 kB in 0s (410 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-4_riscv64.deb' to '/srv/rebuilderd/tmp/tmpnjhhctgw/libattr1_2.5.2-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libuuid1 riscv64 2.41.3-4 [40.5 kB] Fetched 40.5 kB in 0s (719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxf0ilvcw/libuuid1_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libxml2-16 riscv64 2.15.1+dfsg-2+b1 [637 kB] Fetched 637 kB in 0s (7180 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_dak_a0e/libxml2-16_2.15.1+dfsg-2+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 perl-base riscv64 5.40.1-7 [1678 kB] Fetched 1678 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps6kwk65j/perl-base_5.40.1-7_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 patch riscv64 2.8-2 [134 kB] Fetched 134 kB in 0s (2203 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9xx0gth/patch_2.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Fetched 21.2 kB in 0s (380 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpan0dsf6n/python3-threadpoolctl_3.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-passwd riscv64 3.6.8 [54.8 kB] Fetched 54.8 kB in 0s (953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0j88v5w4/base-passwd_3.6.8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libqhull-r8.0 riscv64 2020.2-8 [247 kB] Fetched 247 kB in 0s (3697 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj67iyxs5/libqhull-r8.0_2020.2-8_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (3224 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5zm929j/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.14-minimal riscv64 3.14.3-1 [2270 kB] Fetched 2270 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp199_b2vm/python3.14-minimal_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp riscv64 4:15.2.0-5 [1572 B] Fetched 1572 B in 0s (29.3 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp8qpjwuiq/cpp_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (1732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_d1dn8mg/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgfortran5 riscv64 15.2.0-14 [420 kB] Fetched 420 kB in 0s (5210 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcb9cebi8/libgfortran5_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgcc-s1 riscv64 15.2.0-14 [61.5 kB] Fetched 61.5 kB in 0s (1085 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98gp1jdb/libgcc-s1_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libctf-nobfd0 riscv64 2.46-2 [163 kB] Fetched 163 kB in 0s (2600 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi66rfw0e/libctf-nobfd0_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-hmmlearn riscv64 0.3.2-3 [147 kB] Fetched 147 kB in 1s (226 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi63ua765/python3-hmmlearn_0.3.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-3 [996 kB] Fetched 996 kB in 0s (9231 kB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-3_riscv64.deb' to '/srv/rebuilderd/tmp/tmpl8c2pzfp/zlib1g-dev_1.3.dfsg+really1.3.1-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 base-files riscv64 14 [72.9 kB] Fetched 72.9 kB in 0s (1205 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjcrl3q0k/base-files_14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libcap-ng0 riscv64 0.9.1-1 [17.0 kB] Fetched 17.0 kB in 0s (302 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpshkah3ez/libcap-ng0_0.9.1-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (364 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz85e94jp/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Fetched 11.7 kB in 0s (211 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3gb5jswj/python3-pyproject-hooks_1.2.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-3+b1 [372 kB] Fetched 372 kB in 0s (4962 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp75vsmi9u/libzstd1_1.5.7+dfsg-3+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm6t64 riscv64 1.26-1+b1 [79.2 kB] Fetched 79.2 kB in 0s (1336 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf8c3m43f/libgdbm6t64_1.26-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 cpp-15 riscv64 15.2.0-14 [1276 B] Fetched 1276 B in 0s (22.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplau6cj35/cpp-15_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-15 riscv64 15.2.0-14 [525 kB] Fetched 525 kB in 0s (5863 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppmvouoe_/gcc-15_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-scipy riscv64 1.16.3-4 [18.6 MB] Fetched 18.6 MB in 1s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ta95_cs/python3-scipy_1.16.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libsframe3 riscv64 2.46-2 [85.8 kB] Fetched 85.8 kB in 0s (1488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqubu51z/libsframe3_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgprofng0 riscv64 2.46-2 [722 kB] Fetched 722 kB in 0s (7603 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw7s4z1qb/libgprofng0_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (259 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpl76culjo/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libjansson4 riscv64 2.14-2+b4 [40.1 kB] Fetched 40.1 kB in 0s (713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy6av57ew/libjansson4_2.14-2+b4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils riscv64 2.46-2 [285 kB] Fetched 285 kB in 0s (4018 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3e13d7ul/binutils_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libitm1 riscv64 15.2.0-14 [25.4 kB] Fetched 25.4 kB in 0s (386 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpewjfmuxr/libitm1_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (3380 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpochvngjz/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 binutils-common riscv64 2.46-2 [2635 kB] Fetched 2635 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbzqxnwa1/binutils-common_2.46-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libc6-dev riscv64 2.42-13 [3438 kB] Fetched 3438 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp275b3d50/libc6-dev_2.42-13_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 dwz riscv64 0.16-2 [115 kB] Fetched 115 kB in 0s (1889 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp24rez8ys/dwz_0.16-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-riscv64-linux-gnu riscv64 4:15.2.0-5 [1196 B] Fetched 1196 B in 0s (22.4 kB/s) dpkg-name: info: moved 'g++-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmpt56b4w2n/g++-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (412 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppkopc2mv/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.14-stdlib riscv64 3.14.3-1 [2247 kB] Fetched 2247 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3goyy02k/libpython3.14-stdlib_3.14.3-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpipeline1 riscv64 1.5.8-2 [40.8 kB] Fetched 40.8 kB in 0s (707 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumg_8f94/libpipeline1_1.5.8-2_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 util-linux riscv64 2.41.3-4 [1159 kB] Fetched 1159 kB in 0s (9868 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwx9pp5u4/util-linux_2.41.3-4_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 liblsan0 riscv64 15.2.0-14 [1326 kB] Fetched 1326 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp93n85dzv/liblsan0_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6hqptt5/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libacl1 riscv64 2.3.2-3 [32.7 kB] Fetched 32.7 kB in 0s (584 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4t64h2v3/libacl1_2.3.2-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-sklearn-lib riscv64 1.8.0+dfsg-3 [3982 kB] Fetched 3982 kB in 4s (969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxh3xst67/python3-sklearn-lib_1.8.0+dfsg-3_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgomp1 riscv64 15.2.0-14 [131 kB] Fetched 131 kB in 0s (2109 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2783xpo/libgomp1_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-wheel all 0.46.3-2 [27.5 kB] Fetched 27.5 kB in 0s (495 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd1xs5t_q/python3-wheel_0.46.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3.13 riscv64 3.13.12-1 [776 kB] Fetched 776 kB in 0s (8073 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdgakvra0/python3.13_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 autoconf all 2.72-6 [494 kB] Fetched 494 kB in 0s (6133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc49h2a5f/autoconf_2.72-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 gcc-riscv64-linux-gnu riscv64 4:15.2.0-5 [1432 B] Fetched 1432 B in 0s (25.2 kB/s) dpkg-name: info: moved 'gcc-riscv64-linux-gnu_4%3a15.2.0-5_riscv64.deb' to '/srv/rebuilderd/tmp/tmp_kdt20df/gcc-riscv64-linux-gnu_15.2.0-5_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libpython3.13-minimal riscv64 3.13.12-1 [862 kB] Fetched 862 kB in 0s (8559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6fyhzya4/libpython3.13-minimal_3.13.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 diffutils riscv64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (5351 kB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpcacp41i4/diffutils_3.12-1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-5+b1 [563 kB] Fetched 563 kB in 0s (6607 kB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b1_riscv64.deb' to '/srv/rebuilderd/tmp/tmpkz9j0fkn/libgmp10_6.3.0+dfsg-5+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (7828 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx4ifjnu7/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 g++-15 riscv64 15.2.0-14 [26.1 kB] Fetched 26.1 kB in 0s (465 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdt65aed/g++-15_15.2.0-14_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libgdbm-compat4t64 riscv64 1.26-1+b1 [53.1 kB] Fetched 53.1 kB in 0s (919 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7me56tsf/libgdbm-compat4t64_1.26-1+b1_riscv64.deb' Get:1 http://deb.debian.org/debian unstable/main riscv64 libdebconfclient0 riscv64 0.282+b2 [11.0 kB] Fetched 11.0 kB in 0s (202 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc_zz7m64/libdebconfclient0_0.282+b2_riscv64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_riscv64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_riscv64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpktrvi3jp/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture riscv64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk 127.0.0.1 - - [06/Mar/2026 22:07:14] code 404, message File not found 127.0.0.1 - - [06/Mar/2026 22:07:14] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:39853 ./ InRelease 127.0.0.1 - - [06/Mar/2026 22:07:14] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:39853 ./ Release [462 B] 127.0.0.1 - - [06/Mar/2026 22:07:14] code 404, message File not found 127.0.0.1 - - [06/Mar/2026 22:07:14] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:39853 ./ Release.gpg 127.0.0.1 - - [06/Mar/2026 22:07:14] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:39853 ./ Packages [261 kB] Fetched 261 kB in 0s (1997 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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Building dependency tree... Reading state information... build-essential is already the newest version (12.12). build-essential set to manually installed. libdpkg-perl is already the newest version (1.23.5). libdpkg-perl set to manually installed. python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. init-system-helpers is already the newest version (1.69). findutils is already the newest version (4.10.0-3). python3.13-dev is already the newest version (3.13.12-1). python3.13-dev set to manually installed. dash is already the newest version (0.5.12-12). cpp-riscv64-linux-gnu is already the newest version (4:15.2.0-5). cpp-riscv64-linux-gnu set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. tar is already the newest version (1.35+dfsg-4). libunistring5 is already the newest version (1.3-2+b1). libunistring5 set to manually installed. tzdata is already the newest version (2026a-1). tzdata set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-3). gzip is already the newest version (1.13-1). libbinutils is already the newest version (2.46-2). libbinutils set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libdebhelper-perl is already the newest version (13.31). libdebhelper-perl set to manually installed. libsqlite3-0 is already the newest version (3.46.1-9+b1). libsqlite3-0 set to manually installed. libc-bin is already the newest version (2.42-13). python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. linux-libc-dev is already the newest version (6.18.15-1). linux-libc-dev set to manually installed. mawk is already the newest version (1.3.4.20260129-1). hostname is already the newest version (3.25). dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. python3-packaging is already the newest version (25.0-2). python3-packaging set to manually installed. python3.13-minimal is already the newest version (3.13.12-1). python3.13-minimal set to manually installed. grep is already the newest version (3.12-1). python3-typeguard is already the newest version (4.4.4-2). python3-typeguard set to manually installed. dpkg-dev is already the newest version (1.23.5). dpkg-dev set to manually installed. ncurses-bin is already the newest version (6.6+20251231-1). libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. dh-python is already the newest version (7.20260125). dh-python set to manually installed. libpython3.14 is already the newest version (3.14.3-1). libpython3.14 set to manually installed. g++ is already the newest version (4:15.2.0-5). g++ set to manually installed. bsdextrautils is already the newest version (2.41.3-4). bsdextrautils set to manually installed. python3.14-dev is already the newest version (3.14.3-1). python3.14-dev set to manually installed. libmd0 is already the newest version (1.1.0-2+b2). libatomic1 is already the newest version (15.2.0-14). libatomic1 set to manually installed. libpython3-dev is already the newest version (3.13.9-3). libpython3-dev set to manually installed. libsimde-dev is already the newest version (0.8.4~rc3-5). libsimde-dev set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. liblzma5 is already the newest version (5.8.2-2). rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. coreutils is already the newest version (9.10-1). libpam-runtime is already the newest version (1.7.0-5). python3-build is already the newest version (1.4.0-1). python3-build set to manually installed. libsmartcols1 is already the newest version (2.41.3-4). python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. procps is already the newest version (2:4.0.4-9+b1). procps set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. libubsan1 is already the newest version (15.2.0-14). libubsan1 set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. help2man is already the newest version (1.49.3+b1). help2man set to manually installed. python3-typing-extensions is already the newest version (4.15.0-2). python3-typing-extensions set to manually installed. libpython3.13-dev is already the newest version (3.13.12-1). libpython3.13-dev set to manually installed. python3-pluggy is already the newest version (1.6.0-2). python3-pluggy set to manually installed. libctf0 is already the newest version (2.46-2). libctf0 set to manually installed. libpython3.13-stdlib is already the newest version (3.13.12-1). libpython3.13-stdlib set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3-pytest is already the newest version (9.0.2-4). python3-pytest set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-14). libstdc++-15-dev set to manually installed. cython3 is already the newest version (3.1.6+dfsg-2+b1). cython3 set to manually installed. python3-pygments is already the newest version (2.19.2+dfsg-1). python3-pygments set to manually installed. debconf is already the newest version (1.5.92). python3-installer is already the newest version (0.7.0+dfsg1-3). python3-installer set to manually installed. python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. libc6 is already the newest version (2.42-13). autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libpython3.14-dev is already the newest version (3.14.3-1). libpython3.14-dev set to manually installed. libexpat1-dev is already the newest version (2.7.4-1). libexpat1-dev set to manually installed. libmpc3 is already the newest version (1.3.1-2+b1). libmpc3 set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b1). libuchardet0 set to manually installed. libcc1-0 is already the newest version (15.2.0-14). libcc1-0 set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-3). python3-numpy set to manually installed. python3-joblib is already the newest version (1.5.2-1). python3-joblib set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5+b1). python3-all is already the newest version (3.13.9-3). python3-all set to manually installed. libpcre2-8-0 is already the newest version (10.46-1+b1). libblkid1 is already the newest version (2.41.3-4). liblapack3 is already the newest version (3.12.1-7+b1). liblapack3 set to manually installed. openssl is already the newest version (3.5.5-1). openssl set to manually installed. python3-all-dev is already the newest version (3.13.9-3). python3-all-dev set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-12). libjs-sphinxdoc set to manually installed. python3 is already the newest version (3.13.9-3). python3 set to manually installed. libasan8 is already the newest version (15.2.0-14). libasan8 set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). automake is already the newest version (1:1.18.1-4). automake set to manually installed. dpkg is already the newest version (1.23.5). libpam-modules is already the newest version (1.7.0-5+b1). openssl-provider-legacy is already the newest version (3.5.5-1). libffi8 is already the newest version (3.5.2-3+b1). libffi8 set to manually installed. xz-utils is already the newest version (5.8.2-2). xz-utils set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. python3-iniconfig is already the newest version (2.1.0-2). python3-iniconfig set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b1). bash is already the newest version (5.3-2). bc is already the newest version (1.07.1-4). bc set to manually installed. libselinux1 is already the newest version (3.9-4+b1). libgcc-15-dev is already the newest version (15.2.0-14). libgcc-15-dev set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). libssl3t64 is already the newest version (3.5.5-1). python3-pip is already the newest version (26.0.1+dfsg-1). python3-pip set to manually installed. ca-certificates is already the newest version (20260223). ca-certificates set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-13). pybuild-plugin-pyproject is already the newest version (7.20260125). pybuild-plugin-pyproject set to manually installed. libblas3 is already the newest version (3.12.1-7+b1). libblas3 set to manually installed. debianutils is already the newest version (5.23.2). ncurses-base is already the newest version (6.6+20251231-1). groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libpython3.13 is already the newest version (3.13.12-1). libpython3.13 set to manually installed. libmpfr6 is already the newest version (4.2.2-2+b1). libmpfr6 set to manually installed. libpython3-stdlib is already the newest version (3.13.9-3). libpython3-stdlib set to manually installed. libc-dev-bin is already the newest version (2.42-13). libc-dev-bin set to manually installed. python3-sklearn is already the newest version (1.8.0+dfsg-3). python3-sklearn set to manually installed. libisl23 is already the newest version (0.27-1+b1). libisl23 set to manually installed. libexpat1 is already the newest version (2.7.4-1). libexpat1 set to manually installed. libmagic1t64 is already the newest version (1:5.46-5+b1). libmagic1t64 set to manually installed. liblocale-gettext-perl is already the newest version (1.07-8). liblocale-gettext-perl set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-3). python3-numpy-dev set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. cpp-15-riscv64-linux-gnu is already the newest version (15.2.0-14). cpp-15-riscv64-linux-gnu set to manually installed. sed is already the newest version (4.9-2). libcrypt1 is already the newest version (1:4.5.1-1). libstdc++6 is already the newest version (15.2.0-14). libstdc++6 set to manually installed. python3-dev is already the newest version (3.13.9-3). python3-dev set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. sysvinit-utils is already the newest version (3.15-6). file is already the newest version (1:5.46-5+b1). file set to manually installed. python3-cykhash is already the newest version (2.0.0-3+b4). python3-cykhash set to manually installed. gcc-15-base is already the newest version (15.2.0-14). libpam0g is already the newest version (1.7.0-5+b1). libpython3.14-minimal is already the newest version (3.14.3-1). libpython3.14-minimal set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. gcc is already the newest version (4:15.2.0-5). gcc set to manually installed. libmount1 is already the newest version (2.41.3-4). libpython3-all-dev is already the newest version (3.13.9-3). libpython3-all-dev set to manually installed. python3.14 is already the newest version (3.14.3-1). python3.14 set to manually installed. gcc-15-riscv64-linux-gnu is already the newest version (15.2.0-14). gcc-15-riscv64-linux-gnu set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libsystemd0 is already the newest version (260~rc2-1). libudev1 is already the newest version (260~rc2-1). libproc2-0 is already the newest version (2:4.0.4-9+b1). libproc2-0 set to manually installed. binutils-riscv64-linux-gnu is already the newest version (2.46-2). binutils-riscv64-linux-gnu set to manually installed. libmagic-mgc is already the newest version (1:5.46-5+b1). libmagic-mgc set to manually installed. debhelper is already the newest version (13.31). debhelper set to manually installed. g++-15-riscv64-linux-gnu is already the newest version (15.2.0-14). g++-15-riscv64-linux-gnu set to manually installed. bzip2 is already the newest version (1.0.8-6+b1). bzip2 set to manually installed. libtsan2 is already the newest version (15.2.0-14). libtsan2 set to manually installed. python3-minimal is already the newest version (3.13.9-3). python3-minimal set to manually installed. dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libattr1 is already the newest version (1:2.5.2-4). libuuid1 is already the newest version (2.41.3-4). libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. perl-base is already the newest version (5.40.1-7). patch is already the newest version (2.8-2). patch set to manually installed. python3-threadpoolctl is already the newest version (3.1.0-1). python3-threadpoolctl set to manually installed. base-passwd is already the newest version (3.6.8). libqhull-r8.0 is already the newest version (2020.2-8). libqhull-r8.0 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. python3.14-minimal is already the newest version (3.14.3-1). python3.14-minimal set to manually installed. cpp is already the newest version (4:15.2.0-5). cpp set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libgfortran5 is already the newest version (15.2.0-14). libgfortran5 set to manually installed. libgcc-s1 is already the newest version (15.2.0-14). libctf-nobfd0 is already the newest version (2.46-2). libctf-nobfd0 set to manually installed. python3-hmmlearn is already the newest version (0.3.2-3). python3-hmmlearn set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-3). zlib1g-dev set to manually installed. base-files is already the newest version (14). libcap-ng0 is already the newest version (0.9.1-1). libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. python3-pyproject-hooks is already the newest version (1.2.0-1). python3-pyproject-hooks set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-3+b1). libgdbm6t64 is already the newest version (1.26-1+b1). libgdbm6t64 set to manually installed. cpp-15 is already the newest version (15.2.0-14). cpp-15 set to manually installed. gcc-15 is already the newest version (15.2.0-14). gcc-15 set to manually installed. python3-scipy is already the newest version (1.16.3-4). python3-scipy set to manually installed. libsframe3 is already the newest version (2.46-2). libsframe3 set to manually installed. libgprofng0 is already the newest version (2.46-2). libgprofng0 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. binutils is already the newest version (2.46-2). binutils set to manually installed. libitm1 is already the newest version (15.2.0-14). libitm1 set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. binutils-common is already the newest version (2.46-2). binutils-common set to manually installed. libc6-dev is already the newest version (2.42-13). libc6-dev set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. g++-riscv64-linux-gnu is already the newest version (4:15.2.0-5). g++-riscv64-linux-gnu set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libpython3.14-stdlib is already the newest version (3.14.3-1). libpython3.14-stdlib set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. util-linux is already the newest version (2.41.3-4). liblsan0 is already the newest version (15.2.0-14). liblsan0 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libacl1 is already the newest version (2.3.2-3). python3-sklearn-lib is already the newest version (1.8.0+dfsg-3). python3-sklearn-lib set to manually installed. libgomp1 is already the newest version (15.2.0-14). libgomp1 set to manually installed. python3-wheel is already the newest version (0.46.3-2). python3-wheel set to manually installed. python3.13 is already the newest version (3.13.12-1). python3.13 set to manually installed. autoconf is already the newest version (2.72-6). autoconf set to manually installed. gcc-riscv64-linux-gnu is already the newest version (4:15.2.0-5). gcc-riscv64-linux-gnu set to manually installed. libpython3.13-minimal is already the newest version (3.13.12-1). libpython3.13-minimal set to manually installed. diffutils is already the newest version (1:3.12-1). libgmp10 is already the newest version (2:6.3.0+dfsg-5+b1). python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. g++-15 is already the newest version (15.2.0-14). g++-15 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b1). libgdbm-compat4t64 set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk (Reading database ... 24475 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap._1FwPTWERk... I: success in 600.3595 seconds Downloading dependency 128 of 216: python3-more-itertools:riscv64=10.8.0-1 Downloading dependency 129 of 216: cpp-15-riscv64-linux-gnu:riscv64=15.2.0-14 Downloading dependency 130 of 216: sed:riscv64=4.9-2 Downloading dependency 131 of 216: libcrypt1:riscv64=1:4.5.1-1 Downloading dependency 132 of 216: libstdc++6:riscv64=15.2.0-14 Downloading dependency 133 of 216: python3-dev:riscv64=3.13.9-3 Downloading dependency 134 of 216: gettext:riscv64=0.23.2-1 Downloading dependency 135 of 216: perl:riscv64=5.40.1-7 Downloading dependency 136 of 216: sysvinit-utils:riscv64=3.15-6 Downloading dependency 137 of 216: file:riscv64=1:5.46-5+b1 Downloading dependency 138 of 216: python3-cykhash:riscv64=2.0.0-3+b4 Downloading dependency 139 of 216: gcc-15-base:riscv64=15.2.0-14 Downloading dependency 140 of 216: libpam0g:riscv64=1.7.0-5+b1 Downloading dependency 141 of 216: libpython3.14-minimal:riscv64=3.14.3-1 Downloading dependency 142 of 216: autotools-dev:riscv64=20240727.1 Downloading dependency 143 of 216: gcc:riscv64=4:15.2.0-5 Downloading dependency 144 of 216: libmount1:riscv64=2.41.3-4 Downloading dependency 145 of 216: libpython3-all-dev:riscv64=3.13.9-3 Downloading dependency 146 of 216: python3.14:riscv64=3.14.3-1 Downloading dependency 147 of 216: gcc-15-riscv64-linux-gnu:riscv64=15.2.0-14 Downloading dependency 148 of 216: libaudit1:riscv64=1:4.1.2-1+b1 Downloading dependency 149 of 216: libsystemd0:riscv64=260~rc2-1 Downloading dependency 150 of 216: libudev1:riscv64=260~rc2-1 Downloading dependency 151 of 216: libproc2-0:riscv64=2:4.0.4-9+b1 Downloading dependency 152 of 216: binutils-riscv64-linux-gnu:riscv64=2.46-2 Downloading dependency 153 of 216: libmagic-mgc:riscv64=1:5.46-5+b1 Downloading dependency 154 of 216: debhelper:riscv64=13.31 Downloading dependency 155 of 216: g++-15-riscv64-linux-gnu:riscv64=15.2.0-14 Downloading dependency 156 of 216: bzip2:riscv64=1.0.8-6+b1 Downloading dependency 157 of 216: libtsan2:riscv64=15.2.0-14 Downloading dependency 158 of 216: python3-minimal:riscv64=3.13.9-3 Downloading dependency 159 of 216: dh-autoreconf:riscv64=22 Downloading dependency 160 of 216: libattr1:riscv64=1:2.5.2-4 Downloading dependency 161 of 216: libuuid1:riscv64=2.41.3-4 Downloading dependency 162 of 216: libxml2-16:riscv64=2.15.1+dfsg-2+b1 Downloading dependency 163 of 216: perl-base:riscv64=5.40.1-7 Downloading dependency 164 of 216: patch:riscv64=2.8-2 Downloading dependency 165 of 216: python3-threadpoolctl:riscv64=3.1.0-1 Downloading dependency 166 of 216: base-passwd:riscv64=3.6.8 Downloading dependency 167 of 216: libqhull-r8.0:riscv64=2020.2-8 Downloading dependency 168 of 216: po-debconf:riscv64=1.0.22 Downloading dependency 169 of 216: python3.14-minimal:riscv64=3.14.3-1 Downloading dependency 170 of 216: cpp:riscv64=4:15.2.0-5 Downloading dependency 171 of 216: libarchive-zip-perl:riscv64=1.68-1 Downloading dependency 172 of 216: libgfortran5:riscv64=15.2.0-14 Downloading dependency 173 of 216: libgcc-s1:riscv64=15.2.0-14 Downloading dependency 174 of 216: libctf-nobfd0:riscv64=2.46-2 Downloading dependency 175 of 216: python3-hmmlearn:riscv64=0.3.2-3 Downloading dependency 176 of 216: zlib1g-dev:riscv64=1:1.3.dfsg+really1.3.1-3 Downloading dependency 177 of 216: base-files:riscv64=14 Downloading dependency 178 of 216: libcap-ng0:riscv64=0.9.1-1 Downloading dependency 179 of 216: libfile-stripnondeterminism-perl:riscv64=1.15.0-1 Downloading dependency 180 of 216: python3-pyproject-hooks:riscv64=1.2.0-1 Downloading dependency 181 of 216: libzstd1:riscv64=1.5.7+dfsg-3+b1 Downloading dependency 182 of 216: libgdbm6t64:riscv64=1.26-1+b1 Downloading dependency 183 of 216: cpp-15:riscv64=15.2.0-14 Downloading dependency 184 of 216: gcc-15:riscv64=15.2.0-14 Downloading dependency 185 of 216: python3-scipy:riscv64=1.16.3-4 Downloading dependency 186 of 216: libsframe3:riscv64=2.46-2 Downloading dependency 187 of 216: libgprofng0:riscv64=2.46-2 Downloading dependency 188 of 216: libaudit-common:riscv64=1:4.1.2-1 Downloading dependency 189 of 216: libjansson4:riscv64=2.14-2+b4 Downloading dependency 190 of 216: binutils:riscv64=2.46-2 Downloading dependency 191 of 216: libitm1:riscv64=15.2.0-14 Downloading dependency 192 of 216: python3-pkg-resources:riscv64=78.1.1-0.1 Downloading dependency 193 of 216: binutils-common:riscv64=2.46-2 Downloading dependency 194 of 216: libc6-dev:riscv64=2.42-13 Downloading dependency 195 of 216: dwz:riscv64=0.16-2 Downloading dependency 196 of 216: g++-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 197 of 216: intltool-debian:riscv64=0.35.0+20060710.6 Downloading dependency 198 of 216: libpython3.14-stdlib:riscv64=3.14.3-1 Downloading dependency 199 of 216: libpipeline1:riscv64=1.5.8-2 Downloading dependency 200 of 216: util-linux:riscv64=2.41.3-4 Downloading dependency 201 of 216: liblsan0:riscv64=15.2.0-14 Downloading dependency 202 of 216: netbase:riscv64=6.5 Downloading dependency 203 of 216: libacl1:riscv64=2.3.2-3 Downloading dependency 204 of 216: python3-sklearn-lib:riscv64=1.8.0+dfsg-3 Downloading dependency 205 of 216: libgomp1:riscv64=15.2.0-14 Downloading dependency 206 of 216: python3-wheel:riscv64=0.46.3-2 Downloading dependency 207 of 216: python3.13:riscv64=3.13.12-1 Downloading dependency 208 of 216: autoconf:riscv64=2.72-6 Downloading dependency 209 of 216: gcc-riscv64-linux-gnu:riscv64=4:15.2.0-5 Downloading dependency 210 of 216: libpython3.13-minimal:riscv64=3.13.12-1 Downloading dependency 211 of 216: diffutils:riscv64=1:3.12-1 Downloading dependency 212 of 216: libgmp10:riscv64=2:6.3.0+dfsg-5+b1 Downloading dependency 213 of 216: python3-setuptools:riscv64=78.1.1-0.1 Downloading dependency 214 of 216: g++-15:riscv64=15.2.0-14 Downloading dependency 215 of 216: libgdbm-compat4t64:riscv64=1.26-1+b1 Downloading dependency 216 of 216: libdebconfclient0:riscv64=0.282+b2 env --chdir=/srv/rebuilderd/tmp/rebuilderdfAhviR/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1772709900 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildifNXrb/debrebuild.sbuildrc.ldS0XlKrC6nr sbuild --build=riscv64 --host=riscv64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildifNXrb/debrebuild.tar.enzkDuSH8dfG --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=macs-3.0.2 /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on localhost +==============================================================================+ | macs 3.0.2-3 (riscv64) Fri, 06 Mar 2026 14:17:16 +0000 | +==============================================================================+ Package: macs Version: 3.0.2-3 Source Version: 3.0.2-3 Distribution: unstable Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildifNXrb/debrebuild.tar.enzkDuSH8dfG to /srv/rebuilderd/tmp/tmp.sbuild.TF6uL_dTQl... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Fri, 06 Mar 2026 14:18:12 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Fri, 06 Mar 2026 14:18:24 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-7MHeaB/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Fri, 06 Mar 2026 14:18:50 +0000 | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any) +------------------------------------------------------------------------------+ | Build environment Fri, 06 Mar 2026 14:18:52 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.73+deb13-riscv64 #1 SMP Debian 6.12.73-1 (2026-02-17) riscv64 (riscv64) Toolchain package versions: binutils_2.46-2 dpkg-dev_1.23.5 g++-15_15.2.0-14 gcc-15_15.2.0-14 libc6-dev_2.42-13 libstdc++-15-dev_15.2.0-14 libstdc++6_15.2.0-14 linux-libc-dev_6.18.15-1 Package versions: autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-2 bc_1.07.1-4 binutils_2.46-2 binutils-common_2.46-2 binutils-riscv64-linux-gnu_2.46-2 bsdextrautils_2.41.3-4 build-essential_12.12 bzip2_1.0.8-6+b1 ca-certificates_20260223 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-14 cpp-15-riscv64-linux-gnu_15.2.0-14 cpp-riscv64-linux-gnu_4:15.2.0-5 cython3_3.1.6+dfsg-2+b1 dash_0.5.12-12 debconf_1.5.92 debhelper_13.31 debianutils_5.23.2 dh-autoreconf_22 dh-python_7.20260125 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.23.5 dpkg-dev_1.23.5 dwz_0.16-2 file_1:5.46-5+b1 findutils_4.10.0-3 g++_4:15.2.0-5 g++-15_15.2.0-14 g++-15-riscv64-linux-gnu_15.2.0-14 g++-riscv64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-14 gcc-15-base_15.2.0-14 gcc-15-riscv64-linux-gnu_15.2.0-14 gcc-riscv64-linux-gnu_4:15.2.0-5 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 help2man_1.49.3+b1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-3 libarchive-zip-perl_1.68-1 libasan8_15.2.0-14 libatomic1_15.2.0-14 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46-2 libblas3_3.12.1-7+b1 libblkid1_2.41.3-4 libbz2-1.0_1.0.8-6+b1 libc-bin_2.42-13 libc-dev-bin_2.42-13 libc-gconv-modules-extra_2.42-13 libc6_2.42-13 libc6-dev_2.42-13 libcap-ng0_0.9.1-1 libcc1-0_15.2.0-14 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.46-2 libctf0_2.46-2 libdb5.3t64_5.3.28+dfsg2-11 libdebconfclient0_0.282+b2 libdebhelper-perl_13.31 libdpkg-perl_1.23.5 libelf1t64_0.194-1 libexpat1_2.7.4-1 libexpat1-dev_2.7.4-1 libffi8_3.5.2-3+b1 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-14 libgcc-s1_15.2.0-14 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgfortran5_15.2.0-14 libgmp10_2:6.3.0+dfsg-5+b1 libgomp1_15.2.0-14 libgprofng0_2.46-2 libisl23_0.27-1+b1 libitm1_15.2.0-14 libjansson4_2.14-2+b4 libjs-sphinxdoc_8.2.3-12 liblapack3_3.12.1-7+b1 liblocale-gettext-perl_1.07-8 liblsan0_15.2.0-14 liblzma5_5.8.2-2 libmagic-mgc_1:5.46-5+b1 libmagic1t64_1:5.46-5+b1 libmd0_1.1.0-2+b2 libmount1_2.41.3-4 libmpc3_1.3.1-2+b1 libmpfr6_4.2.2-2+b1 libncursesw6_6.6+20251231-1 libpam-modules_1.7.0-5+b1 libpam-modules-bin_1.7.0-5+b1 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5+b1 libpcre2-8-0_10.46-1+b1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libproc2-0_2:4.0.4-9+b1 libpython3-all-dev_3.13.9-3 libpython3-dev_3.13.9-3 libpython3-stdlib_3.13.9-3 libpython3.13_3.13.12-1 libpython3.13-dev_3.13.12-1 libpython3.13-minimal_3.13.12-1 libpython3.13-stdlib_3.13.12-1 libpython3.14_3.14.3-1 libpython3.14-dev_3.14.3-1 libpython3.14-minimal_3.14.3-1 libpython3.14-stdlib_3.14.3-1 libqhull-r8.0_2020.2-8 libreadline8t64_8.3-4 libselinux1_3.9-4+b1 libsframe3_2.46-2 libsimde-dev_0.8.4~rc3-5 libsmartcols1_2.41.3-4 libsqlite3-0_3.46.1-9+b1 libssl3t64_3.5.5-1 libstdc++-15-dev_15.2.0-14 libstdc++6_15.2.0-14 libsystemd0_260~rc2-1 libtinfo6_6.6+20251231-1 libtool_2.5.4-9 libtsan2_15.2.0-14 libubsan1_15.2.0-14 libuchardet0_0.0.8-2+b1 libudev1_260~rc2-1 libunistring5_1.3-2+b1 libuuid1_2.41.3-4 libxml2-16_2.15.1+dfsg-2+b1 libzstd1_1.5.7+dfsg-3+b1 linux-libc-dev_6.18.15-1 m4_1.4.21-1 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20260129-1 media-types_14.0.0 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 netbase_6.5 openssl_3.5.5-1 openssl-provider-legacy_3.5.5-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 procps_2:4.0.4-9+b1 pybuild-plugin-pyproject_7.20260125 python3_3.13.9-3 python3-all_3.13.9-3 python3-all-dev_3.13.9-3 python3-autocommand_2.2.2-4 python3-build_1.4.0-1 python3-cykhash_2.0.0-3+b4 python3-decorator_5.2.1-2 python3-dev_3.13.9-3 python3-hmmlearn_0.3.2-3 python3-inflect_7.5.0-1 python3-iniconfig_2.1.0-2 python3-installer_0.7.0+dfsg1-3 python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-joblib_1.5.2-1 python3-minimal_3.13.9-3 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-3 python3-numpy-dev_1:2.3.5+ds-3 python3-packaging_25.0-2 python3-pip_26.0.1+dfsg-1 python3-pkg-resources_78.1.1-0.1 python3-pluggy_1.6.0-2 python3-pygments_2.19.2+dfsg-1 python3-pyproject-hooks_1.2.0-1 python3-pytest_9.0.2-4 python3-scipy_1.16.3-4 python3-setuptools_78.1.1-0.1 python3-sklearn_1.8.0+dfsg-3 python3-sklearn-lib_1.8.0+dfsg-3 python3-threadpoolctl_3.1.0-1 python3-typeguard_4.4.4-2 python3-typing-extensions_4.15.0-2 python3-wheel_0.46.3-2 python3-zipp_3.23.0-1 python3.13_3.13.12-1 python3.13-dev_3.13.12-1 python3.13-minimal_3.13.12-1 python3.14_3.14.3-1 python3.14-dev_3.14.3-1 python3.14-minimal_3.14.3-1 readline-common_8.3-4 rpcsvc-proto_1.4.3-1+b2 sed_4.9-2 sensible-utils_0.0.26 sysvinit-utils_3.15-6 tar_1.35+dfsg-4 tzdata_2026a-1 util-linux_2.41.3-4 xz-utils_5.8.2-2 zlib1g_1:1.3.dfsg+really1.3.1-3 zlib1g-dev_1:1.3.dfsg+really1.3.1-3 +------------------------------------------------------------------------------+ | Build Fri, 06 Mar 2026 14:18:53 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: macs Binary: macs Architecture: any Version: 3.0.2-3 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Andreas Tille Homepage: https://github.com/taoliu/MACS/ Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/macs Vcs-Git: https://salsa.debian.org/med-team/macs.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc Package-List: macs deb science optional arch=any Checksums-Sha1: add8dce2a95862e95e94ada63a56f1035023163b 197484503 macs_3.0.2.orig.tar.gz 92538b054c9c48129fc8fe2beb58f8f6f46c9a71 1268004 macs_3.0.2-3.debian.tar.xz Checksums-Sha256: 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 197484503 macs_3.0.2.orig.tar.gz 8dc8389a7091127607d6805fb142c3985c9d128597e37d280b9ca334165bbae4 1268004 macs_3.0.2-3.debian.tar.xz Files: 2f1ec9ab99edddaf84958b65c305532e 197484503 macs_3.0.2.orig.tar.gz 02ff1a84293db56d180d889a5e532072 1268004 macs_3.0.2-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmmpaPIACgkQQc5/C58b izIPmwf/d79bhV3gTmY6aOFLpoKMxAAPDJ1hevNj7TvIzAeHC8vCR82Y2dttuhjp issL5ecNLpszVXr1jylpOgEVKLI1x/OIbi9rQ4w8EE5t4M1LUEEqvUALyUjyeGwA WJaQMAfDFR6DsQpEGe4/X/Gdm1b0wvZI4D37Gxl3pULNlNF0CPjoSCIVGR2VnbKB OJpSlfsiWwho7+l78vM+eCmvf49v2rDAGXgLk/ERlaVx3u/cxwKmNFERiPOOOVUE ivLR3W7RBG6WMjPbU/htNRpcVDXJ/eRLrI1L1aVwfaU5212fcKDKcqdN5rTJCUPQ qGXKPJxDIKfr3y974+rRODtqdVFtlQ== =x9B0 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./macs_3.0.2-3.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./macs_3.0.2-3.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting macs in /build/reproducible-path/macs-3.0.2 dpkg-source: info: unpacking macs_3.0.2.orig.tar.gz dpkg-source: info: unpacking macs_3.0.2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying keep_debug dpkg-source: info: applying simde.patch dpkg-source: info: applying long_is_not_defined.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1772709900 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 3.0.2-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' for pyx in $(find MACS3/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" module I: pybuild base:384: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3 * Building wheel... Compiling MACS3/Signal/HMMR_EM.pyx because it changed. Compiling MACS3/Signal/HMMR_Signal_Processing.pyx because it changed. Compiling MACS3/Signal/HMMR_HMM.pyx because it changed. Compiling MACS3/Signal/Prob.pyx because it changed. Compiling MACS3/Signal/Region.pyx because it changed. Compiling MACS3/Signal/Pileup.pyx because it changed. Compiling MACS3/Signal/PileupV2.pyx because it changed. Compiling MACS3/Signal/PeakModel.pyx because it changed. Compiling MACS3/Signal/PeakDetect.pyx because it changed. Compiling MACS3/Signal/SignalProcessing.pyx because it changed. Compiling MACS3/Signal/FixWidthTrack.pyx because it changed. Compiling MACS3/Signal/PairedEndTrack.pyx because it changed. Compiling MACS3/Signal/BedGraph.pyx because it changed. Compiling MACS3/Signal/ScoreTrack.pyx because it changed. Compiling MACS3/Signal/CallPeakUnit.pyx because it changed. Compiling MACS3/Signal/VariantStat.pyx because it changed. Compiling MACS3/Signal/ReadAlignment.pyx because it changed. Compiling MACS3/Signal/RACollection.pyx because it changed. Compiling MACS3/Signal/UnitigRACollection.pyx because it changed. Compiling MACS3/Signal/PosReadsInfo.pyx because it changed. Compiling MACS3/Signal/PeakVariants.pyx because it changed. Compiling MACS3/IO/Parser.pyx because it changed. Compiling MACS3/IO/PeakIO.pyx because it changed. Compiling MACS3/IO/BedGraphIO.pyx because it changed. Compiling MACS3/IO/BAM.pyx because it changed. [ 1/25] Cythonizing MACS3/IO/BAM.pyx [ 2/25] Cythonizing MACS3/IO/BedGraphIO.pyx [ 3/25] Cythonizing MACS3/IO/Parser.pyx [ 4/25] Cythonizing MACS3/IO/PeakIO.pyx [ 5/25] Cythonizing MACS3/Signal/BedGraph.pyx [ 6/25] Cythonizing MACS3/Signal/CallPeakUnit.pyx [ 7/25] Cythonizing MACS3/Signal/FixWidthTrack.pyx [ 8/25] Cythonizing MACS3/Signal/HMMR_EM.pyx [ 9/25] Cythonizing MACS3/Signal/HMMR_HMM.pyx [10/25] Cythonizing MACS3/Signal/HMMR_Signal_Processing.pyx [11/25] Cythonizing MACS3/Signal/PairedEndTrack.pyx [12/25] Cythonizing MACS3/Signal/PeakDetect.pyx [13/25] Cythonizing MACS3/Signal/PeakModel.pyx [14/25] Cythonizing MACS3/Signal/PeakVariants.pyx [15/25] Cythonizing MACS3/Signal/Pileup.pyx [16/25] Cythonizing MACS3/Signal/PileupV2.pyx [17/25] Cythonizing MACS3/Signal/PosReadsInfo.pyx [18/25] Cythonizing MACS3/Signal/Prob.pyx [19/25] Cythonizing MACS3/Signal/RACollection.pyx [20/25] Cythonizing MACS3/Signal/ReadAlignment.pyx [21/25] Cythonizing MACS3/Signal/Region.pyx [22/25] Cythonizing MACS3/Signal/ScoreTrack.pyx [23/25] Cythonizing MACS3/Signal/SignalProcessing.pyx [24/25] Cythonizing MACS3/Signal/UnitigRACollection.pyx [25/25] Cythonizing MACS3/Signal/VariantStat.pyx /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-riscv64-cpython-314/MACS3 copying MACS3/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3 creating build/lib.linux-riscv64-cpython-314/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-riscv64-cpython-314/MACS3/IO creating build/lib.linux-riscv64-cpython-314/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Signal creating build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-riscv64-cpython-314/MACS3/Commands creating build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-riscv64-cpython-314/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-riscv64-cpython-314/MACS3/Signal building 'MACS3.Signal.HMMR_HMM' extension building 'MACS3.Signal.HMMR_Signal_Processing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.o -w -O3 building 'MACS3.Signal.Prob' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Prob.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Prob.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.Region' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Region.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Region.o -w -O3 building 'MACS3.Signal.Pileup' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Pileup.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/Pileup.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Prob.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PileupV2.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.o -w -O3 building 'MACS3.Signal.PeakModel' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakModel.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Region.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/cPosValCalculation.o -w -O3 building 'MACS3.Signal.SignalProcessing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/Pileup.o build/temp.linux-riscv64-cpython-314/MACS3/Signal/cPosValCalculation.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.o -w -O3 building 'MACS3.Signal.BedGraph' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/BedGraph.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/VariantStat.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/RACollection.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.o -w -O3 building 'MACS3.Signal.PosReadsInfo' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/swalign.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP building 'MACS3.Signal.PeakVariants' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/htab.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP building 'MACS3.IO.Parser' extension creating build/temp.linux-riscv64-cpython-314/MACS3/IO riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/Parser.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/Parser.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mag.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/misc.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rle.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rope.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/RACollection.o build/temp.linux-riscv64-cpython-314/MACS3/Signal/swalign.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bfc.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bseq.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/bubble.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/htab.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/ksw.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/kthread.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mag.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/misc.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/mrope.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rld0.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rle.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/rope.o build/temp.linux-riscv64-cpython-314/MACS3/fermi-lite/unitig.o -L/usr/lib/riscv64-linux-gnu -lm -lz -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.PeakIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/PeakIO.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/PeakIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.o -w -O3 building 'MACS3.IO.BAM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/BAM.c -o build/temp.linux-riscv64-cpython-314/MACS3/IO/BAM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/BAM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-314/MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/Parser.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-314/MACS3/IO/PeakIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-314/MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so running build_scripts creating build/scripts-3.14 copying and adjusting bin/macs3 -> build/scripts-3.14 changing mode of build/scripts-3.14/macs3 from 644 to 755 installing to build/bdist.linux-riscv64/wheel running install running install_lib creating build/bdist.linux-riscv64/wheel creating build/bdist.linux-riscv64/wheel/MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-314/MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal creating build/bdist.linux-riscv64/wheel/MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-314/MACS3/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/OptValidator.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/Constants.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-314/MACS3/Utilities/Logger.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities creating build/bdist.linux-riscv64/wheel/MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/OutputWriter.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-314/MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO running install_egg_info running egg_info creating MACS3.egg-info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt writing manifest file 'MACS3.egg-info/SOURCES.txt' dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-riscv64/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.14/macs3 -> build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/.tmp-wmxjtag5/macs3-3.0.2-cp314-cp314-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-314-riscv64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-riscv64/wheel Successfully built macs3-3.0.2-cp314-cp314-linux_riscv64.whl I: pybuild plugin_pyproject:168: Unpacking wheel built for python3.14 with "installer" module I: pybuild plugin_pyproject:142: Building wheel for python3.13 with "build" module I: pybuild base:384: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3 * Building wheel... /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-riscv64-cpython-313/MACS3 copying MACS3/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3 creating build/lib.linux-riscv64-cpython-313/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-riscv64-cpython-313/MACS3/IO creating build/lib.linux-riscv64-cpython-313/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Signal creating build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-riscv64-cpython-313/MACS3/Commands creating build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-riscv64-cpython-313/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension building 'MACS3.Signal.HMMR_Signal_Processing' extension creating build/temp.linux-riscv64-cpython-313/MACS3/Signal building 'MACS3.Signal.HMMR_HMM' extension building 'MACS3.Signal.Prob' extension creating build/temp.linux-riscv64-cpython-313/MACS3/Signal creating build/temp.linux-riscv64-cpython-313/MACS3/Signal riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Prob.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Prob.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.Region' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Region.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Region.o -w -O3 building 'MACS3.Signal.Pileup' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Pileup.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/Pileup.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Prob.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PileupV2.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.o -w -O3 building 'MACS3.Signal.PeakModel' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakModel.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Region.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/cPosValCalculation.o -w -O3 building 'MACS3.Signal.SignalProcessing' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/Pileup.o build/temp.linux-riscv64-cpython-313/MACS3/Signal/cPosValCalculation.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.o -w -O3 building 'MACS3.Signal.BedGraph' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/BedGraph.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/VariantStat.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/RACollection.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.o -w -O3 building 'MACS3.Signal.PosReadsInfo' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/swalign.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP building 'MACS3.Signal.PeakVariants' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/htab.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP building 'MACS3.IO.Parser' extension creating build/temp.linux-riscv64-cpython-313/MACS3/IO riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/Parser.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/Parser.o -w -O3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mag.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/misc.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rle.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rope.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/RACollection.o build/temp.linux-riscv64-cpython-313/MACS3/Signal/swalign.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bfc.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bseq.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/bubble.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/htab.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/ksw.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/kthread.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mag.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/misc.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/mrope.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rld0.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rle.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/rope.o build/temp.linux-riscv64-cpython-313/MACS3/fermi-lite/unitig.o -L/usr/lib/riscv64-linux-gnu -lm -lz -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.PeakIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/PeakIO.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/PeakIO.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.o -w -O3 building 'MACS3.IO.BAM' extension riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/BAM.c -o build/temp.linux-riscv64-cpython-313/MACS3/IO/BAM.o -w -O3 riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/Parser.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/BAM.o -L/usr/lib/riscv64-linux-gnu -lm -o build/lib.linux-riscv64-cpython-313/MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so riscv64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-riscv64-cpython-313/MACS3/IO/PeakIO.o -L/usr/lib/riscv64-linux-gnu -o build/lib.linux-riscv64-cpython-313/MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so running build_scripts creating build/scripts-3.13 copying and adjusting bin/macs3 -> build/scripts-3.13 changing mode of build/scripts-3.13/macs3 from 644 to 755 installing to build/bdist.linux-riscv64/wheel running install running install_lib creating build/bdist.linux-riscv64/wheel creating build/bdist.linux-riscv64/wheel/MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal copying build/lib.linux-riscv64-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/Signal creating build/bdist.linux-riscv64/wheel/MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-riscv64/wheel/./MACS3/Commands copying build/lib.linux-riscv64-cpython-313/MACS3/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3 creating build/bdist.linux-riscv64/wheel/MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/OptValidator.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/Constants.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities copying build/lib.linux-riscv64-cpython-313/MACS3/Utilities/Logger.py -> build/bdist.linux-riscv64/wheel/./MACS3/Utilities creating build/bdist.linux-riscv64/wheel/MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/__init__.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/OutputWriter.py -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO copying build/lib.linux-riscv64-cpython-313/MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/./MACS3/IO running install_egg_info running egg_info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/riscv64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-riscv64/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.13/macs3 -> build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-riscv64/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-riscv64/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/.tmp-d8ls6lg1/macs3-3.0.2-cp313-cp313-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-313-riscv64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-riscv64/wheel Successfully built macs3-3.0.2-cp313-cp313-linux_riscv64.whl I: pybuild plugin_pyproject:168: Unpacking wheel built for python3.13 with "installer" module PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info \ --name "macs3 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs3" > debian/macs3.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmac3_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs3_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info --version-string="3.0.2" \ --include debian/macs3_${subcommand}-man-include \ "python3 bin/macs3 ${subcommand}" > \ debian/macs3_${subcommand}.1; done make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_auto_test I: pybuild base:384: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build; python3.14 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.14.3, pytest-9.0.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ================== 65 passed, 3 skipped in 104.32s (0:01:44) =================== I: pybuild base:384: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build; python3.13 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.13.12, pytest-9.0.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ================== 65 passed, 3 skipped in 106.89s (0:01:46) =================== cd test && for PY3VER in 3.14 3.13; do \ export PATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/scripts:$PATH \ && export PYTHONPATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/build \ && ./cmdlinetest macs3.0.2-3-${PY3VER} ; done 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-3-3.14_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-3-3.14_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-3-3.14_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-3-3.14_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-3-3.14_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-3-3.14_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:13:22 Max mem (KB): 294964 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-3-3.13_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-3-3.13_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-3-3.13_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-3-3.13_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-3-3.13_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-3-3.13_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-3-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:14:09 Max mem (KB): 297312 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install --destdir=debian/macs/ -a -O--buildsystem=pybuild I: pybuild plugin_pyproject:199: Copying package built for python3.14 to destdir I: pybuild plugin_pyproject:199: Copying package built for python3.13 to destdir dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild debian/rules execute_before_dh_python3 make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' dh_python3 -a -O--buildsystem=pybuild I: dh_python3 tools:128: replacing shebang in debian/macs/usr/bin/macs3 dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_3.0.2-3_riscv64.deb'. dpkg-deb: building package 'macs' in '../macs_3.0.2-3_riscv64.deb'. dpkg-genbuildinfo --build=any -O../macs_3.0.2-3_riscv64.buildinfo dpkg-genchanges --build=any -O../macs_3.0.2-3_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-03-06T18:56:49Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Fri, 06 Mar 2026 18:56:54 +0000 | +------------------------------------------------------------------------------+ macs_3.0.2-3_riscv64.changes: ----------------------------- Format: 1.8 Date: Thu, 05 Mar 2026 12:25:00 +0100 Source: macs Binary: macs macs-dbgsym Architecture: riscv64 Version: 3.0.2-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Santiago Vila Description: macs - Model-based Analysis of ChIP-Seq on short reads sequencers Closes: 1047612 Changes: macs (3.0.2-3) unstable; urgency=medium . * Team upload. * Fix clean target. Closes: #1047612. * Drop "Priority: optional" (default). * Update standards-version. * Simplify and fine-tune salsa-ci.yml. * Drop unused lintian overrides. Checksums-Sha1: 111e9eb2ef526cad010c18c62f23bfb64a2446c6 28362044 macs-dbgsym_3.0.2-3_riscv64.deb 4bb371d50261d5ff44255b298cf0b9395de48951 7138 macs_3.0.2-3_riscv64.buildinfo 46b2a035e78e4f4ee121a9b85b5fd7787ab6a044 4213124 macs_3.0.2-3_riscv64.deb Checksums-Sha256: 74b7536ecf6d746bca7dace2780654c26fe346ac36471d8f169d9b4b398c1482 28362044 macs-dbgsym_3.0.2-3_riscv64.deb 877d17db530fef1271fbfa1b19f1b4051dc06dbfb3492e9858026e3ba9d17830 7138 macs_3.0.2-3_riscv64.buildinfo 3959788ea3f0ca9e0148fa7cd59f818fe7fd597275128faeee310c37faeda53f 4213124 macs_3.0.2-3_riscv64.deb Files: 3dc582e5b8244238e121a972c0e02080 28362044 debug optional macs-dbgsym_3.0.2-3_riscv64.deb bf36372f3ecc2fb912c1dddd1d88a287 7138 science optional macs_3.0.2-3_riscv64.buildinfo 455ac267aa16806b59f24c82bec63278 4213124 science optional macs_3.0.2-3_riscv64.deb +------------------------------------------------------------------------------+ | Buildinfo Fri, 06 Mar 2026 18:56:58 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: macs Binary: macs macs-dbgsym Architecture: riscv64 Version: 3.0.2-3 Checksums-Md5: 3dc582e5b8244238e121a972c0e02080 28362044 macs-dbgsym_3.0.2-3_riscv64.deb 455ac267aa16806b59f24c82bec63278 4213124 macs_3.0.2-3_riscv64.deb Checksums-Sha1: 111e9eb2ef526cad010c18c62f23bfb64a2446c6 28362044 macs-dbgsym_3.0.2-3_riscv64.deb 46b2a035e78e4f4ee121a9b85b5fd7787ab6a044 4213124 macs_3.0.2-3_riscv64.deb Checksums-Sha256: 74b7536ecf6d746bca7dace2780654c26fe346ac36471d8f169d9b4b398c1482 28362044 macs-dbgsym_3.0.2-3_riscv64.deb 3959788ea3f0ca9e0148fa7cd59f818fe7fd597275128faeee310c37faeda53f 4213124 macs_3.0.2-3_riscv64.deb Build-Origin: Debian Build-Architecture: riscv64 Build-Date: Fri, 06 Mar 2026 18:56:44 +0000 Build-Path: /build/reproducible-path/macs-3.0.2 Installed-Build-Depends: autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-2), bc (= 1.07.1-4), binutils (= 2.46-2), binutils-common (= 2.46-2), binutils-riscv64-linux-gnu (= 2.46-2), bsdextrautils (= 2.41.3-4), build-essential (= 12.12), bzip2 (= 1.0.8-6+b1), ca-certificates (= 20260223), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-15 (= 15.2.0-14), cpp-15-riscv64-linux-gnu (= 15.2.0-14), cpp-riscv64-linux-gnu (= 4:15.2.0-5), cython3 (= 3.1.6+dfsg-2+b1), dash (= 0.5.12-12), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2), dh-autoreconf (= 22), dh-python (= 7.20260125), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.23.5), dpkg-dev (= 1.23.5), dwz (= 0.16-2), file (= 1:5.46-5+b1), findutils (= 4.10.0-3), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-14), g++-15-riscv64-linux-gnu (= 15.2.0-14), g++-riscv64-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-15 (= 15.2.0-14), gcc-15-base (= 15.2.0-14), gcc-15-riscv64-linux-gnu (= 15.2.0-14), gcc-riscv64-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), help2man (= 1.49.3+b1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-14), libatomic1 (= 15.2.0-14), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46-2), libblas3 (= 3.12.1-7+b1), libblkid1 (= 2.41.3-4), libbz2-1.0 (= 1.0.8-6+b1), libc-bin (= 2.42-13), libc-dev-bin (= 2.42-13), libc-gconv-modules-extra (= 2.42-13), libc6 (= 2.42-13), libc6-dev (= 2.42-13), libcap-ng0 (= 0.9.1-1), libcc1-0 (= 15.2.0-14), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.46-2), libctf0 (= 2.46-2), libdb5.3t64 (= 5.3.28+dfsg2-11), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.31), libdpkg-perl (= 1.23.5), libelf1t64 (= 0.194-1), libexpat1 (= 2.7.4-1), libexpat1-dev (= 2.7.4-1), libffi8 (= 3.5.2-3+b1), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-14), libgcc-s1 (= 15.2.0-14), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libgfortran5 (= 15.2.0-14), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgomp1 (= 15.2.0-14), libgprofng0 (= 2.46-2), libisl23 (= 0.27-1+b1), libitm1 (= 15.2.0-14), libjansson4 (= 2.14-2+b4), libjs-sphinxdoc (= 8.2.3-12), liblapack3 (= 3.12.1-7+b1), liblocale-gettext-perl (= 1.07-8), liblsan0 (= 15.2.0-14), liblzma5 (= 5.8.2-2), libmagic-mgc (= 1:5.46-5+b1), libmagic1t64 (= 1:5.46-5+b1), libmd0 (= 1.1.0-2+b2), libmount1 (= 2.41.3-4), libmpc3 (= 1.3.1-2+b1), libmpfr6 (= 4.2.2-2+b1), libncursesw6 (= 6.6+20251231-1), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5+b1), libpcre2-8-0 (= 10.46-1+b1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libproc2-0 (= 2:4.0.4-9+b1), libpython3-all-dev (= 3.13.9-3), libpython3-dev (= 3.13.9-3), libpython3-stdlib (= 3.13.9-3), libpython3.13 (= 3.13.12-1), libpython3.13-dev (= 3.13.12-1), libpython3.13-minimal (= 3.13.12-1), libpython3.13-stdlib (= 3.13.12-1), libpython3.14 (= 3.14.3-1), libpython3.14-dev (= 3.14.3-1), libpython3.14-minimal (= 3.14.3-1), libpython3.14-stdlib (= 3.14.3-1), libqhull-r8.0 (= 2020.2-8), libreadline8t64 (= 8.3-4), libselinux1 (= 3.9-4+b1), libsframe3 (= 2.46-2), libsimde-dev (= 0.8.4~rc3-5), libsmartcols1 (= 2.41.3-4), libsqlite3-0 (= 3.46.1-9+b1), libssl3t64 (= 3.5.5-1), libstdc++-15-dev (= 15.2.0-14), libstdc++6 (= 15.2.0-14), libsystemd0 (= 260~rc2-1), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-9), libtsan2 (= 15.2.0-14), libubsan1 (= 15.2.0-14), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260~rc2-1), libunistring5 (= 1.3-2+b1), libuuid1 (= 2.41.3-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libzstd1 (= 1.5.7+dfsg-3+b1), linux-libc-dev (= 6.18.15-1), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260129-1), media-types (= 14.0.0), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), openssl (= 3.5.5-1), openssl-provider-legacy (= 3.5.5-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.22), procps (= 2:4.0.4-9+b1), pybuild-plugin-pyproject (= 7.20260125), python3 (= 3.13.9-3), python3-all (= 3.13.9-3), python3-all-dev (= 3.13.9-3), python3-autocommand (= 2.2.2-4), python3-build (= 1.4.0-1), python3-cykhash (= 2.0.0-3+b4), python3-decorator (= 5.2.1-2), python3-dev (= 3.13.9-3), python3-hmmlearn (= 0.3.2-3), python3-inflect (= 7.5.0-1), python3-iniconfig (= 2.1.0-2), python3-installer (= 0.7.0+dfsg1-3), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-joblib (= 1.5.2-1), python3-minimal (= 3.13.9-3), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-3), python3-numpy-dev (= 1:2.3.5+ds-3), python3-packaging (= 25.0-2), python3-pip (= 26.0.1+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-pluggy (= 1.6.0-2), python3-pygments (= 2.19.2+dfsg-1), python3-pyproject-hooks (= 1.2.0-1), python3-pytest (= 9.0.2-4), python3-scipy (= 1.16.3-4), python3-setuptools (= 78.1.1-0.1), python3-sklearn (= 1.8.0+dfsg-3), python3-sklearn-lib (= 1.8.0+dfsg-3), python3-threadpoolctl (= 3.1.0-1), python3-typeguard (= 4.4.4-2), python3-typing-extensions (= 4.15.0-2), python3-wheel (= 0.46.3-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.12-1), python3.13-dev (= 3.13.12-1), python3.13-minimal (= 3.13.12-1), python3.14 (= 3.14.3-1), python3.14-dev (= 3.14.3-1), python3.14-minimal (= 3.14.3-1), readline-common (= 8.3-4), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2), sensible-utils (= 0.0.26), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-4), tzdata (= 2026a-1), util-linux (= 2.41.3-4), xz-utils (= 5.8.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-3) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1772709900" +------------------------------------------------------------------------------+ | Package contents Fri, 06 Mar 2026 18:56:58 +0000 | +------------------------------------------------------------------------------+ macs-dbgsym_3.0.2-3_riscv64.deb ------------------------------- new Debian package, version 2.0. size 28362044 bytes: control archive=2860 bytes. 2371 bytes, 12 lines control 5382 bytes, 51 lines md5sums Package: macs-dbgsym Source: macs Version: 3.0.2-3 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 29362 Depends: macs (= 3.0.2-3) Section: debug Priority: optional Description: debug symbols for macs Build-Ids: 00f318ea99bb0e3fd00fb4ab3b3480d0aad6c900 023846555a72cf15aac4bdadea327f648d68d5fb 038632c75df6c4e109bd71323253ec6462a77731 05e2e638c3cd92ff4271ddaf8a0620c1bd7bbb48 0ae4335fba2d7d2dd73ac70590912065baa6dc42 0c152eac13f5da2887ee56b5e6fa66b2ee36a9a3 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2.0. size 4213124 bytes: control archive=3856 bytes. 1088 bytes, 18 lines control 10195 bytes, 100 lines md5sums 267 bytes, 12 lines * postinst #!/bin/sh 405 bytes, 12 lines * prerm #!/bin/sh Package: macs Version: 3.0.2-3 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 11775 Depends: python3-numpy2-abi0 | python3-numpy-abi9, python3 (<< 3.15), python3 (>= 3.13~), python3-cykhash, python3-hmmlearn, python3-numpy, python3-scipy, python3-sklearn, python3:any, libc6 (>= 2.38), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/taoliu/MACS/ Description: Model-based Analysis of ChIP-Seq on short reads sequencers MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples. drwxr-xr-x root/root 0 2026-03-05 11:25 ./ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/bin/ -rwxr-xr-x root/root 97279 2026-03-05 11:25 ./usr/bin/macs3 drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/lib/ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/lib/python3/dist-packages/MACS3/ drwxr-xr-x root/root 0 2026-03-05 11:25 ./usr/lib/python3/dist-packages/MACS3/Commands/ -rw-r--r-- root/root 0 2026-03-05 11:25 ./usr/lib/python3/dist-packages/MACS3/Commands/__init__.py -rw-r--r-- root/root 1875 2026-03-05 11:25 ./usr/lib/python3/dist-packages/MACS3/Commands/bdgbroadcall_cmd.py -rw-r--r-- root/root 3453 2026-03-05 11:25 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./usr/share/man/man1/macs3_randsample.1.gz -rw-r--r-- root/root 1360 2026-03-05 11:25 ./usr/share/man/man1/macs3_refinepeak.1.gz +------------------------------------------------------------------------------+ | Post Build Fri, 06 Mar 2026 18:57:08 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Fri, 06 Mar 2026 18:57:08 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Fri, 06 Mar 2026 18:57:26 +0000 | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 3610904 Build-Time: 16636 Distribution: unstable Host Architecture: riscv64 Install-Time: 26 Job: /srv/rebuilderd/tmp/rebuilderdfAhviR/inputs/macs_3.0.2-3.dsc Machine Architecture: riscv64 Package: macs Package-Time: 16773 Source-Version: 3.0.2-3 Space: 3610904 Status: successful Version: 3.0.2-3 -------------------------------------------------------------------------------- Finished at 2026-03-06T18:56:49Z Build needed 04:39:33, 3610904k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdfAhviR/out checking macs-dbgsym_3.0.2-3_riscv64.deb: size differs for macs-dbgsym_3.0.2-3_riscv64.deb